RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ZSWIM6Q9HCJ5 1215 aa8.24□□□□□ -1.09
UBR4-212ENST00000475973 SPTLC3Q9NUV7 552 aa8.24□□□□□ -1.09
UBR4-212ENST00000475973 CCDC87Q9NVE4 849 aa8.24□□□□□ -1.09
UBR4-212ENST00000475973 LRRFIP2Q9Y608 721 aaKnown RBP8.24□□□□□ -1.09
UBR4-212ENST00000475973 AK9Q5TCS8 1911 aa8.24□□□□□ -1.09
UBR4-212ENST00000475973 COL15A1P39059 1388 aa8.23□□□□□ -1.09
UBR4-212ENST00000475973 DYNC1I1O14576 645 aa8.23□□□□□ -1.09
UBR4-212ENST00000475973 RNMTO43148 476 aaKnown RBP8.23□□□□□ -1.09
UBR4-212ENST00000475973 GIGYF1O75420 1035 aaPredicted RBP8.23□□□□□ -1.09
UBR4-212ENST00000475973 ALDH1L1O75891 902 aa8.23□□□□□ -1.09
UBR4-212ENST00000475973 POTEIP0CG38 1075 aa8.23□□□□□ -1.09
UBR4-212ENST00000475973 ZSCAN22P10073 491 aaPredicted RBP8.23□□□□□ -1.09
UBR4-212ENST00000475973 NECTIN1Q15223 517 aa8.23□□□□□ -1.09
UBR4-212ENST00000475973 HSP90AB4PQ58FF6 505 aa8.23□□□□□ -1.09
UBR4-212ENST00000475973 SMIM5Q71RC9 77 aa8.23□□□□□ -1.09
UBR4-212ENST00000475973 TTC5Q8N0Z6 440 aa8.23□□□□□ -1.09
UBR4-212ENST00000475973 CCDC102AQ96A19 550 aa8.23□□□□□ -1.09
UBR4-212ENST00000475973 SLC4A9Q96Q91 983 aa8.23□□□□□ -1.09
UBR4-212ENST00000475973 PARP3Q9Y6F1 533 aa8.23□□□□□ -1.09
UBR4-212ENST00000475973 ADCY9O60503 1353 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 SIPA1L3O60292 1781 aaPredicted RBP8.22□□□□□ -1.09
UBR4-212ENST00000475973 C10orf71Q711Q0 1435 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 SYCE3A1L190 88 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 GADD45BO75293 160 aaPredicted RBP8.22□□□□□ -1.09
UBR4-212ENST00000475973 UBTFL1P0CB47 393 aaPredicted RBP8.22□□□□□ -1.09
UBR4-212ENST00000475973 FECHP22830 423 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 UBE2HP62256 183 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 TEFQ10587 303 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 ST3GAL1Q11201 340 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 AMHR2Q16671 573 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 CCDC183Q5T5S1 534 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 VPS53Q5VIR6 699 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 RBM43Q6ZSC3 357 aaKnown RBP8.22□□□□□ -1.09
UBR4-212ENST00000475973 RUFY3Q7L099 469 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 PPP1R42Q7Z4L9 355 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 USP48Q86UV5 1035 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 TICAM2Q86XR7 235 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 SYAP1Q96A49 352 aaPredicted RBP8.22□□□□□ -1.09
UBR4-212ENST00000475973 CHAMP1Q96JM3 812 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 TSPY26PQ9H489 355 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 HYPKQ9NX55 129 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 LIMCH1Q9UPQ0 1083 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 MTMR6Q9Y217 621 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 ELP1O95163 1332 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 ITGB4P16144 1822 aa8.22□□□□□ -1.09
UBR4-212ENST00000475973 ZNF831Q5JPB2 1677 aa8.21□□□□□ -1.09
UBR4-212ENST00000475973 GLRX3O76003 335 aaKnown RBP8.21□□□□□ -1.1
UBR4-212ENST00000475973 GYS1P13807 737 aa8.21□□□□□ -1.1
UBR4-212ENST00000475973 SYT1P21579 422 aa8.21□□□□□ -1.1
UBR4-212ENST00000475973 MSNP26038 577 aaKnown RBP8.21□□□□□ -1.1
UBR4-212ENST00000475973 TGFB2P61812 414 aa8.21□□□□□ -1.1
UBR4-212ENST00000475973 PTGDRQ13258 359 aa8.21□□□□□ -1.1
UBR4-212ENST00000475973 FKBP5Q13451 457 aaPredicted RBP8.21□□□□□ -1.1
UBR4-212ENST00000475973 MTERF4Q7Z6M4 381 aaKnown RBP8.21□□□□□ -1.1
UBR4-212ENST00000475973 DNAAF4Q8WXU2 420 aa8.21□□□□□ -1.1
UBR4-212ENST00000475973 PIBF1Q8WXW3 757 aa8.21□□□□□ -1.1
UBR4-212ENST00000475973 ZSCAN31Q96LW9 406 aaPredicted RBP8.21□□□□□ -1.1
UBR4-212ENST00000475973 PHAXQ9H814 394 aaKnown RBP8.21□□□□□ -1.1
UBR4-212ENST00000475973 ANO2Q9NQ90 1003 aa8.21□□□□□ -1.1
UBR4-212ENST00000475973 SH2B1Q9NRF2 756 aaPredicted RBP8.21□□□□□ -1.1
UBR4-212ENST00000475973 CICQ96RK0 1608 aaPredicted RBP8.21□□□□□ -1.1
UBR4-212ENST00000475973 KAT6BQ8WYB5 2073 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 TAF1LQ8IZX4 1826 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 UBR3Q6ZT12 1888 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 ZPR1O75312 459 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 F13A1P00488 732 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 AK2P54819 239 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 USPL1Q5W0Q7 1092 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 TSHZ3Q63HK5 1081 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 SLC4A10Q6U841 1118 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 SASS6Q6UVJ0 657 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 DNAJC10Q8IXB1 793 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 MAP4K1Q92918 833 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 KAZALD1Q96I82 304 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 LGR6Q9HBX8 967 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 USP25Q9UHP3 1055 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.2□□□□□ -1.1
UBR4-212ENST00000475973 RFX7Q2KHR2 1363 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 MED23Q9ULK4 1368 aa8.2□□□□□ -1.1
UBR4-212ENST00000475973 STX6O43752 255 aa8.19□□□□□ -1.1
UBR4-212ENST00000475973 STARD3NLO95772 234 aa8.19□□□□□ -1.1
UBR4-212ENST00000475973 NBPF7P0C2Y1 421 aaPredicted RBP8.19□□□□□ -1.1
UBR4-212ENST00000475973 HMGN5P82970 282 aaKnown RBP8.19□□□□□ -1.1
UBR4-212ENST00000475973 SLC39A6Q13433 755 aa8.19□□□□□ -1.1
UBR4-212ENST00000475973 HDGFL1Q5TGJ6 251 aa8.19□□□□□ -1.1
UBR4-212ENST00000475973 POTEHQ6S545 545 aa8.19□□□□□ -1.1
UBR4-212ENST00000475973 CNTROBQ8N137 903 aa8.19□□□□□ -1.1
UBR4-212ENST00000475973 MYRIPQ8NFW9 859 aa8.19□□□□□ -1.1
UBR4-212ENST00000475973 PRIMPOLQ96LW4 560 aa8.19□□□□□ -1.1
UBR4-212ENST00000475973 WWC3Q9ULE0 1092 aa8.19□□□□□ -1.1
UBR4-212ENST00000475973 BCS1LQ9Y276 419 aa8.19□□□□□ -1.1
UBR4-212ENST00000475973 KCPQ6ZWJ8 1503 aa8.19□□□□□ -1.1
UBR4-212ENST00000475973 KDM4AO75164 1064 aa8.18□□□□□ -1.1
UBR4-212ENST00000475973 SURF6O75683 361 aaKnown RBP8.18□□□□□ -1.1
UBR4-212ENST00000475973 CYP19A1P11511 503 aaPredicted RBP8.18□□□□□ -1.1
UBR4-212ENST00000475973 C1QTNF8P60827 252 aa8.18□□□□□ -1.1
UBR4-212ENST00000475973 GLIPR1L2Q4G1C9 344 aa8.18□□□□□ -1.1
UBR4-212ENST00000475973 INTS5Q6P9B9 1019 aaKnown RBP8.18□□□□□ -1.1
UBR4-212ENST00000475973 ERC1Q8IUD2 1116 aa8.18□□□□□ -1.1
UBR4-212ENST00000475973 EPAS1Q99814 870 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms