RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 A0A0G2JLW4 131 aa13.68□□□□□ -0.22
NUP188-205ENST00000477069 CAMTA2O94983 1202 aa13.68□□□□□ -0.22
NUP188-205ENST00000477069 METTL24Q5JXM2 366 aa13.68□□□□□ -0.22
NUP188-205ENST00000477069 FAM43AQ8N2R8 423 aa13.68□□□□□ -0.22
NUP188-205ENST00000477069 GTF3C6Q969F1 213 aa13.68□□□□□ -0.22
NUP188-205ENST00000477069 ACSBG1Q96GR2 724 aa13.68□□□□□ -0.22
NUP188-205ENST00000477069 AGXT2Q9BYV1 514 aa13.68□□□□□ -0.22
NUP188-205ENST00000477069 ZFYP08048 801 aaPredicted RBP13.67□□□□□ -0.22
NUP188-205ENST00000477069 PDIA4P13667 645 aaKnown RBP13.67□□□□□ -0.22
NUP188-205ENST00000477069 ATP6V1AP38606 617 aa13.67□□□□□ -0.22
NUP188-205ENST00000477069 ZAP70P43403 619 aa13.67□□□□□ -0.22
NUP188-205ENST00000477069 FKBP4Q02790 459 aaKnown RBP eCLIP13.67□□□□□ -0.22
NUP188-205ENST00000477069 FOXD4L6Q3SYB3 417 aaPredicted RBP13.67□□□□□ -0.22
NUP188-205ENST00000477069 SUSD4Q5VX71 490 aa13.67□□□□□ -0.22
NUP188-205ENST00000477069 FOXD4L3Q6VB84 417 aaPredicted RBP13.67□□□□□ -0.22
NUP188-205ENST00000477069 Q6ZUG5 572 aa13.67□□□□□ -0.22
NUP188-205ENST00000477069 COL4A1P02462 1669 aa13.67□□□□□ -0.22
NUP188-205ENST00000477069 HMGB1P09429 215 aaKnown RBP13.67□□□□□ -0.22
NUP188-205ENST00000477069 MCAMP43121 646 aa13.67□□□□□ -0.22
NUP188-205ENST00000477069 EXOSC10Q01780 885 aaKnown RBP13.67□□□□□ -0.22
NUP188-205ENST00000477069 LRSAM1Q6UWE0 723 aa13.67□□□□□ -0.22
NUP188-205ENST00000477069 PDE8BO95263 885 aa13.67□□□□□ -0.22
NUP188-205ENST00000477069 ATP6V1DQ9Y5K8 247 aa13.67□□□□□ -0.22
NUP188-205ENST00000477069 FGFR2P21802 821 aa13.66□□□□□ -0.22
NUP188-205ENST00000477069 GORABQ5T7V8 394 aa13.66□□□□□ -0.22
NUP188-205ENST00000477069 PI16Q6UXB8 463 aa13.66□□□□□ -0.22
NUP188-205ENST00000477069 DHX32Q7L7V1 743 aaKnown RBP13.66□□□□□ -0.22
NUP188-205ENST00000477069 BCL9LQ86UU0 1499 aa13.66□□□□□ -0.22
NUP188-205ENST00000477069 RTL9Q8NET4 1388 aa13.66□□□□□ -0.22
NUP188-205ENST00000477069 LRRFIP1Q32MZ4 808 aaKnown RBP13.66□□□□□ -0.22
NUP188-205ENST00000477069 RBSNQ9H1K0 784 aa13.66□□□□□ -0.22
NUP188-205ENST00000477069 RTN4Q9NQC3 1192 aaKnown RBP13.66□□□□□ -0.22
NUP188-205ENST00000477069 CNNM1Q9NRU3 951 aa13.66□□□□□ -0.22
NUP188-205ENST00000477069 THSD7AQ9UPZ6 1657 aa13.65□□□□□ -0.22
NUP188-205ENST00000477069 NUTM2BA6NNL0 878 aaPredicted RBP13.65□□□□□ -0.22
NUP188-205ENST00000477069 NUTM2EB1AL46 878 aaPredicted RBP13.65□□□□□ -0.22
NUP188-205ENST00000477069 E7EWF7 191 aa13.65□□□□□ -0.22
NUP188-205ENST00000477069 NASPP49321 788 aaPredicted RBP13.65□□□□□ -0.22
NUP188-205ENST00000477069 CDC37L1Q7L3B6 337 aa13.65□□□□□ -0.22
NUP188-205ENST00000477069 NUTM2AQ8IVF1 878 aaPredicted RBP13.65□□□□□ -0.22
NUP188-205ENST00000477069 APPBP2Q92624 585 aa13.65□□□□□ -0.22
NUP188-205ENST00000477069 MROH5Q6ZUA9 1318 aa13.65□□□□□ -0.22
NUP188-205ENST00000477069 SYCE3A1L190 88 aa13.65□□□□□ -0.22
NUP188-205ENST00000477069 ARID4AP29374 1257 aaPredicted RBP13.65□□□□□ -0.22
NUP188-205ENST00000477069 FBXL16Q8N461 479 aa13.65□□□□□ -0.22
NUP188-205ENST00000477069 PPP1R9BQ96SB3 815 aa13.65□□□□□ -0.22
NUP188-205ENST00000477069 NTSR2O95665 410 aa13.64□□□□□ -0.23
NUP188-205ENST00000477069 LARP1BQ659C4 914 aaKnown RBP13.64□□□□□ -0.23
NUP188-205ENST00000477069 NHSQ6T4R5 1651 aa13.64□□□□□ -0.23
NUP188-205ENST00000477069 PFKFB2O60825 505 aa13.64□□□□□ -0.23
NUP188-205ENST00000477069 PDCP20941 246 aa13.64□□□□□ -0.23
NUP188-205ENST00000477069 UBE2HP62256 183 aa13.64□□□□□ -0.23
NUP188-205ENST00000477069 DNM1Q05193 864 aaKnown RBP13.64□□□□□ -0.23
NUP188-205ENST00000477069 SMARCC2Q8TAQ2 1214 aa13.64□□□□□ -0.23
NUP188-205ENST00000477069 PUS7LQ9H0K6 701 aaKnown RBP13.64□□□□□ -0.23
NUP188-205ENST00000477069 COL24A1Q17RW2 1714 aa13.64□□□□□ -0.23
NUP188-205ENST00000477069 VPS37CA5D8V6 355 aaPredicted RBP13.63□□□□□ -0.23
NUP188-205ENST00000477069 SCRN1Q12765 414 aa13.63□□□□□ -0.23
NUP188-205ENST00000477069 STK3Q13188 491 aa13.63□□□□□ -0.23
NUP188-205ENST00000477069 PARP10Q53GL7 1025 aa13.63□□□□□ -0.23
NUP188-205ENST00000477069 TTLL5Q6EMB2 1281 aa13.63□□□□□ -0.23
NUP188-205ENST00000477069 BRF1Q92994 677 aa13.63□□□□□ -0.23
NUP188-205ENST00000477069 UTP14AQ9BVJ6 771 aaKnown RBP13.63□□□□□ -0.23
NUP188-205ENST00000477069 BTAF1O14981 1849 aa13.63□□□□□ -0.23
NUP188-205ENST00000477069 KCNQ2O43526 872 aa13.63□□□□□ -0.23
NUP188-205ENST00000477069 PUM3Q15397 648 aaKnown RBP13.63□□□□□ -0.23
NUP188-205ENST00000477069 JAK2O60674 1132 aa13.63□□□□□ -0.23
NUP188-205ENST00000477069 ADD2P35612 726 aa13.63□□□□□ -0.23
NUP188-205ENST00000477069 SMARCC1Q92922 1105 aaPredicted RBP13.63□□□□□ -0.23
NUP188-205ENST00000477069 LRRC2Q9BYS8 371 aa13.63□□□□□ -0.23
NUP188-205ENST00000477069 C4AP0C0L4 1744 aa13.63□□□□□ -0.23
NUP188-205ENST00000477069 C4BP0C0L5 1744 aa13.63□□□□□ -0.23
NUP188-205ENST00000477069 TOM1O60784 492 aa13.62□□□□□ -0.23
NUP188-205ENST00000477069 HCLS1P14317 486 aaPredicted RBP13.62□□□□□ -0.23
NUP188-205ENST00000477069 CCDC102BQ68D86 513 aa13.62□□□□□ -0.23
NUP188-205ENST00000477069 LPIN2Q92539 896 aa13.62□□□□□ -0.23
NUP188-205ENST00000477069 SYAP1Q96A49 352 aaPredicted RBP13.62□□□□□ -0.23
NUP188-205ENST00000477069 PIH1D3Q9NQM4 214 aaKnown RBP13.62□□□□□ -0.23
NUP188-205ENST00000477069 PHKA1P46020 1223 aa13.62□□□□□ -0.23
NUP188-205ENST00000477069 EVCP57679 992 aa13.62□□□□□ -0.23
NUP188-205ENST00000477069 CCDC173Q0VFZ6 552 aa13.62□□□□□ -0.23
NUP188-205ENST00000477069 LLPHQ9BRT6 129 aaKnown RBP13.62□□□□□ -0.23
NUP188-205ENST00000477069 RRAGDQ9NQL2 400 aaPredicted RBP13.62□□□□□ -0.23
NUP188-205ENST00000477069 FIBPO43427 364 aa13.61□□□□□ -0.23
NUP188-205ENST00000477069 TTF1Q15361 905 aaPredicted RBP13.61□□□□□ -0.23
NUP188-205ENST00000477069 WASHC4Q2M389 1173 aa13.61□□□□□ -0.23
NUP188-205ENST00000477069 CTNNA3Q9UI47 895 aa13.61□□□□□ -0.23
NUP188-205ENST00000477069 CHD4Q14839 1912 aa13.61□□□□□ -0.23
NUP188-205ENST00000477069 SALL1Q9NSC2 1324 aa13.61□□□□□ -0.23
NUP188-205ENST00000477069 GPAA1O43292 621 aa13.61□□□□□ -0.23
NUP188-205ENST00000477069 CTDNEP1O95476 244 aa13.61□□□□□ -0.23
NUP188-205ENST00000477069 FGAP02671 866 aa13.61□□□□□ -0.23
NUP188-205ENST00000477069 PIP4K2BP78356 416 aa13.61□□□□□ -0.23
NUP188-205ENST00000477069 VPS72Q15906 364 aa13.61□□□□□ -0.23
NUP188-205ENST00000477069 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.61□□□□□ -0.231e-6■■■■□ 21.6
NUP188-205ENST00000477069 ELP1O95163 1332 aa13.61□□□□□ -0.23
NUP188-205ENST00000477069 LY75O60449 1722 aa13.61□□□□□ -0.23
NUP188-205ENST00000477069 TIAM2Q8IVF5 1701 aa13.61□□□□□ -0.23
NUP188-205ENST00000477069 TCRBV5S4A2TA0A5A2 114 aa13.6□□□□□ -0.23
NUP188-205ENST00000477069 UQCRFS1P1P0C7P4 283 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 1023.2 ms