RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 ZBTB12Q9Y330 459 aaPredicted RBP11.84□□□□□ -0.51
SEMA3C-208ENST00000475955 PCDHB15Q9Y5E8 787 aa11.84□□□□□ -0.51
SEMA3C-208ENST00000475955 ITGA6P23229 1130 aa11.83□□□□□ -0.52
SEMA3C-208ENST00000475955 LMOD1P29536 600 aaPredicted RBP11.83□□□□□ -0.52
SEMA3C-208ENST00000475955 HIRAP54198 1017 aaPredicted RBP11.83□□□□□ -0.52
SEMA3C-208ENST00000475955 JMYQ8N9B5 988 aa11.83□□□□□ -0.52
SEMA3C-208ENST00000475955 IL27Q8NEV9 243 aa11.83□□□□□ -0.52
SEMA3C-208ENST00000475955 CDC5LQ99459 802 aaKnown RBP11.83□□□□□ -0.52
SEMA3C-208ENST00000475955 GGA1Q9UJY5 639 aa11.83□□□□□ -0.52
SEMA3C-208ENST00000475955 XDHP47989 1333 aa11.83□□□□□ -0.52
SEMA3C-208ENST00000475955 EGFRP00533 1210 aa11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 BRPF1P55201 1214 aaPredicted RBP11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 TNIP1Q15025 636 aa11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 SLC4A10Q6U841 1118 aa11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 ATF7IPQ6VMQ6 1270 aa11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 USP50Q70EL3 339 aaPredicted RBP11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 TXNRD3Q86VQ6 643 aa11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 TRPM4Q8TD43 1214 aa11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 KAZALD1Q96I82 304 aa11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 EYA3Q99504 573 aa11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 BCL2L13Q9BXK5 485 aa11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 ZC3H12CQ9C0D7 883 aaKnown RBP11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 CREBZFQ9NS37 354 aa11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 ADARB2Q9NS39 739 aaKnown RBP11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 SMC4Q9NTJ3 1288 aa11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 CHMP5Q9NZZ3 219 aa11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 CNOT7Q9UIV1 285 aaKnown RBP11.82□□□□□ -0.52
SEMA3C-208ENST00000475955 GRM8O00222 908 aa11.81□□□□□ -0.52
SEMA3C-208ENST00000475955 TRAF5O00463 557 aa11.81□□□□□ -0.52
SEMA3C-208ENST00000475955 ATP2B4P23634 1241 aa11.81□□□□□ -0.52
SEMA3C-208ENST00000475955 KLRK1P26718 216 aa11.81□□□□□ -0.52
SEMA3C-208ENST00000475955 SMC5Q8IY18 1101 aa11.81□□□□□ -0.52
SEMA3C-208ENST00000475955 ANTXR1Q9H6X2 564 aa11.81□□□□□ -0.52
SEMA3C-208ENST00000475955 SNAP23O00161 211 aa11.8□□□□□ -0.52
SEMA3C-208ENST00000475955 ALDH1L1O75891 902 aa11.8□□□□□ -0.52
SEMA3C-208ENST00000475955 VIL1P09327 827 aaKnown RBP11.8□□□□□ -0.52
SEMA3C-208ENST00000475955 NBPF7P0C2Y1 421 aaPredicted RBP11.8□□□□□ -0.52
SEMA3C-208ENST00000475955 RLBP1P12271 317 aa11.8□□□□□ -0.52
SEMA3C-208ENST00000475955 CCT4P50991 539 aaKnown RBP11.8□□□□□ -0.52
SEMA3C-208ENST00000475955 LMBR1LQ6UX01 489 aa11.8□□□□□ -0.52
SEMA3C-208ENST00000475955 SAMD7Q7Z3H4 446 aa11.8□□□□□ -0.52
SEMA3C-208ENST00000475955 MICALL2Q8IY33 904 aa11.8□□□□□ -0.52
SEMA3C-208ENST00000475955 DPF2Q92785 391 aa11.8□□□□□ -0.52
SEMA3C-208ENST00000475955 SRCIN1Q9C0H9 1055 aa11.8□□□□□ -0.52
SEMA3C-208ENST00000475955 MKRN1Q9UHC7 482 aaKnown RBP11.8□□□□□ -0.52
SEMA3C-208ENST00000475955 PGAP2Q9UHJ9 254 aa11.8□□□□□ -0.52
SEMA3C-208ENST00000475955 IRS2Q9Y4H2 1338 aa11.8□□□□□ -0.52
SEMA3C-208ENST00000475955 TMEM88BA6NKF7 163 aa11.79□□□□□ -0.52
SEMA3C-208ENST00000475955 DDX11L8A8MPP1 907 aa11.79□□□□□ -0.52
SEMA3C-208ENST00000475955 IGHMBP2P38935 993 aaKnown RBP11.79□□□□□ -0.52
SEMA3C-208ENST00000475955 CST9Q5W186 159 aa11.79□□□□□ -0.52
SEMA3C-208ENST00000475955 DLK2Q6UY11 383 aa11.79□□□□□ -0.52
SEMA3C-208ENST00000475955 HSCBQ8IWL3 235 aa11.79□□□□□ -0.52
SEMA3C-208ENST00000475955 ARHGAP45Q92619 1136 aa11.79□□□□□ -0.52
SEMA3C-208ENST00000475955 SUCLG2Q96I99 432 aa11.79□□□□□ -0.52
SEMA3C-208ENST00000475955 ZNF594Q96JF6 807 aaPredicted RBP11.79□□□□□ -0.52
SEMA3C-208ENST00000475955 C22orf23Q9BZE7 217 aa11.79□□□□□ -0.52
SEMA3C-208ENST00000475955 CIZ1Q9ULV3 898 aaPredicted RBP11.79□□□□□ -0.52
SEMA3C-208ENST00000475955 UTYO14607 1347 aa11.79□□□□□ -0.52
SEMA3C-208ENST00000475955 MED23Q9ULK4 1368 aa11.79□□□□□ -0.52
SEMA3C-208ENST00000475955 ANKRD18BA2A2Z9 1011 aa11.78□□□□□ -0.52
SEMA3C-208ENST00000475955 CHRNDQ07001 517 aa11.78□□□□□ -0.52
SEMA3C-208ENST00000475955 HELBQ8NG08 1087 aaPredicted RBP11.78□□□□□ -0.52
SEMA3C-208ENST00000475955 GMLQ99445 158 aa11.78□□□□□ -0.52
SEMA3C-208ENST00000475955 MXD3Q9BW11 206 aa11.78□□□□□ -0.52
SEMA3C-208ENST00000475955 TBC1D2Q9BYX2 928 aa11.78□□□□□ -0.52
SEMA3C-208ENST00000475955 GLIS2Q9BZE0 524 aaPredicted RBP11.78□□□□□ -0.52
SEMA3C-208ENST00000475955 C9orf78Q9NZ63 289 aaPredicted RBP11.78□□□□□ -0.52
SEMA3C-208ENST00000475955 PTPRCP08575 1304 aa11.78□□□□□ -0.52
SEMA3C-208ENST00000475955 CNTNAP1P78357 1384 aa11.78□□□□□ -0.52
SEMA3C-208ENST00000475955 ZNF609O15014 1411 aa11.77□□□□□ -0.52
SEMA3C-208ENST00000475955 H7C1D1 291 aa11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 TAF5LO75529 589 aa11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 SEC24BO95487 1268 aa11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 RPS12P25398 132 aaKnown RBP11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 IFIT5Q13325 482 aaKnown RBP11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 TBC1D10BQ4KMP7 808 aaPredicted RBP11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 ANKRD44Q8N8A2 993 aa11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 SNX21Q969T3 373 aa11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 GCC1Q96CN9 775 aa11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 MPHOSPH8Q99549 860 aa11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 USP44Q9H0E7 712 aa11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 BRPF3Q9ULD4 1205 aa11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 LEMD3Q9Y2U8 911 aa11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 CHMP3Q9Y3E7 222 aa11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 ZNF804BA4D1E1 1349 aa11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 ASTN2O75129 1339 aaPredicted RBP11.77□□□□□ -0.53
SEMA3C-208ENST00000475955 G3V3G9 751 aa11.76□□□□□ -0.53
SEMA3C-208ENST00000475955 TRIM27P14373 513 aa11.76□□□□□ -0.53
SEMA3C-208ENST00000475955 MCM4P33991 863 aa11.76□□□□□ -0.53
SEMA3C-208ENST00000475955 RBM26Q5T8P6 1007 aaKnown RBP11.76□□□□□ -0.53
SEMA3C-208ENST00000475955 DCAF8Q5TAQ9 597 aa11.76□□□□□ -0.53
SEMA3C-208ENST00000475955 RSBN1LQ6PCB5 846 aaPredicted RBP11.76□□□□□ -0.53
SEMA3C-208ENST00000475955 PODNQ7Z5L7 613 aa11.76□□□□□ -0.53
SEMA3C-208ENST00000475955 ITPRIPQ8IWB1 547 aa11.76□□□□□ -0.53
SEMA3C-208ENST00000475955 ZC3H15Q8WU90 426 aaKnown RBP11.76□□□□□ -0.53
SEMA3C-208ENST00000475955 PUS3Q9BZE2 481 aaKnown RBP11.76□□□□□ -0.53
SEMA3C-208ENST00000475955 ANKRD2Q9GZV1 360 aa11.76□□□□□ -0.53
SEMA3C-208ENST00000475955 ZBTB40Q9NUA8 1239 aa11.76□□□□□ -0.53
SEMA3C-208ENST00000475955 USP17L3A6NCW0 530 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms