RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 DZIP1LQ8IYY4 767 aaKnown RBP16.79■□□□□ 0.28
ACTN4-205ENST00000477174 AGBL3Q8NEM8 1001 aa16.79■□□□□ 0.28
ACTN4-205ENST00000477174 FBXO3Q9UK99 471 aa16.79■□□□□ 0.28
ACTN4-205ENST00000477174 TNNQ9UQP3 1299 aa16.79■□□□□ 0.28
ACTN4-205ENST00000477174 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
ACTN4-205ENST00000477174 SNAP23O00161 211 aa16.78■□□□□ 0.28
ACTN4-205ENST00000477174 TMEM57Q8N5G2 664 aa16.78■□□□□ 0.28
ACTN4-205ENST00000477174 CEP350Q5VT06 3117 aa16.78■□□□□ 0.28
ACTN4-205ENST00000477174 IRS2Q9Y4H2 1338 aa16.77■□□□□ 0.28
ACTN4-205ENST00000477174 EYA2O00167 538 aa16.77■□□□□ 0.28
ACTN4-205ENST00000477174 GNAI2P04899 355 aa16.77■□□□□ 0.28
ACTN4-205ENST00000477174 MS4A1P11836 297 aa16.77■□□□□ 0.28
ACTN4-205ENST00000477174 KLRK1P26718 216 aa16.77■□□□□ 0.28
ACTN4-205ENST00000477174 PTPN12Q05209 780 aaKnown RBP16.77■□□□□ 0.28
ACTN4-205ENST00000477174 LRRC24Q50LG9 513 aa16.77■□□□□ 0.28
ACTN4-205ENST00000477174 STRIP1Q5VSL9 837 aa16.77■□□□□ 0.28
ACTN4-205ENST00000477174 RSBN1LQ6PCB5 846 aaPredicted RBP16.77■□□□□ 0.28
ACTN4-205ENST00000477174 MICALL2Q8IY33 904 aa16.77■□□□□ 0.28
ACTN4-205ENST00000477174 KLHDC4Q8TBB5 520 aa16.77■□□□□ 0.28
ACTN4-205ENST00000477174 ZC3H15Q8WU90 426 aaKnown RBP16.77■□□□□ 0.28
ACTN4-205ENST00000477174 CD209Q9NNX6 404 aa16.77■□□□□ 0.28
ACTN4-205ENST00000477174 RCAN3Q9UKA8 241 aa16.77■□□□□ 0.28
ACTN4-205ENST00000477174 PDE8BO95263 885 aa16.76■□□□□ 0.27
ACTN4-205ENST00000477174 ITGBL1O95965 494 aaPredicted RBP16.76■□□□□ 0.27
ACTN4-205ENST00000477174 MTX1Q13505 466 aa16.76■□□□□ 0.27
ACTN4-205ENST00000477174 METTL24Q5JXM2 366 aa16.76■□□□□ 0.27
ACTN4-205ENST00000477174 ZNF804AQ7Z570 1209 aa16.76■□□□□ 0.27
ACTN4-205ENST00000477174 CNTROBQ8N137 903 aa16.76■□□□□ 0.27
ACTN4-205ENST00000477174 GMLQ99445 158 aa16.76■□□□□ 0.27
ACTN4-205ENST00000477174 PGAP2Q9UHJ9 254 aa16.76■□□□□ 0.27
ACTN4-205ENST00000477174 CIAO1O76071 339 aa16.75■□□□□ 0.27
ACTN4-205ENST00000477174 MMP14P50281 582 aa16.75■□□□□ 0.27
ACTN4-205ENST00000477174 DACT2Q5SW24 774 aa16.75■□□□□ 0.27
ACTN4-205ENST00000477174 TTLL5Q6EMB2 1281 aa16.75■□□□□ 0.27
ACTN4-205ENST00000477174 COPRSQ9NQ92 184 aa16.75■□□□□ 0.27
ACTN4-205ENST00000477174 ZNF609O15014 1411 aa16.74■□□□□ 0.27
ACTN4-205ENST00000477174 ZBTB7BO15156 539 aaPredicted RBP16.74■□□□□ 0.27
ACTN4-205ENST00000477174 USP17L8P0C7I0 530 aa16.74■□□□□ 0.27
ACTN4-205ENST00000477174 RLBP1P12271 317 aa16.74■□□□□ 0.27
ACTN4-205ENST00000477174 IL1R1P14778 569 aa16.74■□□□□ 0.27
ACTN4-205ENST00000477174 HIRAP54198 1017 aaPredicted RBP16.74■□□□□ 0.27
ACTN4-205ENST00000477174 ZNF280AP59817 542 aaPredicted RBP16.74■□□□□ 0.27
ACTN4-205ENST00000477174 MAP1SQ66K74 1059 aaPredicted RBP16.74■□□□□ 0.27
ACTN4-205ENST00000477174 VGLL2Q8N8G2 317 aa16.74■□□□□ 0.27
ACTN4-205ENST00000477174 MYO3BQ8WXR4 1341 aa16.73■□□□□ 0.27
ACTN4-205ENST00000477174 SHTN1A0MZ66 631 aa16.73■□□□□ 0.27
ACTN4-205ENST00000477174 SRGAP3O43295 1099 aa16.73■□□□□ 0.27
ACTN4-205ENST00000477174 SASH1O94885 1247 aa16.73■□□□□ 0.27
ACTN4-205ENST00000477174 HIBADHP31937 336 aaKnown RBP16.73■□□□□ 0.27
ACTN4-205ENST00000477174 ATG9AQ7Z3C6 839 aa16.73■□□□□ 0.27
ACTN4-205ENST00000477174 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
ACTN4-205ENST00000477174 FAM84BQ96KN1 310 aaPredicted RBP16.73■□□□□ 0.27
ACTN4-205ENST00000477174 PASKQ96RG2 1323 aa16.72■□□□□ 0.27
ACTN4-205ENST00000477174 IL15P40933 162 aaPredicted RBP16.72■□□□□ 0.27
ACTN4-205ENST00000477174 GTF2IP78347 998 aa16.72■□□□□ 0.27
ACTN4-205ENST00000477174 PUM3Q15397 648 aaKnown RBP16.72■□□□□ 0.27
ACTN4-205ENST00000477174 SAMD7Q7Z3H4 446 aa16.72■□□□□ 0.27
ACTN4-205ENST00000477174 OGFOD1Q8N543 542 aa16.72■□□□□ 0.27
ACTN4-205ENST00000477174 TRPM4Q8TD43 1214 aa16.72■□□□□ 0.27
ACTN4-205ENST00000477174 CEP126Q9P2H0 1117 aa16.72■□□□□ 0.27
ACTN4-205ENST00000477174 IFIT1P09914 478 aaKnown RBP16.71■□□□□ 0.27
ACTN4-205ENST00000477174 TBC1D10BQ4KMP7 808 aaPredicted RBP16.71■□□□□ 0.27
ACTN4-205ENST00000477174 CAVIN4Q5BKX8 364 aa16.71■□□□□ 0.27
ACTN4-205ENST00000477174 FBXO33Q7Z6M2 555 aa16.71■□□□□ 0.27
ACTN4-205ENST00000477174 TDRD7Q8NHU6 1098 aaKnown RBP16.71■□□□□ 0.27
ACTN4-205ENST00000477174 FBXW7Q969H0 707 aa16.71■□□□□ 0.27
ACTN4-205ENST00000477174 SIL1Q9H173 461 aa16.71■□□□□ 0.27
ACTN4-205ENST00000477174 SPEF2Q9C093 1822 aa16.7■□□□□ 0.26
ACTN4-205ENST00000477174 FGFR2P21802 821 aa16.7■□□□□ 0.26
ACTN4-205ENST00000477174 GYG1P46976 350 aa16.7■□□□□ 0.26
ACTN4-205ENST00000477174 FKBP1AP62942 108 aaKnown RBP16.7■□□□□ 0.26
ACTN4-205ENST00000477174 RBM26Q5T8P6 1007 aaKnown RBP16.7■□□□□ 0.26
ACTN4-205ENST00000477174 VPS37DQ86XT2 251 aa16.7■□□□□ 0.26
ACTN4-205ENST00000477174 DNAJC5GQ8N7S2 189 aa16.7■□□□□ 0.26
ACTN4-205ENST00000477174 PANK1Q8TE04 598 aa16.7■□□□□ 0.26
ACTN4-205ENST00000477174 LPIN2Q92539 896 aa16.7■□□□□ 0.26
ACTN4-205ENST00000477174 EGFRP00533 1210 aa16.69■□□□□ 0.26
ACTN4-205ENST00000477174 ATP8B2P98198 1209 aa16.69■□□□□ 0.26
ACTN4-205ENST00000477174 KIF4BQ2VIQ3 1234 aa16.69■□□□□ 0.26
ACTN4-205ENST00000477174 CDC37L1Q7L3B6 337 aa16.69■□□□□ 0.26
ACTN4-205ENST00000477174 MXD3Q9BW11 206 aa16.69■□□□□ 0.26
ACTN4-205ENST00000477174 MYOZ2Q9NPC6 264 aa16.69■□□□□ 0.26
ACTN4-205ENST00000477174 CREBZFQ9NS37 354 aa16.69■□□□□ 0.26
ACTN4-205ENST00000477174 PA2G4Q9UQ80 394 aaKnown RBP16.69■□□□□ 0.26
ACTN4-205ENST00000477174 SCN9AQ15858 1988 aa16.69■□□□□ 0.26
ACTN4-205ENST00000477174 FAM205AQ6ZU69 1335 aa16.69■□□□□ 0.26
ACTN4-205ENST00000477174 TMEM88BA6NKF7 163 aa16.68■□□□□ 0.26
ACTN4-205ENST00000477174 SLC5A1P13866 664 aa16.68■□□□□ 0.26
ACTN4-205ENST00000477174 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.68■□□□□ 0.26
ACTN4-205ENST00000477174 HDAC9Q9UKV0 1011 aa16.68■□□□□ 0.26
ACTN4-205ENST00000477174 ADAMTSL1Q8N6G6 1762 aa16.67■□□□□ 0.26
ACTN4-205ENST00000477174 PNMA6EA0A0J9YXQ4 647 aa16.67■□□□□ 0.26
ACTN4-205ENST00000477174 BCAMP50895 628 aa16.67■□□□□ 0.26
ACTN4-205ENST00000477174 POLA2Q14181 598 aa16.67■□□□□ 0.26
ACTN4-205ENST00000477174 PDE3AQ14432 1141 aa16.67■□□□□ 0.26
ACTN4-205ENST00000477174 DCPSQ96C86 337 aaKnown RBP16.67■□□□□ 0.26
ACTN4-205ENST00000477174 CHMP4BQ9H444 224 aaKnown RBP16.67■□□□□ 0.26
ACTN4-205ENST00000477174 HTRA3P83110 453 aa16.66■□□□□ 0.26
ACTN4-205ENST00000477174 G3BP1Q13283 466 aaKnown RBP eCLIP16.66■□□□□ 0.261e-12■□□□□ 8.8
ACTN4-205ENST00000477174 SCARF1Q14162 830 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms