RNA–Protein interactions for RNA: ENST00000475775.1

TRIM11-203, Transcript of tripartite motif containing 11, humanhuman

TSL 2

Gene TRIM11, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-203ENST00000475775 ZNF296Q8WUU4 475 aaPredicted RBP18.89■□□□□ 0.61
TRIM11-203ENST00000475775 CDCA5Q96FF9 252 aa18.89■□□□□ 0.61
TRIM11-203ENST00000475775 TBC1D8O95759 1140 aa18.88■□□□□ 0.61
TRIM11-203ENST00000475775 GGA3Q9NZ52 723 aa18.88■□□□□ 0.61
TRIM11-203ENST00000475775 KIAA0100Q14667 2235 aaKnown RBP18.88■□□□□ 0.61
TRIM11-203ENST00000475775 ASTN2O75129 1339 aaPredicted RBP18.87■□□□□ 0.61
TRIM11-203ENST00000475775 IGKV5-2P06315 115 aa18.87■□□□□ 0.61
TRIM11-203ENST00000475775 RSBN1LQ6PCB5 846 aaPredicted RBP18.87■□□□□ 0.61
TRIM11-203ENST00000475775 PODNQ7Z5L7 613 aa18.87■□□□□ 0.61
TRIM11-203ENST00000475775 JARID2Q92833 1246 aaPredicted RBP18.87■□□□□ 0.61
TRIM11-203ENST00000475775 MYH16Q9H6N6 1097 aa18.87■□□□□ 0.61
TRIM11-203ENST00000475775 MED23Q9ULK4 1368 aa18.87■□□□□ 0.61
TRIM11-203ENST00000475775 BRCA2P51587 3418 aa18.87■□□□□ 0.61
TRIM11-203ENST00000475775 NEURL1BA8MQ27 555 aa18.86■□□□□ 0.61
TRIM11-203ENST00000475775 SLC4A2P04920 1241 aa18.86■□□□□ 0.61
TRIM11-203ENST00000475775 HABP4Q5JVS0 413 aaKnown RBP18.86■□□□□ 0.61
TRIM11-203ENST00000475775 TTLL11Q8NHH1 800 aa18.86■□□□□ 0.61
TRIM11-203ENST00000475775 BSDC1Q9NW68 430 aaPredicted RBP18.86■□□□□ 0.61
TRIM11-203ENST00000475775 PSME4Q14997 1843 aa18.86■□□□□ 0.61
TRIM11-203ENST00000475775 PAPPA2Q9BXP8 1791 aa18.86■□□□□ 0.61
TRIM11-203ENST00000475775 IGHMBP2P38935 993 aaKnown RBP18.85■□□□□ 0.61
TRIM11-203ENST00000475775 CWF19L2Q2TBE0 894 aaKnown RBP18.85■□□□□ 0.61
TRIM11-203ENST00000475775 FBXO46Q6PJ61 603 aaPredicted RBP18.85■□□□□ 0.61
TRIM11-203ENST00000475775 HTTP42858 3142 aa18.85■□□□□ 0.61
TRIM11-203ENST00000475775 ZNF280AP59817 542 aaPredicted RBP18.84■□□□□ 0.61
TRIM11-203ENST00000475775 FLIIQ13045 1269 aa18.84■□□□□ 0.61
TRIM11-203ENST00000475775 FKBP5Q13451 457 aaPredicted RBP18.84■□□□□ 0.61
TRIM11-203ENST00000475775 GREM2Q9H772 168 aa18.84■□□□□ 0.61
TRIM11-203ENST00000475775 MYO3BQ8WXR4 1341 aa18.83■□□□□ 0.61
TRIM11-203ENST00000475775 FANCIQ9NVI1 1328 aa18.83■□□□□ 0.61
TRIM11-203ENST00000475775 USP17L3A6NCW0 530 aa18.83■□□□□ 0.6
TRIM11-203ENST00000475775 USP17L4A6NCW7 530 aa18.83■□□□□ 0.6
TRIM11-203ENST00000475775 USP17L8P0C7I0 530 aa18.83■□□□□ 0.6
TRIM11-203ENST00000475775 FKBP1BP68106 108 aa18.83■□□□□ 0.6
TRIM11-203ENST00000475775 ANGEL2Q5VTE6 544 aaKnown RBP18.83■□□□□ 0.6
TRIM11-203ENST00000475775 USP17L1Q7RTZ2 530 aa18.83■□□□□ 0.6
TRIM11-203ENST00000475775 UBE3BQ7Z3V4 1068 aa18.83■□□□□ 0.6
TRIM11-203ENST00000475775 H7C1W4 665 aa18.82■□□□□ 0.6
TRIM11-203ENST00000475775 GPR25O00155 361 aa18.82■□□□□ 0.6
TRIM11-203ENST00000475775 CCT4P50991 539 aaKnown RBP18.82■□□□□ 0.6
TRIM11-203ENST00000475775 SCARF1Q14162 830 aa18.82■□□□□ 0.6
TRIM11-203ENST00000475775 GCKRQ14397 625 aa18.82■□□□□ 0.6
TRIM11-203ENST00000475775 MOB2Q70IA6 237 aa18.82■□□□□ 0.6
TRIM11-203ENST00000475775 WDR63Q8IWG1 891 aa18.82■□□□□ 0.6
TRIM11-203ENST00000475775 PLA2G12BQ9BX93 195 aa18.82■□□□□ 0.6
TRIM11-203ENST00000475775 MYOZ2Q9NPC6 264 aa18.82■□□□□ 0.6
TRIM11-203ENST00000475775 MINPP1Q9UNW1 487 aa18.82■□□□□ 0.6
TRIM11-203ENST00000475775 LEMD3Q9Y2U8 911 aa18.82■□□□□ 0.6
TRIM11-203ENST00000475775 PITPNM2Q9BZ72 1349 aa18.81■□□□□ 0.6
TRIM11-203ENST00000475775 OGFOD1Q8N543 542 aa18.81■□□□□ 0.6
TRIM11-203ENST00000475775 LINS1Q8NG48 757 aa18.81■□□□□ 0.6
TRIM11-203ENST00000475775 DNAAF4Q8WXU2 420 aa18.81■□□□□ 0.6
TRIM11-203ENST00000475775 MPHOSPH8Q99549 860 aa18.81■□□□□ 0.6
TRIM11-203ENST00000475775 ANKRD2Q9GZV1 360 aa18.81■□□□□ 0.6
TRIM11-203ENST00000475775 COA1Q9GZY4 146 aa18.81■□□□□ 0.6
TRIM11-203ENST00000475775 UBE2Q2LH0YL09 131 aa18.8■□□□□ 0.6
TRIM11-203ENST00000475775 TM4SF4P48230 202 aa18.8■□□□□ 0.6
TRIM11-203ENST00000475775 MMP14P50281 582 aa18.8■□□□□ 0.6
TRIM11-203ENST00000475775 G2E3Q7L622 706 aa18.8■□□□□ 0.6
TRIM11-203ENST00000475775 ITGA6P23229 1130 aa18.79■□□□□ 0.6
TRIM11-203ENST00000475775 NOM1Q5C9Z4 860 aaKnown RBP18.79■□□□□ 0.6
TRIM11-203ENST00000475775 GMLQ99445 158 aa18.79■□□□□ 0.6
TRIM11-203ENST00000475775 SZT2Q5T011 3432 aa18.78■□□□□ 0.6
TRIM11-203ENST00000475775 STRIP1Q5VSL9 837 aa18.78■□□□□ 0.6
TRIM11-203ENST00000475775 SCAF8Q9UPN6 1271 aaKnown RBP18.78■□□□□ 0.6
TRIM11-203ENST00000475775 RBBP6Q7Z6E9 1792 aaKnown RBP18.78■□□□□ 0.6
TRIM11-203ENST00000475775 ZNF804BA4D1E1 1349 aa18.77■□□□□ 0.6
TRIM11-203ENST00000475775 MYH3P11055 1940 aa18.77■□□□□ 0.6
TRIM11-203ENST00000475775 FKTNO75072 461 aa18.77■□□□□ 0.6
TRIM11-203ENST00000475775 KCNJ4P48050 445 aa18.77■□□□□ 0.6
TRIM11-203ENST00000475775 FAM9BQ8IZU0 186 aa18.77■□□□□ 0.6
TRIM11-203ENST00000475775 FBXW7Q969H0 707 aa18.77■□□□□ 0.6
TRIM11-203ENST00000475775 ANKRD18BA2A2Z9 1011 aa18.76■□□□□ 0.59
TRIM11-203ENST00000475775 VAMP4O75379 141 aa18.76■□□□□ 0.59
TRIM11-203ENST00000475775 CSF1RP07333 972 aa18.76■□□□□ 0.59
TRIM11-203ENST00000475775 MKRN3Q13064 507 aaKnown RBP18.76■□□□□ 0.59
TRIM11-203ENST00000475775 DACT2Q5SW24 774 aa18.76■□□□□ 0.59
TRIM11-203ENST00000475775 PRAMEF18Q5VWM3 479 aa18.76■□□□□ 0.59
TRIM11-203ENST00000475775 R3HDMLQ9H3Y0 253 aa18.76■□□□□ 0.59
TRIM11-203ENST00000475775 CEP290O15078 2479 aa18.76■□□□□ 0.59
TRIM11-203ENST00000475775 CASP7P55210 303 aa18.75■□□□□ 0.59
TRIM11-203ENST00000475775 EXOSC9Q06265 439 aaKnown RBP18.75■□□□□ 0.59
TRIM11-203ENST00000475775 TTLL12Q14166 644 aaPredicted RBP18.75■□□□□ 0.59
TRIM11-203ENST00000475775 SALL2Q9Y467 1007 aaPredicted RBP18.75■□□□□ 0.59
TRIM11-203ENST00000475775 POTEFA5A3E0 1075 aa18.74■□□□□ 0.59
TRIM11-203ENST00000475775 SPEF2Q9C093 1822 aa18.73■□□□□ 0.59
TRIM11-203ENST00000475775 NF2P35240 595 aa18.73■□□□□ 0.59
TRIM11-203ENST00000475775 FXR1P51114 621 aaKnown RBP eCLIP18.73■□□□□ 0.59
TRIM11-203ENST00000475775 SREBF2Q12772 1141 aa18.73■□□□□ 0.59
TRIM11-203ENST00000475775 IFIT5Q13325 482 aaKnown RBP18.73■□□□□ 0.59
TRIM11-203ENST00000475775 CFHR5Q9BXR6 569 aa18.73■□□□□ 0.59
TRIM11-203ENST00000475775 CHRNDQ07001 517 aa18.72■□□□□ 0.59
TRIM11-203ENST00000475775 INTS3Q68E01 1043 aaKnown RBP18.72■□□□□ 0.59
TRIM11-203ENST00000475775 TTLL5Q6EMB2 1281 aa18.72■□□□□ 0.59
TRIM11-203ENST00000475775 WTIPA6NIX2 430 aaPredicted RBP18.71■□□□□ 0.59
TRIM11-203ENST00000475775 APOBEC3FQ8IUX4 373 aaKnown RBP18.71■□□□□ 0.59
TRIM11-203ENST00000475775 CHMP3Q9Y3E7 222 aa18.71■□□□□ 0.59
TRIM11-203ENST00000475775 TRIM17Q9Y577 477 aa18.71■□□□□ 0.59
TRIM11-203ENST00000475775 TRIOBPQ9H2D6 2365 aa18.7■□□□□ 0.58
TRIM11-203ENST00000475775 WNT10BO00744 389 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms