RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 ZNF772Q68DY9 489 aaPredicted RBP11.86□□□□□ -0.51
ITGA6-210ENST00000475302 CLEC4GQ6UXB4 293 aa11.86□□□□□ -0.51
ITGA6-210ENST00000475302 FAM196AQ6ZSG2 479 aa11.86□□□□□ -0.51
ITGA6-210ENST00000475302 AMIGO3Q86WK7 504 aa11.86□□□□□ -0.51
ITGA6-210ENST00000475302 TTLL11Q8NHH1 800 aa11.86□□□□□ -0.51
ITGA6-210ENST00000475302 KCTD12Q96CX2 325 aaKnown RBP11.86□□□□□ -0.51
ITGA6-210ENST00000475302 AK7Q96M32 723 aa11.86□□□□□ -0.51
ITGA6-210ENST00000475302 RGS17Q9UGC6 210 aaPredicted RBP11.86□□□□□ -0.51
ITGA6-210ENST00000475302 TSKSQ9UJT2 592 aa11.86□□□□□ -0.51
ITGA6-210ENST00000475302 SCN7AQ01118 1682 aa11.85□□□□□ -0.51
ITGA6-210ENST00000475302 RTL5Q5HYW3 569 aaPredicted RBP11.85□□□□□ -0.51
ITGA6-210ENST00000475302 KRT27Q7Z3Y8 459 aa11.85□□□□□ -0.51
ITGA6-210ENST00000475302 CLASRPQ8N2M8 674 aaKnown RBP11.85□□□□□ -0.51
ITGA6-210ENST00000475302 GPR108Q9NPR9 543 aa11.85□□□□□ -0.51
ITGA6-210ENST00000475302 LRRC4BQ9NT99 713 aa11.85□□□□□ -0.51
ITGA6-210ENST00000475302 ECHDC1Q9NTX5 307 aa11.85□□□□□ -0.51
ITGA6-210ENST00000475302 C4BP0C0L5 1744 aa11.84□□□□□ -0.51
ITGA6-210ENST00000475302 EYA2O00167 538 aa11.84□□□□□ -0.51
ITGA6-210ENST00000475302 NTSR2O95665 410 aa11.84□□□□□ -0.51
ITGA6-210ENST00000475302 TFCP2Q12800 502 aa11.84□□□□□ -0.51
ITGA6-210ENST00000475302 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
ITGA6-210ENST00000475302 KIF2CQ99661 725 aa11.84□□□□□ -0.51
ITGA6-210ENST00000475302 C22orf23Q9BZE7 217 aa11.84□□□□□ -0.51
ITGA6-210ENST00000475302 NBPF3Q9H094 633 aa11.84□□□□□ -0.51
ITGA6-210ENST00000475302 SIL1Q9H173 461 aa11.84□□□□□ -0.51
ITGA6-210ENST00000475302 NPDC1Q9NQX5 325 aaPredicted RBP11.84□□□□□ -0.51
ITGA6-210ENST00000475302 FAM198AQ9UFP1 575 aa11.84□□□□□ -0.51
ITGA6-210ENST00000475302 NARFQ9UHQ1 456 aa11.84□□□□□ -0.51
ITGA6-210ENST00000475302 CCNL1Q9UK58 526 aaPredicted RBP11.84□□□□□ -0.51
ITGA6-210ENST00000475302 DDX60Q8IY21 1712 aaKnown RBP11.83□□□□□ -0.52
ITGA6-210ENST00000475302 LRP5O75197 1615 aa11.83□□□□□ -0.52
ITGA6-210ENST00000475302 TESPA1A2RU30 521 aaPredicted RBP11.83□□□□□ -0.52
ITGA6-210ENST00000475302 IRS4O14654 1257 aaPredicted RBP11.83□□□□□ -0.52
ITGA6-210ENST00000475302 CHMLP26374 656 aa11.83□□□□□ -0.52
ITGA6-210ENST00000475302 IL15P40933 162 aaPredicted RBP11.83□□□□□ -0.52
ITGA6-210ENST00000475302 OS9Q13438 667 aaPredicted RBP11.83□□□□□ -0.52
ITGA6-210ENST00000475302 PARP10Q53GL7 1025 aa11.83□□□□□ -0.52
ITGA6-210ENST00000475302 TNNI3KQ59H18 835 aa11.83□□□□□ -0.52
ITGA6-210ENST00000475302 SMIM5Q71RC9 77 aa11.83□□□□□ -0.52
ITGA6-210ENST00000475302 AACSQ86V21 672 aa11.83□□□□□ -0.52
ITGA6-210ENST00000475302 ZNF594Q96JF6 807 aaPredicted RBP11.83□□□□□ -0.52
ITGA6-210ENST00000475302 PUS3Q9BZE2 481 aaKnown RBP11.83□□□□□ -0.52
ITGA6-210ENST00000475302 TLR7Q9NYK1 1049 aaKnown RBP11.83□□□□□ -0.52
ITGA6-210ENST00000475302 TRMT112Q9UI30 125 aaKnown RBP11.83□□□□□ -0.52
ITGA6-210ENST00000475302 DBNLQ9UJU6 430 aaKnown RBP11.83□□□□□ -0.52
ITGA6-210ENST00000475302 FPGT-TNNI3KV9GXZ4 949 aa11.83□□□□□ -0.52
ITGA6-210ENST00000475302 COL24A1Q17RW2 1714 aa11.83□□□□□ -0.52
ITGA6-210ENST00000475302 LAMB2P55268 1798 aa11.82□□□□□ -0.52
ITGA6-210ENST00000475302 RTL9Q8NET4 1388 aa11.82□□□□□ -0.52
ITGA6-210ENST00000475302 PDE8AO60658 829 aa11.82□□□□□ -0.52
ITGA6-210ENST00000475302 GLRX3O76003 335 aaKnown RBP11.82□□□□□ -0.52
ITGA6-210ENST00000475302 MFAP1P55081 439 aaKnown RBP11.82□□□□□ -0.52
ITGA6-210ENST00000475302 CTSWP56202 376 aa11.82□□□□□ -0.52
ITGA6-210ENST00000475302 PRSS12P56730 875 aa11.82□□□□□ -0.52
ITGA6-210ENST00000475302 LRRC24Q50LG9 513 aa11.82□□□□□ -0.52
ITGA6-210ENST00000475302 SLC10A5Q5PT55 438 aa11.82□□□□□ -0.52
ITGA6-210ENST00000475302 UTP14AQ9BVJ6 771 aaKnown RBP11.82□□□□□ -0.52
ITGA6-210ENST00000475302 USP26Q9BXU7 913 aa11.82□□□□□ -0.52
ITGA6-210ENST00000475302 CCDC8Q9H0W5 538 aaPredicted RBP11.82□□□□□ -0.52
ITGA6-210ENST00000475302 SEPT9Q9UHD8 586 aaPredicted RBP11.82□□□□□ -0.52
ITGA6-210ENST00000475302 RIPOR2Q9Y4F9 1068 aa11.82□□□□□ -0.52
ITGA6-210ENST00000475302 SH3TC1Q8TE82 1336 aa11.82□□□□□ -0.52
ITGA6-210ENST00000475302 C3orf80F5H4A9 247 aa11.81□□□□□ -0.52
ITGA6-210ENST00000475302 IFIT2P09913 472 aaKnown RBP11.81□□□□□ -0.52
ITGA6-210ENST00000475302 IL17RAQ96F46 866 aa11.81□□□□□ -0.52
ITGA6-210ENST00000475302 ARXQ96QS3 562 aa11.81□□□□□ -0.52
ITGA6-210ENST00000475302 GREM2Q9H772 168 aa11.81□□□□□ -0.52
ITGA6-210ENST00000475302 MYH3P11055 1940 aa11.81□□□□□ -0.52
ITGA6-210ENST00000475302 C4AP0C0L4 1744 aa11.8□□□□□ -0.52
ITGA6-210ENST00000475302 RIC1Q4ADV7 1423 aa11.8□□□□□ -0.52
ITGA6-210ENST00000475302 ATP5JP18859 108 aa11.8□□□□□ -0.52
ITGA6-210ENST00000475302 SLC27A3Q5K4L6 730 aa11.8□□□□□ -0.52
ITGA6-210ENST00000475302 VGLL2Q8N8G2 317 aa11.8□□□□□ -0.52
ITGA6-210ENST00000475302 ESYT1Q9BSJ8 1104 aa11.8□□□□□ -0.52
ITGA6-210ENST00000475302 BCL11AQ9H165 835 aa11.8□□□□□ -0.52
ITGA6-210ENST00000475302 IL25Q9H293 177 aa11.8□□□□□ -0.52
ITGA6-210ENST00000475302 NIP7Q9Y221 180 aaKnown RBP eCLIP11.8□□□□□ -0.52
ITGA6-210ENST00000475302 ZNF609O15014 1411 aa11.79□□□□□ -0.52
ITGA6-210ENST00000475302 UBR3Q6ZT12 1888 aa11.79□□□□□ -0.52
ITGA6-210ENST00000475302 COL4A1P02462 1669 aa11.79□□□□□ -0.52
ITGA6-210ENST00000475302 GNPATO15228 680 aa11.79□□□□□ -0.52
ITGA6-210ENST00000475302 EIF5BO60841 1220 aaKnown RBP11.79□□□□□ -0.52
ITGA6-210ENST00000475302 ITGA6P23229 1130 aa11.79□□□□□ -0.52
ITGA6-210ENST00000475302 IFIT5Q13325 482 aaKnown RBP11.79□□□□□ -0.52
ITGA6-210ENST00000475302 CCDC57Q2TAC2 916 aa11.79□□□□□ -0.52
ITGA6-210ENST00000475302 USPL1Q5W0Q7 1092 aa11.79□□□□□ -0.52
ITGA6-210ENST00000475302 TBC1D9BQ66K14 1250 aa11.79□□□□□ -0.52
ITGA6-210ENST00000475302 DDRGK1Q96HY6 314 aa11.79□□□□□ -0.52
ITGA6-210ENST00000475302 DBNDD2Q9BQY9 259 aa11.79□□□□□ -0.52
ITGA6-210ENST00000475302 UPF2Q9HAU5 1272 aaKnown RBP11.79□□□□□ -0.52
ITGA6-210ENST00000475302 SNRKQ9NRH2 765 aa11.79□□□□□ -0.52
ITGA6-210ENST00000475302 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
ITGA6-210ENST00000475302 ZNF652Q9Y2D9 606 aa11.79□□□□□ -0.52
ITGA6-210ENST00000475302 RTCBQ9Y3I0 505 aaKnown RBP11.79□□□□□ -0.52
ITGA6-210ENST00000475302 GOLGA8CPA6NN73 597 aa11.78□□□□□ -0.52
ITGA6-210ENST00000475302 ERC2O15083 957 aa11.78□□□□□ -0.52
ITGA6-210ENST00000475302 PLSCR1O15162 318 aa11.78□□□□□ -0.52
ITGA6-210ENST00000475302 EPB41L2O43491 1005 aaKnown RBP11.78□□□□□ -0.52
ITGA6-210ENST00000475302 TRIM37O94972 964 aa11.78□□□□□ -0.52
ITGA6-210ENST00000475302 HCLS1P14317 486 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms