RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 CWC25Q9NXE8 425 aaPredicted RBP21.32■■□□□ 1
APOBEC3F-203ENST00000476513 OGFOD1Q8N543 542 aa21.31■■□□□ 1
APOBEC3F-203ENST00000476513 MBIPQ9NS73 344 aa21.31■■□□□ 1
APOBEC3F-203ENST00000476513 MED23Q9ULK4 1368 aa21.31■■□□□ 1
APOBEC3F-203ENST00000476513 PRKG1Q13976 671 aa21.3■■□□□ 1
APOBEC3F-203ENST00000476513 ARMC9Q7Z3E5 817 aa21.3■■□□□ 1
APOBEC3F-203ENST00000476513 GCC1Q96CN9 775 aa21.3■■□□□ 1
APOBEC3F-203ENST00000476513 SASH1O94885 1247 aa21.29■■□□□ 1
APOBEC3F-203ENST00000476513 STRIP1Q5VSL9 837 aa21.29■■□□□ 1
APOBEC3F-203ENST00000476513 FBXW7Q969H0 707 aa21.29■■□□□ 1
APOBEC3F-203ENST00000476513 CDC5LQ99459 802 aaKnown RBP21.29■■□□□ 1
APOBEC3F-203ENST00000476513 MINPP1Q9UNW1 487 aa21.29■■□□□ 1
APOBEC3F-203ENST00000476513 MYO3BQ8WXR4 1341 aa21.29■■□□□ 1
APOBEC3F-203ENST00000476513 LDLRAD1Q5T700 205 aa21.28■■□□□ 1
APOBEC3F-203ENST00000476513 SPRYD7Q5W111 196 aa21.28■■□□□ 1
APOBEC3F-203ENST00000476513 METTL22Q9BUU2 404 aaPredicted RBP21.28■■□□□ 1
APOBEC3F-203ENST00000476513 BSDC1Q9NW68 430 aaPredicted RBP21.28■■□□□ 1
APOBEC3F-203ENST00000476513 ELL2O00472 640 aaPredicted RBP21.27■■□□□ 1
APOBEC3F-203ENST00000476513 ZNF853P0CG23 659 aa21.27■■□□□ 1
APOBEC3F-203ENST00000476513 CTSWP56202 376 aa21.27■■□□□ 1
APOBEC3F-203ENST00000476513 COA1Q9GZY4 146 aa21.27■■□□□ 1
APOBEC3F-203ENST00000476513 CCT4P50991 539 aaKnown RBP21.26■□□□□ 0.99
APOBEC3F-203ENST00000476513 TXNRD3Q86VQ6 643 aa21.26■□□□□ 0.99
APOBEC3F-203ENST00000476513 ALDH1A1P00352 501 aa21.25■□□□□ 0.99
APOBEC3F-203ENST00000476513 MMP14P50281 582 aa21.25■□□□□ 0.99
APOBEC3F-203ENST00000476513 HABP4Q5JVS0 413 aaKnown RBP21.25■□□□□ 0.99
APOBEC3F-203ENST00000476513 APOBEC3FQ8IUX4 373 aaKnown RBP21.25■□□□□ 0.99
APOBEC3F-203ENST00000476513 TTLL11Q8NHH1 800 aa21.25■□□□□ 0.99
APOBEC3F-203ENST00000476513 GREM2Q9H772 168 aa21.25■□□□□ 0.99
APOBEC3F-203ENST00000476513 ANGEL1Q9UNK9 670 aaKnown RBP21.25■□□□□ 0.99
APOBEC3F-203ENST00000476513 WDR43Q15061 677 aaKnown RBP eCLIP21.24■□□□□ 0.99
APOBEC3F-203ENST00000476513 ZBED3Q96IU2 234 aaPredicted RBP21.24■□□□□ 0.99
APOBEC3F-203ENST00000476513 FZD1Q9UP38 647 aa21.24■□□□□ 0.99
APOBEC3F-203ENST00000476513 ADAMTS8Q9UP79 889 aa21.24■□□□□ 0.99
APOBEC3F-203ENST00000476513 TRIM17Q9Y577 477 aa21.24■□□□□ 0.99
APOBEC3F-203ENST00000476513 ZNF646O15015 1829 aaPredicted RBP21.23■□□□□ 0.99
APOBEC3F-203ENST00000476513 POTEFA5A3E0 1075 aa21.23■□□□□ 0.99
APOBEC3F-203ENST00000476513 TTLL5Q6EMB2 1281 aa21.23■□□□□ 0.99
APOBEC3F-203ENST00000476513 OTOP1Q7RTM1 612 aa21.23■□□□□ 0.99
APOBEC3F-203ENST00000476513 KIAA0825Q8IV33 1275 aa21.23■□□□□ 0.99
APOBEC3F-203ENST00000476513 MYBBP1AQ9BQG0 1328 aaKnown RBP21.23■□□□□ 0.99
APOBEC3F-203ENST00000476513 MANSC4A6NHS7 340 aaPredicted RBP21.22■□□□□ 0.99
APOBEC3F-203ENST00000476513 DDX58O95786 925 aaKnown RBP21.22■□□□□ 0.99
APOBEC3F-203ENST00000476513 INHBEP58166 350 aa21.22■□□□□ 0.99
APOBEC3F-203ENST00000476513 IFNL1Q8IU54 200 aa21.22■□□□□ 0.99
APOBEC3F-203ENST00000476513 MAP3K2Q9Y2U5 619 aa21.22■□□□□ 0.99
APOBEC3F-203ENST00000476513 LEMD3Q9Y2U8 911 aa21.22■□□□□ 0.99
APOBEC3F-203ENST00000476513 IGKV5-2P06315 115 aa21.21■□□□□ 0.99
APOBEC3F-203ENST00000476513 KLRK1P26718 216 aa21.21■□□□□ 0.99
APOBEC3F-203ENST00000476513 INTS3Q68E01 1043 aaKnown RBP21.21■□□□□ 0.99
APOBEC3F-203ENST00000476513 SLC10A4Q96EP9 437 aa21.21■□□□□ 0.99
APOBEC3F-203ENST00000476513 IFT57Q9NWB7 429 aa21.21■□□□□ 0.99
APOBEC3F-203ENST00000476513 IGF2BP3O00425 579 aaKnown RBP eCLIP21.2■□□□□ 0.98
APOBEC3F-203ENST00000476513 C8orf58Q8NAV2 365 aa21.2■□□□□ 0.98
APOBEC3F-203ENST00000476513 CLMNQ96JQ2 1002 aa21.2■□□□□ 0.98
APOBEC3F-203ENST00000476513 DEFB129Q9H1M3 183 aa21.2■□□□□ 0.98
APOBEC3F-203ENST00000476513 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.2■□□□□ 0.98
APOBEC3F-203ENST00000476513 ZBTB48P10074 688 aaPredicted RBP21.19■□□□□ 0.98
APOBEC3F-203ENST00000476513 GNAI1P63096 354 aa21.19■□□□□ 0.98
APOBEC3F-203ENST00000476513 GTF2IP78347 998 aa21.19■□□□□ 0.98
APOBEC3F-203ENST00000476513 MAP3K11Q16584 847 aa21.19■□□□□ 0.98
APOBEC3F-203ENST00000476513 ZNF804BA4D1E1 1349 aa21.19■□□□□ 0.98
APOBEC3F-203ENST00000476513 PI4KAP2A4QPH2 592 aa21.18■□□□□ 0.98
APOBEC3F-203ENST00000476513 CCDC30Q5VVM6 783 aa21.18■□□□□ 0.98
APOBEC3F-203ENST00000476513 KSR2Q6VAB6 950 aa21.18■□□□□ 0.98
APOBEC3F-203ENST00000476513 PI4KAP1Q8N8J0 262 aa21.18■□□□□ 0.98
APOBEC3F-203ENST00000476513 WNK4Q96J92 1243 aa21.18■□□□□ 0.98
APOBEC3F-203ENST00000476513 COL1A1P02452 1464 aaPredicted RBP21.18■□□□□ 0.98
APOBEC3F-203ENST00000476513 IGHMBP2P38935 993 aaKnown RBP21.17■□□□□ 0.98
APOBEC3F-203ENST00000476513 DLGAP5Q15398 846 aa21.17■□□□□ 0.98
APOBEC3F-203ENST00000476513 PTPN22Q9Y2R2 807 aa21.17■□□□□ 0.98
APOBEC3F-203ENST00000476513 SSC5DA1L4H1 1573 aa21.17■□□□□ 0.98
APOBEC3F-203ENST00000476513 CWF19L2Q2TBE0 894 aaKnown RBP21.16■□□□□ 0.98
APOBEC3F-203ENST00000476513 ERO1AQ96HE7 468 aa21.16■□□□□ 0.98
APOBEC3F-203ENST00000476513 ANKRD2Q9GZV1 360 aa21.16■□□□□ 0.98
APOBEC3F-203ENST00000476513 SPEF2Q9C093 1822 aa21.15■□□□□ 0.98
APOBEC3F-203ENST00000476513 PPP1R12BO60237 982 aaPredicted RBP21.15■□□□□ 0.98
APOBEC3F-203ENST00000476513 CALD1Q05682 793 aaKnown RBP21.15■□□□□ 0.98
APOBEC3F-203ENST00000476513 CERS5Q8N5B7 392 aa21.15■□□□□ 0.98
APOBEC3F-203ENST00000476513 CD99L2Q8TCZ2 262 aa21.15■□□□□ 0.98
APOBEC3F-203ENST00000476513 PPP2R3BQ9Y5P8 575 aa21.15■□□□□ 0.98
APOBEC3F-203ENST00000476513 NEURL1BA8MQ27 555 aa21.14■□□□□ 0.97
APOBEC3F-203ENST00000476513 H7C1W4 665 aa21.14■□□□□ 0.97
APOBEC3F-203ENST00000476513 EN2P19622 333 aaPredicted RBP21.14■□□□□ 0.97
APOBEC3F-203ENST00000476513 ITGA6P23229 1130 aa21.14■□□□□ 0.97
APOBEC3F-203ENST00000476513 NEXNQ0ZGT2 675 aa21.14■□□□□ 0.97
APOBEC3F-203ENST00000476513 CRHR2Q13324 411 aa21.14■□□□□ 0.97
APOBEC3F-203ENST00000476513 UBE3BQ7Z3V4 1068 aa21.14■□□□□ 0.97
APOBEC3F-203ENST00000476513 MTMR14Q8NCE2 650 aa21.14■□□□□ 0.97
APOBEC3F-203ENST00000476513 ARMC5Q96C12 935 aa21.14■□□□□ 0.97
APOBEC3F-203ENST00000476513 CHMP4AQ9BY43 222 aa21.14■□□□□ 0.97
APOBEC3F-203ENST00000476513 CD209Q9NNX6 404 aa21.14■□□□□ 0.97
APOBEC3F-203ENST00000476513 PCDHAC2Q9Y5I4 1007 aa21.14■□□□□ 0.97
APOBEC3F-203ENST00000476513 KIAA0100Q14667 2235 aaKnown RBP21.14■□□□□ 0.97
APOBEC3F-203ENST00000476513 UNCXA6NJT0 531 aa21.13■□□□□ 0.97
APOBEC3F-203ENST00000476513 APAF1O14727 1248 aa21.13■□□□□ 0.97
APOBEC3F-203ENST00000476513 GJA5P36382 358 aa21.13■□□□□ 0.97
APOBEC3F-203ENST00000476513 TSPYL6Q8N831 410 aa21.13■□□□□ 0.97
APOBEC3F-203ENST00000476513 KCNJ4P48050 445 aa21.12■□□□□ 0.97
APOBEC3F-203ENST00000476513 CAP1Q01518 475 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms