RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TRIM33Q9UPN9 1127 aa8.75□□□□□ -1.01
PTCD3-211ENST00000476215 FURINP09958 794 aa8.74□□□□□ -1.01
PTCD3-211ENST00000476215 ATP11AP98196 1134 aa8.74□□□□□ -1.01
PTCD3-211ENST00000476215 RSPO4Q2I0M5 234 aaPredicted RBP8.74□□□□□ -1.01
PTCD3-211ENST00000476215 C1orf127Q8N9H9 656 aa8.74□□□□□ -1.01
PTCD3-211ENST00000476215 SPACA7Q96KW9 195 aa8.74□□□□□ -1.01
PTCD3-211ENST00000476215 PBX4Q9BYU1 374 aa8.74□□□□□ -1.01
PTCD3-211ENST00000476215 ADAM19Q9H013 955 aa8.74□□□□□ -1.01
PTCD3-211ENST00000476215 NFKBIEO00221 500 aa8.73□□□□□ -1.01
PTCD3-211ENST00000476215 SMNDC1O75940 238 aaKnown RBP eCLIP8.73□□□□□ -1.01
PTCD3-211ENST00000476215 MFAP1P55081 439 aaKnown RBP8.73□□□□□ -1.01
PTCD3-211ENST00000476215 DOC2BQ14184 412 aa8.73□□□□□ -1.01
PTCD3-211ENST00000476215 SETDB1Q15047 1291 aa8.73□□□□□ -1.01
PTCD3-211ENST00000476215 IL22RA1Q8N6P7 574 aa8.73□□□□□ -1.01
PTCD3-211ENST00000476215 TTC16Q8NEE8 873 aa8.73□□□□□ -1.01
PTCD3-211ENST00000476215 TMC1Q8TDI8 760 aa8.73□□□□□ -1.01
PTCD3-211ENST00000476215 DCAF11Q8TEB1 546 aa8.73□□□□□ -1.01
PTCD3-211ENST00000476215 PMEPA1Q969W9 287 aa8.73□□□□□ -1.01
PTCD3-211ENST00000476215 RASSF4Q9H2L5 321 aa8.73□□□□□ -1.01
PTCD3-211ENST00000476215 TNFRSF21O75509 655 aa8.72□□□□□ -1.01
PTCD3-211ENST00000476215 ITGB7P26010 798 aa8.72□□□□□ -1.01
PTCD3-211ENST00000476215 C8orf34Q49A92 452 aa8.72□□□□□ -1.01
PTCD3-211ENST00000476215 GDF6Q6KF10 455 aaPredicted RBP8.72□□□□□ -1.01
PTCD3-211ENST00000476215 ADAMTSL4Q6UY14 1074 aa8.72□□□□□ -1.01
PTCD3-211ENST00000476215 CCDC9Q9Y3X0 531 aaKnown RBP8.72□□□□□ -1.01
PTCD3-211ENST00000476215 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.72□□□□□ -1.01
PTCD3-211ENST00000476215 A6NHS1 94 aa8.71□□□□□ -1.02
PTCD3-211ENST00000476215 TMEM130Q8N3G9 435 aa8.71□□□□□ -1.02
PTCD3-211ENST00000476215 SNX29Q8TEQ0 813 aa8.71□□□□□ -1.02
PTCD3-211ENST00000476215 KANSL3Q9P2N6 904 aa8.71□□□□□ -1.02
PTCD3-211ENST00000476215 PPME1Q9Y570 386 aa8.71□□□□□ -1.02
PTCD3-211ENST00000476215 CES1P23141 567 aa8.7□□□□□ -1.02
PTCD3-211ENST00000476215 CEP135Q66GS9 1140 aa8.7□□□□□ -1.02
PTCD3-211ENST00000476215 Q6ZS46 218 aa8.7□□□□□ -1.02
PTCD3-211ENST00000476215 NCAPG2Q86XI2 1143 aa8.7□□□□□ -1.02
PTCD3-211ENST00000476215 CITED4Q96RK1 184 aa8.7□□□□□ -1.02
PTCD3-211ENST00000476215 RBCK1Q9BYM8 510 aa8.7□□□□□ -1.02
PTCD3-211ENST00000476215 DZANK1Q9NVP4 752 aa8.7□□□□□ -1.02
PTCD3-211ENST00000476215 H2AFB1P0C5Y9 115 aa8.69□□□□□ -1.02
PTCD3-211ENST00000476215 H2AFB2P0C5Z0 115 aa8.69□□□□□ -1.02
PTCD3-211ENST00000476215 CDC27P30260 824 aa8.69□□□□□ -1.02
PTCD3-211ENST00000476215 ZSCAN29Q8IWY8 852 aaPredicted RBP8.69□□□□□ -1.02
PTCD3-211ENST00000476215 POP1Q99575 1024 aaKnown RBP8.69□□□□□ -1.02
PTCD3-211ENST00000476215 PTPRAP18433 802 aa8.68□□□□□ -1.02
PTCD3-211ENST00000476215 PDE3BQ13370 1112 aa8.68□□□□□ -1.02
PTCD3-211ENST00000476215 TMC7Q7Z402 723 aa8.68□□□□□ -1.02
PTCD3-211ENST00000476215 TMEM102Q8N9M5 508 aaPredicted RBP8.68□□□□□ -1.02
PTCD3-211ENST00000476215 WFDC12Q8WWY7 111 aa8.68□□□□□ -1.02
PTCD3-211ENST00000476215 ASB16Q96NS5 453 aa8.68□□□□□ -1.02
PTCD3-211ENST00000476215 MRPL18Q9H0U6 180 aaKnown RBP8.68□□□□□ -1.02
PTCD3-211ENST00000476215 DYRK3O43781 588 aa8.67□□□□□ -1.02
PTCD3-211ENST00000476215 NOS3P29474 1203 aa8.67□□□□□ -1.02
PTCD3-211ENST00000476215 GALNT11Q8NCW6 608 aa8.67□□□□□ -1.02
PTCD3-211ENST00000476215 WNT8BQ93098 351 aa8.67□□□□□ -1.02
PTCD3-211ENST00000476215 USP21Q9UK80 565 aa8.67□□□□□ -1.02
PTCD3-211ENST00000476215 EREGO14944 169 aa8.66□□□□□ -1.02
PTCD3-211ENST00000476215 PHACTR2O75167 634 aa8.66□□□□□ -1.02
PTCD3-211ENST00000476215 ACPPP15309 386 aa8.66□□□□□ -1.02
PTCD3-211ENST00000476215 DNAJC14Q6Y2X3 702 aaPredicted RBP8.66□□□□□ -1.02
PTCD3-211ENST00000476215 FAM129BQ96TA1 746 aa8.66□□□□□ -1.02
PTCD3-211ENST00000476215 FOXD3Q9UJU5 478 aaPredicted RBP8.66□□□□□ -1.02
PTCD3-211ENST00000476215 SOX13Q9UN79 622 aa8.66□□□□□ -1.02
PTCD3-211ENST00000476215 ANKRD33BA6NCL7 494 aa8.65□□□□□ -1.02
PTCD3-211ENST00000476215 F8W735 103 aaPredicted RBP8.65□□□□□ -1.02
PTCD3-211ENST00000476215 IGHA2P01877 340 aa8.65□□□□□ -1.02
PTCD3-211ENST00000476215 EDN3P14138 238 aa8.65□□□□□ -1.02
PTCD3-211ENST00000476215 EPHA1P21709 976 aa8.65□□□□□ -1.02
PTCD3-211ENST00000476215 DZIP1LQ8IYY4 767 aaKnown RBP8.65□□□□□ -1.02
PTCD3-211ENST00000476215 KLHL23Q8NBE8 558 aa8.65□□□□□ -1.02
PTCD3-211ENST00000476215 DMRTB1Q96MA1 342 aa8.65□□□□□ -1.02
PTCD3-211ENST00000476215 BHLHE41Q9C0J9 482 aaPredicted RBP8.65□□□□□ -1.02
PTCD3-211ENST00000476215 LACRTQ9GZZ8 138 aa8.65□□□□□ -1.02
PTCD3-211ENST00000476215 ZFYVE28Q9HCC9 887 aa8.65□□□□□ -1.02
PTCD3-211ENST00000476215 LINC01387J3KSC0 135 aa8.64□□□□□ -1.03
PTCD3-211ENST00000476215 PDE2AO00408 941 aaPredicted RBP8.64□□□□□ -1.03
PTCD3-211ENST00000476215 GPR182O15218 404 aa8.64□□□□□ -1.03
PTCD3-211ENST00000476215 FOXD4L6Q3SYB3 417 aaPredicted RBP8.64□□□□□ -1.03
PTCD3-211ENST00000476215 PEAR1Q5VY43 1037 aaPredicted RBP8.64□□□□□ -1.03
PTCD3-211ENST00000476215 FOXD4L3Q6VB84 417 aaPredicted RBP8.64□□□□□ -1.03
PTCD3-211ENST00000476215 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.64□□□□□ -1.03
PTCD3-211ENST00000476215 NXPE3Q969Y0 559 aa8.64□□□□□ -1.03
PTCD3-211ENST00000476215 MEGF10Q96KG7 1140 aa8.64□□□□□ -1.03
PTCD3-211ENST00000476215 SEMA6BQ9H3T3 888 aa8.64□□□□□ -1.03
PTCD3-211ENST00000476215 AKTIPQ9H8T0 292 aa8.64□□□□□ -1.03
PTCD3-211ENST00000476215 AMOTL2Q9Y2J4 779 aa8.64□□□□□ -1.03
PTCD3-211ENST00000476215 H3BRJ5 948 aa8.63□□□□□ -1.03
PTCD3-211ENST00000476215 FSCN2O14926 492 aa8.63□□□□□ -1.03
PTCD3-211ENST00000476215 IREB2P48200 963 aaKnown RBP8.63□□□□□ -1.03
PTCD3-211ENST00000476215 HHIPQ96QV1 700 aa8.63□□□□□ -1.03
PTCD3-211ENST00000476215 ZKSCAN3Q9BRR0 538 aa8.63□□□□□ -1.03
PTCD3-211ENST00000476215 NIF3L1Q9GZT8 377 aa8.63□□□□□ -1.03
PTCD3-211ENST00000476215 OSGEPQ9NPF4 335 aa8.63□□□□□ -1.03
PTCD3-211ENST00000476215 SH2B1Q9NRF2 756 aaPredicted RBP8.63□□□□□ -1.03
PTCD3-211ENST00000476215 ERCC3P19447 782 aa8.62□□□□□ -1.03
PTCD3-211ENST00000476215 CD68P34810 354 aaPredicted RBP8.62□□□□□ -1.03
PTCD3-211ENST00000476215 PIP4K2BP78356 416 aa8.62□□□□□ -1.03
PTCD3-211ENST00000476215 GALNT12Q8IXK2 581 aa8.62□□□□□ -1.03
PTCD3-211ENST00000476215 OSMRQ99650 979 aa8.62□□□□□ -1.03
PTCD3-211ENST00000476215 TREHO43280 583 aa8.61□□□□□ -1.03
PTCD3-211ENST00000476215 PLCB3Q01970 1234 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms