RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 NEUROD2Q15784 382 aa13.66□□□□□ -0.22
CALD1-217ENST00000475772 HSP90AB3PQ58FF7 597 aa13.66□□□□□ -0.22
CALD1-217ENST00000475772 CIAPIN1Q6FI81 312 aa13.66□□□□□ -0.22
CALD1-217ENST00000475772 SUPT20HQ8NEM7 779 aa13.66□□□□□ -0.22
CALD1-217ENST00000475772 GRAPLQ8TC17 118 aaPredicted RBP13.66□□□□□ -0.22
CALD1-217ENST00000475772 GPR101Q96P66 508 aaPredicted RBP13.66□□□□□ -0.22
CALD1-217ENST00000475772 ISCA1Q9BUE6 129 aa13.66□□□□□ -0.22
CALD1-217ENST00000475772 GLIS2Q9BZE0 524 aaPredicted RBP13.66□□□□□ -0.22
CALD1-217ENST00000475772 DUOX1Q9NRD9 1551 aa13.66□□□□□ -0.22
CALD1-217ENST00000475772 SH3TC1Q8TE82 1336 aa13.65□□□□□ -0.22
CALD1-217ENST00000475772 AOC2O75106 756 aa13.65□□□□□ -0.22
CALD1-217ENST00000475772 FOSBP53539 338 aa13.65□□□□□ -0.22
CALD1-217ENST00000475772 DLK2Q6UY11 383 aa13.65□□□□□ -0.22
CALD1-217ENST00000475772 SAPCD2Q86UD0 394 aa13.65□□□□□ -0.22
CALD1-217ENST00000475772 TRPM4Q8TD43 1214 aa13.65□□□□□ -0.22
CALD1-217ENST00000475772 CHPF2Q9P2E5 772 aa13.65□□□□□ -0.22
CALD1-217ENST00000475772 ECE1P42892 770 aa13.64□□□□□ -0.23
CALD1-217ENST00000475772 SF3B3Q15393 1217 aaKnown RBP13.64□□□□□ -0.23
CALD1-217ENST00000475772 DDX46Q7L014 1031 aaKnown RBP13.64□□□□□ -0.23
CALD1-217ENST00000475772 CELF1Q92879 486 aaKnown RBP13.64□□□□□ -0.23
CALD1-217ENST00000475772 ABHD8Q96I13 439 aa13.64□□□□□ -0.23
CALD1-217ENST00000475772 TMX4Q9H1E5 349 aaPredicted RBP13.64□□□□□ -0.23
CALD1-217ENST00000475772 CNOT7Q9UIV1 285 aaKnown RBP13.64□□□□□ -0.23
CALD1-217ENST00000475772 LRRC37AA6NMS7 1700 aa13.64□□□□□ -0.23
CALD1-217ENST00000475772 ATP5J2-PTCD1G3V325 749 aa13.63□□□□□ -0.23
CALD1-217ENST00000475772 CELF2O95319 508 aaKnown RBP13.63□□□□□ -0.23
CALD1-217ENST00000475772 LMOD3Q0VAK6 560 aa13.63□□□□□ -0.23
CALD1-217ENST00000475772 GRM1Q13255 1194 aa13.63□□□□□ -0.23
CALD1-217ENST00000475772 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
CALD1-217ENST00000475772 PLBD2Q8NHP8 589 aa13.63□□□□□ -0.23
CALD1-217ENST00000475772 FAM89AQ96GI7 184 aa13.63□□□□□ -0.23
CALD1-217ENST00000475772 KCNQ5Q9NR82 932 aa13.63□□□□□ -0.23
CALD1-217ENST00000475772 POLLQ9UGP5 575 aa13.63□□□□□ -0.23
CALD1-217ENST00000475772 LAS1LQ9Y4W2 734 aaKnown RBP13.63□□□□□ -0.23
CALD1-217ENST00000475772 SCN9AQ15858 1988 aa13.62□□□□□ -0.23
CALD1-217ENST00000475772 MAP2K2P36507 400 aa13.62□□□□□ -0.23
CALD1-217ENST00000475772 TNIP1Q15025 636 aa13.62□□□□□ -0.23
CALD1-217ENST00000475772 ZNF454Q8N9F8 522 aa13.62□□□□□ -0.23
CALD1-217ENST00000475772 ZC3H15Q8WU90 426 aaKnown RBP13.62□□□□□ -0.23
CALD1-217ENST00000475772 RUNDC1Q96C34 613 aa13.62□□□□□ -0.23
CALD1-217ENST00000475772 ZIC5Q96T25 663 aa13.62□□□□□ -0.23
CALD1-217ENST00000475772 BCL2L13Q9BXK5 485 aa13.62□□□□□ -0.23
CALD1-217ENST00000475772 TSKSQ9UJT2 592 aa13.62□□□□□ -0.23
CALD1-217ENST00000475772 ADAMTS8Q9UP79 889 aa13.62□□□□□ -0.23
CALD1-217ENST00000475772 PCDHGA10Q9Y5H3 936 aa13.62□□□□□ -0.23
CALD1-217ENST00000475772 PSMD14O00487 310 aa13.61□□□□□ -0.23
CALD1-217ENST00000475772 EGFRP00533 1210 aa13.61□□□□□ -0.23
CALD1-217ENST00000475772 GPSM2P81274 684 aa13.61□□□□□ -0.23
CALD1-217ENST00000475772 DDX10Q13206 875 aaKnown RBP13.61□□□□□ -0.23
CALD1-217ENST00000475772 HDGFL1Q5TGJ6 251 aa13.61□□□□□ -0.23
CALD1-217ENST00000475772 SAMD7Q7Z3H4 446 aa13.61□□□□□ -0.23
CALD1-217ENST00000475772 ZNF687Q8N1G0 1237 aa13.61□□□□□ -0.23
CALD1-217ENST00000475772 DDX12PQ92771 950 aa13.61□□□□□ -0.23
CALD1-217ENST00000475772 HHIPL1Q96JK4 782 aa13.61□□□□□ -0.23
CALD1-217ENST00000475772 CDHR2Q9BYE9 1310 aa13.61□□□□□ -0.23
CALD1-217ENST00000475772 HOXB7P09629 217 aa13.6□□□□□ -0.23
CALD1-217ENST00000475772 ZNF853P0CG23 659 aa13.6□□□□□ -0.23
CALD1-217ENST00000475772 TRIM28Q13263 835 aaKnown RBP13.6□□□□□ -0.23
CALD1-217ENST00000475772 WASHC4Q2M389 1173 aa13.6□□□□□ -0.23
CALD1-217ENST00000475772 RTL5Q5HYW3 569 aaPredicted RBP13.6□□□□□ -0.23
CALD1-217ENST00000475772 DUSP27Q5VZP5 1158 aa13.6□□□□□ -0.23
CALD1-217ENST00000475772 CDC37L1Q7L3B6 337 aa13.6□□□□□ -0.23
CALD1-217ENST00000475772 TMC4Q7Z404 712 aa13.6□□□□□ -0.23
CALD1-217ENST00000475772 DPF2Q92785 391 aa13.6□□□□□ -0.23
CALD1-217ENST00000475772 DBNDD1Q9H9R9 158 aa13.6□□□□□ -0.23
CALD1-217ENST00000475772 DBF4Q9UBU7 674 aaPredicted RBP13.6□□□□□ -0.23
CALD1-217ENST00000475772 NSFL1CQ9UNZ2 370 aaKnown RBP13.6□□□□□ -0.23
CALD1-217ENST00000475772 MYBBP1AQ9BQG0 1328 aaKnown RBP13.6□□□□□ -0.23
CALD1-217ENST00000475772 RTL9Q8NET4 1388 aa13.59□□□□□ -0.23
CALD1-217ENST00000475772 SEMA3EO15041 775 aa13.59□□□□□ -0.23
CALD1-217ENST00000475772 PPP4R3BQ5MIZ7 849 aa13.59□□□□□ -0.23
CALD1-217ENST00000475772 USP48Q86UV5 1035 aa13.59□□□□□ -0.23
CALD1-217ENST00000475772 MBIPQ9NS73 344 aa13.59□□□□□ -0.23
CALD1-217ENST00000475772 H7C1D1 291 aa13.58□□□□□ -0.24
CALD1-217ENST00000475772 PHAXQ9H814 394 aaKnown RBP13.58□□□□□ -0.24
CALD1-217ENST00000475772 ZNF408Q9H9D4 720 aa13.58□□□□□ -0.24
CALD1-217ENST00000475772 SEC31BQ9NQW1 1179 aa13.58□□□□□ -0.24
CALD1-217ENST00000475772 IRS4O14654 1257 aaPredicted RBP13.57□□□□□ -0.24
CALD1-217ENST00000475772 RPS8P62241 208 aaKnown RBP13.57□□□□□ -0.24
CALD1-217ENST00000475772 TBC1D16Q8TBP0 767 aa13.57□□□□□ -0.24
CALD1-217ENST00000475772 BEGAINQ9BUH8 593 aa13.57□□□□□ -0.24
CALD1-217ENST00000475772 HYPKQ9NX55 129 aa13.57□□□□□ -0.24
CALD1-217ENST00000475772 C6orf229H3BNL8 230 aa13.56□□□□□ -0.24
CALD1-217ENST00000475772 ECE2O60344 883 aa13.56□□□□□ -0.24
CALD1-217ENST00000475772 MLLT3P42568 568 aaPredicted RBP13.56□□□□□ -0.24
CALD1-217ENST00000475772 RGS19P49795 217 aa13.56□□□□□ -0.24
CALD1-217ENST00000475772 TBC1D10BQ4KMP7 808 aaPredicted RBP13.56□□□□□ -0.24
CALD1-217ENST00000475772 ZDHHC16Q969W1 377 aa13.56□□□□□ -0.24
CALD1-217ENST00000475772 EPAS1Q99814 870 aa13.56□□□□□ -0.24
CALD1-217ENST00000475772 GRXCR2A6NFK2 248 aa13.55□□□□□ -0.24
CALD1-217ENST00000475772 FAM155AB1AL88 458 aaPredicted RBP13.55□□□□□ -0.24
CALD1-217ENST00000475772 VIL1P09327 827 aaKnown RBP13.55□□□□□ -0.24
CALD1-217ENST00000475772 BRPF1P55201 1214 aaPredicted RBP13.55□□□□□ -0.24
CALD1-217ENST00000475772 FAM161AQ3B820 660 aa13.55□□□□□ -0.24
CALD1-217ENST00000475772 RBM26Q5T8P6 1007 aaKnown RBP13.55□□□□□ -0.24
CALD1-217ENST00000475772 POTEEQ6S8J3 1075 aa13.55□□□□□ -0.24
CALD1-217ENST00000475772 CDAN1Q8IWY9 1227 aa13.55□□□□□ -0.24
CALD1-217ENST00000475772 ZBTB38Q8NAP3 1195 aaPredicted RBP13.55□□□□□ -0.24
CALD1-217ENST00000475772 JARID2Q92833 1246 aaPredicted RBP13.55□□□□□ -0.24
CALD1-217ENST00000475772 PODXL2Q9NZ53 605 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms