RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ZBTB12Q9Y330 459 aaPredicted RBP12.81□□□□□ -0.36
CCM2-208ENST00000476594 MROH5Q6ZUA9 1318 aa12.81□□□□□ -0.36
CCM2-208ENST00000476594 HTRA3P83110 453 aa12.8□□□□□ -0.36
CCM2-208ENST00000476594 KIF4BQ2VIQ3 1234 aa12.8□□□□□ -0.36
CCM2-208ENST00000476594 RABL6Q3YEC7 729 aaPredicted RBP12.8□□□□□ -0.36
CCM2-208ENST00000476594 STRIP1Q5VSL9 837 aa12.8□□□□□ -0.36
CCM2-208ENST00000476594 DCPSQ96C86 337 aaKnown RBP12.8□□□□□ -0.36
CCM2-208ENST00000476594 BICC1Q9H694 974 aaKnown RBP12.8□□□□□ -0.36
CCM2-208ENST00000476594 HDAC9Q9UKV0 1011 aa12.8□□□□□ -0.36
CCM2-208ENST00000476594 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
CCM2-208ENST00000476594 UBE4AQ14139 1066 aa12.79□□□□□ -0.36
CCM2-208ENST00000476594 TBC1D10BQ4KMP7 808 aaPredicted RBP12.79□□□□□ -0.36
CCM2-208ENST00000476594 EPHA10Q5JZY3 1008 aa12.79□□□□□ -0.36
CCM2-208ENST00000476594 C15orf52Q6ZUT6 534 aaKnown RBP12.79□□□□□ -0.36
CCM2-208ENST00000476594 JMYQ8N9B5 988 aa12.79□□□□□ -0.36
CCM2-208ENST00000476594 PGAP2Q9UHJ9 254 aa12.79□□□□□ -0.36
CCM2-208ENST00000476594 ABT1Q9ULW3 272 aaKnown RBP12.79□□□□□ -0.36
CCM2-208ENST00000476594 ZBED9Q6R2W3 1325 aa12.79□□□□□ -0.36
CCM2-208ENST00000476594 PLIN1O60240 522 aa12.78□□□□□ -0.36
CCM2-208ENST00000476594 RBM26Q5T8P6 1007 aaKnown RBP12.78□□□□□ -0.36
CCM2-208ENST00000476594 TTLL5Q6EMB2 1281 aa12.78□□□□□ -0.36
CCM2-208ENST00000476594 SAMD7Q7Z3H4 446 aa12.78□□□□□ -0.36
CCM2-208ENST00000476594 SULF1Q8IWU6 871 aa12.78□□□□□ -0.36
CCM2-208ENST00000476594 TRPM4Q8TD43 1214 aa12.78□□□□□ -0.36
CCM2-208ENST00000476594 USP44Q9H0E7 712 aa12.78□□□□□ -0.36
CCM2-208ENST00000476594 PSME4Q14997 1843 aa12.78□□□□□ -0.36
CCM2-208ENST00000476594 CNTNAP1P78357 1384 aa12.78□□□□□ -0.36
CCM2-208ENST00000476594 TAF5LO75529 589 aa12.77□□□□□ -0.37
CCM2-208ENST00000476594 GNAI3P08754 354 aa12.77□□□□□ -0.37
CCM2-208ENST00000476594 ECE1P42892 770 aa12.77□□□□□ -0.37
CCM2-208ENST00000476594 ZNF280AP59817 542 aaPredicted RBP12.77□□□□□ -0.37
CCM2-208ENST00000476594 DEFB115Q30KQ5 88 aa12.77□□□□□ -0.37
CCM2-208ENST00000476594 METTL24Q5JXM2 366 aa12.77□□□□□ -0.37
CCM2-208ENST00000476594 VPS37DQ86XT2 251 aa12.77□□□□□ -0.37
CCM2-208ENST00000476594 HELBQ8NG08 1087 aaPredicted RBP12.77□□□□□ -0.37
CCM2-208ENST00000476594 ZNF594Q96JF6 807 aaPredicted RBP12.77□□□□□ -0.37
CCM2-208ENST00000476594 CD209Q9NNX6 404 aa12.77□□□□□ -0.37
CCM2-208ENST00000476594 KCNQ5Q9NR82 932 aa12.77□□□□□ -0.37
CCM2-208ENST00000476594 MKRN1Q9UHC7 482 aaKnown RBP12.77□□□□□ -0.37
CCM2-208ENST00000476594 CELF2O95319 508 aaKnown RBP12.76□□□□□ -0.37
CCM2-208ENST00000476594 CAVIN4Q5BKX8 364 aa12.76□□□□□ -0.37
CCM2-208ENST00000476594 PAXIP1Q6ZW49 1069 aaPredicted RBP12.76□□□□□ -0.37
CCM2-208ENST00000476594 KRT26Q7Z3Y9 468 aa12.76□□□□□ -0.37
CCM2-208ENST00000476594 FRAT1Q92837 279 aaPredicted RBP12.76□□□□□ -0.37
CCM2-208ENST00000476594 GLIS2Q9BZE0 524 aaPredicted RBP12.76□□□□□ -0.37
CCM2-208ENST00000476594 MYOZ2Q9NPC6 264 aa12.76□□□□□ -0.37
CCM2-208ENST00000476594 FBXO3Q9UK99 471 aa12.76□□□□□ -0.37
CCM2-208ENST00000476594 SCN9AQ15858 1988 aa12.76□□□□□ -0.37
CCM2-208ENST00000476594 RASSF10A6NK89 507 aa12.75□□□□□ -0.37
CCM2-208ENST00000476594 HIRAP54198 1017 aaPredicted RBP12.75□□□□□ -0.37
CCM2-208ENST00000476594 GTF2IP78347 998 aa12.75□□□□□ -0.37
CCM2-208ENST00000476594 DACT2Q5SW24 774 aa12.75□□□□□ -0.37
CCM2-208ENST00000476594 ZKSCAN2Q63HK3 967 aa12.75□□□□□ -0.37
CCM2-208ENST00000476594 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
CCM2-208ENST00000476594 ATF7IPQ6VMQ6 1270 aa12.75□□□□□ -0.37
CCM2-208ENST00000476594 TXNRD3Q86VQ6 643 aa12.75□□□□□ -0.37
CCM2-208ENST00000476594 ANKRD44Q8N8A2 993 aa12.75□□□□□ -0.37
CCM2-208ENST00000476594 KAZALD1Q96I82 304 aa12.75□□□□□ -0.37
CCM2-208ENST00000476594 TRPM7Q96QT4 1865 aa12.75□□□□□ -0.37
CCM2-208ENST00000476594 PITPNM2Q9BZ72 1349 aa12.75□□□□□ -0.37
CCM2-208ENST00000476594 ZNF408Q9H9D4 720 aa12.75□□□□□ -0.37
CCM2-208ENST00000476594 GGA3Q9NZ52 723 aa12.75□□□□□ -0.37
CCM2-208ENST00000476594 SHTN1A0MZ66 631 aa12.74□□□□□ -0.37
CCM2-208ENST00000476594 FRAT2O75474 233 aaPredicted RBP12.74□□□□□ -0.37
CCM2-208ENST00000476594 IFIT1P09914 478 aaKnown RBP12.74□□□□□ -0.37
CCM2-208ENST00000476594 IL1R1P14778 569 aa12.74□□□□□ -0.37
CCM2-208ENST00000476594 HIBADHP31937 336 aaKnown RBP12.74□□□□□ -0.37
CCM2-208ENST00000476594 FKBP1AP62942 108 aaKnown RBP12.74□□□□□ -0.37
CCM2-208ENST00000476594 FTSJ3Q8IY81 847 aaKnown RBP12.74□□□□□ -0.37
CCM2-208ENST00000476594 AIDAQ96BJ3 306 aa12.74□□□□□ -0.37
CCM2-208ENST00000476594 GMLQ99445 158 aa12.74□□□□□ -0.37
CCM2-208ENST00000476594 RNF39Q9H2S5 420 aa12.74□□□□□ -0.37
CCM2-208ENST00000476594 EYA2O00167 538 aa12.73□□□□□ -0.37
CCM2-208ENST00000476594 TRAF5O00463 557 aa12.73□□□□□ -0.37
CCM2-208ENST00000476594 MYO1BO43795 1136 aa12.73□□□□□ -0.37
CCM2-208ENST00000476594 PDE8BO95263 885 aa12.73□□□□□ -0.37
CCM2-208ENST00000476594 KLRK1P26718 216 aa12.73□□□□□ -0.37
CCM2-208ENST00000476594 SCARF1Q14162 830 aa12.73□□□□□ -0.37
CCM2-208ENST00000476594 PUM3Q15397 648 aaKnown RBP12.73□□□□□ -0.37
CCM2-208ENST00000476594 USP48Q86UV5 1035 aa12.73□□□□□ -0.37
CCM2-208ENST00000476594 C2orf69Q8N8R5 385 aa12.73□□□□□ -0.37
CCM2-208ENST00000476594 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
CCM2-208ENST00000476594 RIPOR2Q9Y4F9 1068 aa12.73□□□□□ -0.37
CCM2-208ENST00000476594 TLL2Q9Y6L7 1015 aa12.73□□□□□ -0.37
CCM2-208ENST00000476594 A0A1B0GUL6 1792 aa12.73□□□□□ -0.37
CCM2-208ENST00000476594 WTIPA6NIX2 430 aaPredicted RBP12.72□□□□□ -0.37
CCM2-208ENST00000476594 SASH1O94885 1247 aa12.72□□□□□ -0.37
CCM2-208ENST00000476594 SLC5A1P13866 664 aa12.72□□□□□ -0.37
CCM2-208ENST00000476594 NF2P35240 595 aa12.72□□□□□ -0.37
CCM2-208ENST00000476594 ANGEL2Q5VTE6 544 aaKnown RBP12.72□□□□□ -0.37
CCM2-208ENST00000476594 KIAA0825Q8IV33 1275 aa12.72□□□□□ -0.37
CCM2-208ENST00000476594 PUS3Q9BZE2 481 aaKnown RBP12.72□□□□□ -0.37
CCM2-208ENST00000476594 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
CCM2-208ENST00000476594 IRS2Q9Y4H2 1338 aa12.71□□□□□ -0.37
CCM2-208ENST00000476594 SNAP23O00161 211 aa12.71□□□□□ -0.37
CCM2-208ENST00000476594 BCAR3O75815 825 aa12.71□□□□□ -0.37
CCM2-208ENST00000476594 CIAO1O76071 339 aa12.71□□□□□ -0.37
CCM2-208ENST00000476594 EGFRP00533 1210 aa12.71□□□□□ -0.37
CCM2-208ENST00000476594 MS4A1P11836 297 aa12.71□□□□□ -0.37
CCM2-208ENST00000476594 TRIM27P14373 513 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms