RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 C8orf58Q8NAV2 365 aa26.36■■□□□ 1.81
VPS36-203ENST00000475375 MXD3Q9BW11 206 aa26.36■■□□□ 1.81
VPS36-203ENST00000475375 PSME4Q14997 1843 aa26.35■■□□□ 1.81
VPS36-203ENST00000475375 NF2P35240 595 aa26.35■■□□□ 1.81
VPS36-203ENST00000475375 HPS5Q9UPZ3 1129 aa26.35■■□□□ 1.81
VPS36-203ENST00000475375 MED23Q9ULK4 1368 aa26.34■■□□□ 1.81
VPS36-203ENST00000475375 MKRN3Q13064 507 aaKnown RBP26.34■■□□□ 1.81
VPS36-203ENST00000475375 CHMP4AQ9BY43 222 aa26.34■■□□□ 1.81
VPS36-203ENST00000475375 MINPP1Q9UNW1 487 aa26.34■■□□□ 1.81
VPS36-203ENST00000475375 ZNF296Q8WUU4 475 aaPredicted RBP26.33■■□□□ 1.81
VPS36-203ENST00000475375 GREM2Q9H772 168 aa26.33■■□□□ 1.81
VPS36-203ENST00000475375 BSDC1Q9NW68 430 aaPredicted RBP26.33■■□□□ 1.81
VPS36-203ENST00000475375 PCDH10Q9P2E7 1040 aa26.33■■□□□ 1.81
VPS36-203ENST00000475375 CCT4P50991 539 aaKnown RBP26.32■■□□□ 1.8
VPS36-203ENST00000475375 NEXNQ0ZGT2 675 aa26.32■■□□□ 1.8
VPS36-203ENST00000475375 PKN2Q16513 984 aaKnown RBP26.32■■□□□ 1.8
VPS36-203ENST00000475375 DACT2Q5SW24 774 aa26.32■■□□□ 1.8
VPS36-203ENST00000475375 TTLL11Q8NHH1 800 aa26.32■■□□□ 1.8
VPS36-203ENST00000475375 MYO3BQ8WXR4 1341 aa26.31■■□□□ 1.8
VPS36-203ENST00000475375 PI4KAP2A4QPH2 592 aa26.3■■□□□ 1.8
VPS36-203ENST00000475375 WNT10BO00744 389 aa26.3■■□□□ 1.8
VPS36-203ENST00000475375 SASH1O94885 1247 aa26.3■■□□□ 1.8
VPS36-203ENST00000475375 IGKV5-2P06315 115 aa26.3■■□□□ 1.8
VPS36-203ENST00000475375 STRIP1Q5VSL9 837 aa26.3■■□□□ 1.8
VPS36-203ENST00000475375 KSR2Q6VAB6 950 aa26.3■■□□□ 1.8
VPS36-203ENST00000475375 PI4KAP1Q8N8J0 262 aa26.3■■□□□ 1.8
VPS36-203ENST00000475375 COA1Q9GZY4 146 aa26.3■■□□□ 1.8
VPS36-203ENST00000475375 PRKG1Q13976 671 aa26.29■■□□□ 1.8
VPS36-203ENST00000475375 IGHMBP2P38935 993 aaKnown RBP26.28■■□□□ 1.8
VPS36-203ENST00000475375 ARMC9Q7Z3E5 817 aa26.28■■□□□ 1.8
VPS36-203ENST00000475375 GPR25O00155 361 aa26.27■■□□□ 1.8
VPS36-203ENST00000475375 TM4SF4P48230 202 aa26.27■■□□□ 1.8
VPS36-203ENST00000475375 SREBF2Q12772 1141 aa26.27■■□□□ 1.8
VPS36-203ENST00000475375 CWF19L2Q2TBE0 894 aaKnown RBP26.27■■□□□ 1.8
VPS36-203ENST00000475375 PRPF38BQ5VTL8 546 aaKnown RBP26.27■■□□□ 1.8
VPS36-203ENST00000475375 TSPYL6Q8N831 410 aa26.27■■□□□ 1.8
VPS36-203ENST00000475375 STK31Q9BXU1 1019 aa26.27■■□□□ 1.8
VPS36-203ENST00000475375 SPEF2Q9C093 1822 aa26.27■■□□□ 1.8
VPS36-203ENST00000475375 TTLL5Q6EMB2 1281 aa26.26■■□□□ 1.79
VPS36-203ENST00000475375 UBE3BQ7Z3V4 1068 aa26.26■■□□□ 1.79
VPS36-203ENST00000475375 TXNRD3Q86VQ6 643 aa26.26■■□□□ 1.79
VPS36-203ENST00000475375 KIAA0825Q8IV33 1275 aa26.26■■□□□ 1.79
VPS36-203ENST00000475375 LEMD3Q9Y2U8 911 aa26.26■■□□□ 1.79
VPS36-203ENST00000475375 PTPN12Q05209 780 aaKnown RBP26.25■■□□□ 1.79
VPS36-203ENST00000475375 APOBEC3FQ8IUX4 373 aaKnown RBP26.25■■□□□ 1.79
VPS36-203ENST00000475375 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.25■■□□□ 1.79
VPS36-203ENST00000475375 NEURL1BA8MQ27 555 aa26.24■■□□□ 1.79
VPS36-203ENST00000475375 ZNF804BA4D1E1 1349 aa26.23■■□□□ 1.79
VPS36-203ENST00000475375 KCNJ4P48050 445 aa26.23■■□□□ 1.79
VPS36-203ENST00000475375 MMP14P50281 582 aa26.23■■□□□ 1.79
VPS36-203ENST00000475375 MPHOSPH8Q99549 860 aa26.23■■□□□ 1.79
VPS36-203ENST00000475375 ANKRD2Q9GZV1 360 aa26.23■■□□□ 1.79
VPS36-203ENST00000475375 MYH3P11055 1940 aa26.22■■□□□ 1.79
VPS36-203ENST00000475375 FKTNO75072 461 aa26.22■■□□□ 1.79
VPS36-203ENST00000475375 KLRK1P26718 216 aa26.22■■□□□ 1.79
VPS36-203ENST00000475375 GTF2IP78347 998 aa26.22■■□□□ 1.79
VPS36-203ENST00000475375 FBXO46Q6PJ61 603 aaPredicted RBP26.22■■□□□ 1.79
VPS36-203ENST00000475375 TSR2Q969E8 191 aaKnown RBP26.22■■□□□ 1.79
VPS36-203ENST00000475375 PRKRIP1Q9H875 184 aaPredicted RBP26.22■■□□□ 1.79
VPS36-203ENST00000475375 ANGEL1Q9UNK9 670 aaKnown RBP26.22■■□□□ 1.79
VPS36-203ENST00000475375 ITGA6P23229 1130 aa26.21■■□□□ 1.79
VPS36-203ENST00000475375 NOM1Q5C9Z4 860 aaKnown RBP26.21■■□□□ 1.79
VPS36-203ENST00000475375 H7C1W4 665 aa26.19■■□□□ 1.78
VPS36-203ENST00000475375 SPRYD7Q5W111 196 aa26.19■■□□□ 1.78
VPS36-203ENST00000475375 R3HDMLQ9H3Y0 253 aa26.19■■□□□ 1.78
VPS36-203ENST00000475375 DLGAP5Q15398 846 aa26.18■■□□□ 1.78
VPS36-203ENST00000475375 FZD1Q9UP38 647 aa26.18■■□□□ 1.78
VPS36-203ENST00000475375 ZNF646O15015 1829 aaPredicted RBP26.18■■□□□ 1.78
VPS36-203ENST00000475375 SLC4A2P04920 1241 aa26.17■■□□□ 1.78
VPS36-203ENST00000475375 LDLRAD1Q5T700 205 aa26.17■■□□□ 1.78
VPS36-203ENST00000475375 G2E3Q7L622 706 aa26.17■■□□□ 1.78
VPS36-203ENST00000475375 SLC10A4Q96EP9 437 aa26.17■■□□□ 1.78
VPS36-203ENST00000475375 DEFB129Q9H1M3 183 aa26.17■■□□□ 1.78
VPS36-203ENST00000475375 ALDH1A1P00352 501 aa26.16■■□□□ 1.78
VPS36-203ENST00000475375 CHRNDQ07001 517 aa26.16■■□□□ 1.78
VPS36-203ENST00000475375 GCKRQ14397 625 aa26.16■■□□□ 1.78
VPS36-203ENST00000475375 TWISTNBQ3B726 338 aaPredicted RBP26.16■■□□□ 1.78
VPS36-203ENST00000475375 ZBED3Q96IU2 234 aaPredicted RBP26.16■■□□□ 1.78
VPS36-203ENST00000475375 CFHR5Q9BXR6 569 aa26.16■■□□□ 1.78
VPS36-203ENST00000475375 MYH16Q9H6N6 1097 aa26.16■■□□□ 1.78
VPS36-203ENST00000475375 PLA2G12BQ9BX93 195 aa26.15■■□□□ 1.78
VPS36-203ENST00000475375 CD209Q9NNX6 404 aa26.15■■□□□ 1.78
VPS36-203ENST00000475375 MANSC4A6NHS7 340 aaPredicted RBP26.14■■□□□ 1.78
VPS36-203ENST00000475375 COL1A1P02452 1464 aaPredicted RBP26.13■■□□□ 1.77
VPS36-203ENST00000475375 F8W031 263 aaPredicted RBP26.13■■□□□ 1.77
VPS36-203ENST00000475375 PPP1R12BO60237 982 aaPredicted RBP26.13■■□□□ 1.77
VPS36-203ENST00000475375 ANKRD18BA2A2Z9 1011 aa26.12■■□□□ 1.77
VPS36-203ENST00000475375 INHBEP58166 350 aa26.12■■□□□ 1.77
VPS36-203ENST00000475375 FKBP5Q13451 457 aaPredicted RBP26.12■■□□□ 1.77
VPS36-203ENST00000475375 IFNL1Q8IU54 200 aa26.12■■□□□ 1.77
VPS36-203ENST00000475375 CLMNQ96JQ2 1002 aa26.12■■□□□ 1.77
VPS36-203ENST00000475375 TRIM17Q9Y577 477 aa26.12■■□□□ 1.77
VPS36-203ENST00000475375 SNAP23O00161 211 aa26.11■■□□□ 1.77
VPS36-203ENST00000475375 MYO1BO43795 1136 aa26.11■■□□□ 1.77
VPS36-203ENST00000475375 CSF1RP07333 972 aa26.11■■□□□ 1.77
VPS36-203ENST00000475375 FLIIQ13045 1269 aa26.11■■□□□ 1.77
VPS36-203ENST00000475375 CERS5Q8N5B7 392 aa26.11■■□□□ 1.77
VPS36-203ENST00000475375 HELBQ8NG08 1087 aaPredicted RBP26.11■■□□□ 1.77
VPS36-203ENST00000475375 CHMP3Q9Y3E7 222 aa26.11■■□□□ 1.77
VPS36-203ENST00000475375 CLRN2A0PK11 232 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms