RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 USP17L8P0C7I0 530 aa13.67□□□□□ -0.22
SEC13-214ENST00000476597 ECE1P42892 770 aa13.67□□□□□ -0.22
SEC13-214ENST00000476597 DACT2Q5SW24 774 aa13.67□□□□□ -0.22
SEC13-214ENST00000476597 STRIP1Q5VSL9 837 aa13.67□□□□□ -0.22
SEC13-214ENST00000476597 CYP4F22Q6NT55 531 aa13.67□□□□□ -0.22
SEC13-214ENST00000476597 KRT26Q7Z3Y9 468 aa13.67□□□□□ -0.22
SEC13-214ENST00000476597 SSH1Q8WYL5 1049 aa13.67□□□□□ -0.22
SEC13-214ENST00000476597 HHIPL1Q96JK4 782 aa13.67□□□□□ -0.22
SEC13-214ENST00000476597 TAF5LO75529 589 aa13.66□□□□□ -0.22
SEC13-214ENST00000476597 KLRK1P26718 216 aa13.66□□□□□ -0.22
SEC13-214ENST00000476597 MAP2K1Q02750 393 aaPredicted RBP13.66□□□□□ -0.22
SEC13-214ENST00000476597 SCARF1Q14162 830 aa13.66□□□□□ -0.22
SEC13-214ENST00000476597 CCDC57Q2TAC2 916 aa13.66□□□□□ -0.22
SEC13-214ENST00000476597 C15orf52Q6ZUT6 534 aaKnown RBP13.66□□□□□ -0.22
SEC13-214ENST00000476597 HELBQ8NG08 1087 aaPredicted RBP13.66□□□□□ -0.22
SEC13-214ENST00000476597 KAZALD1Q96I82 304 aa13.66□□□□□ -0.22
SEC13-214ENST00000476597 ZNF594Q96JF6 807 aaPredicted RBP13.66□□□□□ -0.22
SEC13-214ENST00000476597 ZNF408Q9H9D4 720 aa13.66□□□□□ -0.22
SEC13-214ENST00000476597 MYOZ2Q9NPC6 264 aa13.66□□□□□ -0.22
SEC13-214ENST00000476597 CHMP3Q9Y3E7 222 aa13.66□□□□□ -0.22
SEC13-214ENST00000476597 UTYO14607 1347 aa13.65□□□□□ -0.22
SEC13-214ENST00000476597 PTPRCP08575 1304 aa13.65□□□□□ -0.22
SEC13-214ENST00000476597 SNAP23O00161 211 aa13.65□□□□□ -0.22
SEC13-214ENST00000476597 NBPF7P0C2Y1 421 aaPredicted RBP13.65□□□□□ -0.22
SEC13-214ENST00000476597 KCNJ4P48050 445 aa13.65□□□□□ -0.22
SEC13-214ENST00000476597 ALDH1L2Q3SY69 923 aa13.65□□□□□ -0.22
SEC13-214ENST00000476597 TTLL5Q6EMB2 1281 aa13.65□□□□□ -0.22
SEC13-214ENST00000476597 LDHAL6AQ6ZMR3 332 aa13.65□□□□□ -0.22
SEC13-214ENST00000476597 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
SEC13-214ENST00000476597 AIDAQ96BJ3 306 aa13.65□□□□□ -0.22
SEC13-214ENST00000476597 SUCLG2Q96I99 432 aa13.65□□□□□ -0.22
SEC13-214ENST00000476597 MXD3Q9BW11 206 aa13.65□□□□□ -0.22
SEC13-214ENST00000476597 CD209Q9NNX6 404 aa13.65□□□□□ -0.22
SEC13-214ENST00000476597 ASTN2O75129 1339 aaPredicted RBP13.64□□□□□ -0.23
SEC13-214ENST00000476597 IRS2Q9Y4H2 1338 aa13.64□□□□□ -0.23
SEC13-214ENST00000476597 ADM5C9JUS6 153 aa13.64□□□□□ -0.23
SEC13-214ENST00000476597 MAP2K2P36507 400 aa13.64□□□□□ -0.23
SEC13-214ENST00000476597 CTCFP49711 727 aaPredicted RBP13.64□□□□□ -0.23
SEC13-214ENST00000476597 MMP14P50281 582 aa13.64□□□□□ -0.23
SEC13-214ENST00000476597 SULF1Q8IWU6 871 aa13.64□□□□□ -0.23
SEC13-214ENST00000476597 GGA3Q9NZ52 723 aa13.64□□□□□ -0.23
SEC13-214ENST00000476597 MYO3BQ8WXR4 1341 aa13.64□□□□□ -0.23
SEC13-214ENST00000476597 CACNA1FO60840 1977 aa13.63□□□□□ -0.23
SEC13-214ENST00000476597 GRM1Q13255 1194 aa13.63□□□□□ -0.23
SEC13-214ENST00000476597 TAF7LQ5H9L4 462 aa13.63□□□□□ -0.23
SEC13-214ENST00000476597 ANGEL2Q5VTE6 544 aaKnown RBP13.63□□□□□ -0.23
SEC13-214ENST00000476597 TNS4Q8IZW8 715 aa13.63□□□□□ -0.23
SEC13-214ENST00000476597 PRDM10Q9NQV6 1147 aa13.63□□□□□ -0.23
SEC13-214ENST00000476597 CNNM1Q9NRU3 951 aa13.63□□□□□ -0.23
SEC13-214ENST00000476597 SCN9AQ15858 1988 aa13.63□□□□□ -0.23
SEC13-214ENST00000476597 AOC2O75106 756 aa13.62□□□□□ -0.23
SEC13-214ENST00000476597 CT47B1P0C2W7 299 aaPredicted RBP13.62□□□□□ -0.23
SEC13-214ENST00000476597 HUNKP57058 714 aa13.62□□□□□ -0.23
SEC13-214ENST00000476597 GTF2IP78347 998 aa13.62□□□□□ -0.23
SEC13-214ENST00000476597 NBPF9Q3BBW0 867 aa13.62□□□□□ -0.23
SEC13-214ENST00000476597 RABL6Q3YEC7 729 aaPredicted RBP13.62□□□□□ -0.23
SEC13-214ENST00000476597 OGFOD1Q8N543 542 aa13.62□□□□□ -0.23
SEC13-214ENST00000476597 C2orf69Q8N8R5 385 aa13.62□□□□□ -0.23
SEC13-214ENST00000476597 FBXW7Q969H0 707 aa13.62□□□□□ -0.23
SEC13-214ENST00000476597 USP44Q9H0E7 712 aa13.62□□□□□ -0.23
SEC13-214ENST00000476597 GBA2Q9HCG7 927 aaPredicted RBP13.62□□□□□ -0.23
SEC13-214ENST00000476597 PITPNM2Q9BZ72 1349 aa13.62□□□□□ -0.23
SEC13-214ENST00000476597 PLIN1O60240 522 aa13.61□□□□□ -0.23
SEC13-214ENST00000476597 IL1R1P14778 569 aa13.61□□□□□ -0.23
SEC13-214ENST00000476597 ANKRD44Q8N8A2 993 aa13.61□□□□□ -0.23
SEC13-214ENST00000476597 CDCA5Q96FF9 252 aa13.61□□□□□ -0.23
SEC13-214ENST00000476597 PUS3Q9BZE2 481 aaKnown RBP13.61□□□□□ -0.23
SEC13-214ENST00000476597 BICC1Q9H694 974 aaKnown RBP13.61□□□□□ -0.23
SEC13-214ENST00000476597 RIPOR2Q9Y4F9 1068 aa13.61□□□□□ -0.23
SEC13-214ENST00000476597 WNT10BO00744 389 aa13.6□□□□□ -0.23
SEC13-214ENST00000476597 HSPA8P11142 646 aaKnown RBP13.6□□□□□ -0.23
SEC13-214ENST00000476597 LBX1P52954 281 aa13.6□□□□□ -0.23
SEC13-214ENST00000476597 UBE4AQ14139 1066 aa13.6□□□□□ -0.23
SEC13-214ENST00000476597 ZNF804AQ7Z570 1209 aa13.6□□□□□ -0.23
SEC13-214ENST00000476597 KIAA0825Q8IV33 1275 aa13.6□□□□□ -0.23
SEC13-214ENST00000476597 SMC4Q9NTJ3 1288 aa13.6□□□□□ -0.23
SEC13-214ENST00000476597 MYH3P11055 1940 aa13.59□□□□□ -0.23
SEC13-214ENST00000476597 BRPF1P55201 1214 aaPredicted RBP13.59□□□□□ -0.23
SEC13-214ENST00000476597 RGMBQ6NW40 437 aa13.59□□□□□ -0.23
SEC13-214ENST00000476597 CERS5Q8N5B7 392 aa13.59□□□□□ -0.23
SEC13-214ENST00000476597 ZBED3Q96IU2 234 aaPredicted RBP13.59□□□□□ -0.23
SEC13-214ENST00000476597 BEGAINQ9BUH8 593 aa13.59□□□□□ -0.23
SEC13-214ENST00000476597 HDAC9Q9UKV0 1011 aa13.59□□□□□ -0.23
SEC13-214ENST00000476597 SASH1O94885 1247 aa13.58□□□□□ -0.24
SEC13-214ENST00000476597 FKBP1AP62942 108 aaKnown RBP13.58□□□□□ -0.24
SEC13-214ENST00000476597 NOGQ13253 232 aa13.58□□□□□ -0.24
SEC13-214ENST00000476597 CCDC102AQ96A19 550 aa13.58□□□□□ -0.24
SEC13-214ENST00000476597 ZIC5Q96T25 663 aa13.58□□□□□ -0.24
SEC13-214ENST00000476597 NOB1Q9ULX3 412 aaKnown RBP13.58□□□□□ -0.24
SEC13-214ENST00000476597 MROH5Q6ZUA9 1318 aa13.58□□□□□ -0.24
SEC13-214ENST00000476597 FAM155AB1AL88 458 aaPredicted RBP13.57□□□□□ -0.24
SEC13-214ENST00000476597 FKBP1BP68106 108 aa13.57□□□□□ -0.24
SEC13-214ENST00000476597 LRRC24Q50LG9 513 aa13.57□□□□□ -0.24
SEC13-214ENST00000476597 TDRD7Q8NHU6 1098 aaKnown RBP13.57□□□□□ -0.24
SEC13-214ENST00000476597 FAM84BQ96KN1 310 aaPredicted RBP13.57□□□□□ -0.24
SEC13-214ENST00000476597 SCAF8Q9UPN6 1271 aaKnown RBP13.57□□□□□ -0.24
SEC13-214ENST00000476597 TRPM7Q96QT4 1865 aa13.57□□□□□ -0.24
SEC13-214ENST00000476597 CA12O43570 354 aa13.56□□□□□ -0.24
SEC13-214ENST00000476597 HIBADHP31937 336 aaKnown RBP13.56□□□□□ -0.24
SEC13-214ENST00000476597 ZNF157P51786 506 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms