RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 MXD3Q9BW11 206 aa15.01□□□□□ -0.01
CLIP2-204ENST00000474962 SCN9AQ15858 1988 aa15□□□□□ -0.01
CLIP2-204ENST00000474962 USP17L3A6NCW0 530 aa15□□□□□ -0.01
CLIP2-204ENST00000474962 USP17L4A6NCW7 530 aa15□□□□□ -0.01
CLIP2-204ENST00000474962 ECE1P42892 770 aa15□□□□□ -0.01
CLIP2-204ENST00000474962 CTCFP49711 727 aaPredicted RBP15□□□□□ -0.01
CLIP2-204ENST00000474962 LBX1P52954 281 aa15□□□□□ -0.01
CLIP2-204ENST00000474962 FOXO4P98177 505 aa15□□□□□ -0.01
CLIP2-204ENST00000474962 MAP2K1Q02750 393 aaPredicted RBP15□□□□□ -0.01
CLIP2-204ENST00000474962 KIF4BQ2VIQ3 1234 aa15□□□□□ -0.01
CLIP2-204ENST00000474962 USP17L1Q7RTZ2 530 aa15□□□□□ -0.01
CLIP2-204ENST00000474962 DCPSQ96C86 337 aaKnown RBP15□□□□□ -0.01
CLIP2-204ENST00000474962 ADM5C9JUS6 153 aa14.99□□□□□ -0.01
CLIP2-204ENST00000474962 SNAP23O00161 211 aa14.99□□□□□ -0.01
CLIP2-204ENST00000474962 ZNF280AP59817 542 aaPredicted RBP14.99□□□□□ -0.01
CLIP2-204ENST00000474962 SCARF1Q14162 830 aa14.99□□□□□ -0.01
CLIP2-204ENST00000474962 EPHA10Q5JZY3 1008 aa14.99□□□□□ -0.01
CLIP2-204ENST00000474962 AGBL3Q8NEM8 1001 aa14.99□□□□□ -0.01
CLIP2-204ENST00000474962 MPHOSPH8Q99549 860 aa14.99□□□□□ -0.01
CLIP2-204ENST00000474962 POLR2AP24928 1970 aaKnown RBP14.98□□□□□ -0.01
CLIP2-204ENST00000474962 USP17L8P0C7I0 530 aa14.98□□□□□ -0.01
CLIP2-204ENST00000474962 KLRK1P26718 216 aa14.98□□□□□ -0.01
CLIP2-204ENST00000474962 HELBQ8NG08 1087 aaPredicted RBP14.98□□□□□ -0.01
CLIP2-204ENST00000474962 PRDM10Q9NQV6 1147 aa14.98□□□□□ -0.01
CLIP2-204ENST00000474962 LEMD3Q9Y2U8 911 aa14.98□□□□□ -0.01
CLIP2-204ENST00000474962 ZNF804BA4D1E1 1349 aa14.97□□□□□ -0.01
CLIP2-204ENST00000474962 ANKRD18BA2A2Z9 1011 aa14.97□□□□□ -0.01
CLIP2-204ENST00000474962 TAF5LO75529 589 aa14.97□□□□□ -0.01
CLIP2-204ENST00000474962 MYCNP04198 464 aaPredicted RBP14.97□□□□□ -0.01
CLIP2-204ENST00000474962 CHRNDQ07001 517 aa14.97□□□□□ -0.01
CLIP2-204ENST00000474962 DACT2Q5SW24 774 aa14.97□□□□□ -0.01
CLIP2-204ENST00000474962 SLC4A10Q6U841 1118 aa14.97□□□□□ -0.01
CLIP2-204ENST00000474962 LMBR1LQ6UX01 489 aa14.97□□□□□ -0.01
CLIP2-204ENST00000474962 FBXW7Q969H0 707 aa14.97□□□□□ -0.01
CLIP2-204ENST00000474962 ANKRD2Q9GZV1 360 aa14.97□□□□□ -0.01
CLIP2-204ENST00000474962 MYOZ2Q9NPC6 264 aa14.97□□□□□ -0.01
CLIP2-204ENST00000474962 SCAF8Q9UPN6 1271 aaKnown RBP14.97□□□□□ -0.01
CLIP2-204ENST00000474962 CHMP3Q9Y3E7 222 aa14.97□□□□□ -0.01
CLIP2-204ENST00000474962 TRPM7Q96QT4 1865 aa14.97□□□□□ -0.01
CLIP2-204ENST00000474962 GRM8O00222 908 aa14.96□□□□□ -0.01
CLIP2-204ENST00000474962 HSPA8P11142 646 aaKnown RBP14.96□□□□□ -0.01
CLIP2-204ENST00000474962 MAP2K2P36507 400 aa14.96□□□□□ -0.01
CLIP2-204ENST00000474962 HUNKP57058 714 aa14.96□□□□□ -0.01
CLIP2-204ENST00000474962 IFIT5Q13325 482 aaKnown RBP14.96□□□□□ -0.01
CLIP2-204ENST00000474962 ALDH1L2Q3SY69 923 aa14.96□□□□□ -0.01
CLIP2-204ENST00000474962 ANGEL2Q5VTE6 544 aaKnown RBP14.96□□□□□ -0.01
CLIP2-204ENST00000474962 ZNF594Q96JF6 807 aaPredicted RBP14.96□□□□□ -0.01
CLIP2-204ENST00000474962 HHIPL1Q96JK4 782 aa14.96□□□□□ -0.01
CLIP2-204ENST00000474962 ZIC5Q96T25 663 aa14.96□□□□□ -0.01
CLIP2-204ENST00000474962 COA1Q9GZY4 146 aa14.96□□□□□ -0.01
CLIP2-204ENST00000474962 SMC4Q9NTJ3 1288 aa14.96□□□□□ -0.01
CLIP2-204ENST00000474962 GGA3Q9NZ52 723 aa14.96□□□□□ -0.01
CLIP2-204ENST00000474962 C9orf78Q9NZ63 289 aaPredicted RBP14.96□□□□□ -0.01
CLIP2-204ENST00000474962 MED23Q9ULK4 1368 aa14.96□□□□□ -0.02
CLIP2-204ENST00000474962 CACNA1FO60840 1977 aa14.95□□□□□ -0.02
CLIP2-204ENST00000474962 TTLL5Q6EMB2 1281 aa14.95□□□□□ -0.02
CLIP2-204ENST00000474962 SULF1Q8IWU6 871 aa14.95□□□□□ -0.02
CLIP2-204ENST00000474962 GBA2Q9HCG7 927 aaPredicted RBP14.95□□□□□ -0.02
CLIP2-204ENST00000474962 KCNJ4P48050 445 aa14.94□□□□□ -0.02
CLIP2-204ENST00000474962 NBPF9Q3BBW0 867 aa14.94□□□□□ -0.02
CLIP2-204ENST00000474962 STRIP1Q5VSL9 837 aa14.94□□□□□ -0.02
CLIP2-204ENST00000474962 MRPL50Q8N5N7 158 aaKnown RBP14.94□□□□□ -0.02
CLIP2-204ENST00000474962 C2orf69Q8N8R5 385 aa14.94□□□□□ -0.02
CLIP2-204ENST00000474962 SSH1Q8WYL5 1049 aa14.94□□□□□ -0.02
CLIP2-204ENST00000474962 BEGAINQ9BUH8 593 aa14.94□□□□□ -0.02
CLIP2-204ENST00000474962 TSKSQ9UJT2 592 aa14.94□□□□□ -0.02
CLIP2-204ENST00000474962 MYH3P11055 1940 aa14.94□□□□□ -0.02
CLIP2-204ENST00000474962 PLIN1O60240 522 aa14.93□□□□□ -0.02
CLIP2-204ENST00000474962 ALDH1L1O75891 902 aa14.93□□□□□ -0.02
CLIP2-204ENST00000474962 NBPF7P0C2Y1 421 aaPredicted RBP14.93□□□□□ -0.02
CLIP2-204ENST00000474962 GTF2IP78347 998 aa14.93□□□□□ -0.02
CLIP2-204ENST00000474962 CCDC57Q2TAC2 916 aa14.93□□□□□ -0.02
CLIP2-204ENST00000474962 PRAMEF18Q5VWM3 479 aa14.93□□□□□ -0.02
CLIP2-204ENST00000474962 CDCA5Q96FF9 252 aa14.93□□□□□ -0.02
CLIP2-204ENST00000474962 KAZALD1Q96I82 304 aa14.93□□□□□ -0.02
CLIP2-204ENST00000474962 SRCIN1Q9C0H9 1055 aa14.93□□□□□ -0.02
CLIP2-204ENST00000474962 CD209Q9NNX6 404 aa14.93□□□□□ -0.02
CLIP2-204ENST00000474962 RARSP54136 660 aaKnown RBP14.92□□□□□ -0.02
CLIP2-204ENST00000474962 LDHAL6AQ6ZMR3 332 aa14.92□□□□□ -0.02
CLIP2-204ENST00000474962 OGFOD1Q8N543 542 aa14.92□□□□□ -0.02
CLIP2-204ENST00000474962 SPEF2Q9C093 1822 aa14.92□□□□□ -0.02
CLIP2-204ENST00000474962 IRS2Q9Y4H2 1338 aa14.92□□□□□ -0.02
CLIP2-204ENST00000474962 FAM155AB1AL88 458 aaPredicted RBP14.91□□□□□ -0.02
CLIP2-204ENST00000474962 RGMBQ6NW40 437 aa14.91□□□□□ -0.02
CLIP2-204ENST00000474962 KIAA0825Q8IV33 1275 aa14.91□□□□□ -0.02
CLIP2-204ENST00000474962 SUCLG2Q96I99 432 aa14.91□□□□□ -0.02
CLIP2-204ENST00000474962 ZNF609O15014 1411 aa14.91□□□□□ -0.02
CLIP2-204ENST00000474962 WNT10BO00744 389 aa14.9□□□□□ -0.02
CLIP2-204ENST00000474962 IPO8O15397 1037 aaKnown RBP14.9□□□□□ -0.02
CLIP2-204ENST00000474962 ZNF157P51786 506 aaPredicted RBP14.9□□□□□ -0.02
CLIP2-204ENST00000474962 TAF7LQ5H9L4 462 aa14.9□□□□□ -0.02
CLIP2-204ENST00000474962 PUS3Q9BZE2 481 aaKnown RBP14.9□□□□□ -0.02
CLIP2-204ENST00000474962 CNNM1Q9NRU3 951 aa14.9□□□□□ -0.02
CLIP2-204ENST00000474962 KIF16BQ96L93 1317 aa14.9□□□□□ -0.02
CLIP2-204ENST00000474962 BRPF1P55201 1214 aaPredicted RBP14.89□□□□□ -0.03
CLIP2-204ENST00000474962 NOGQ13253 232 aa14.89□□□□□ -0.03
CLIP2-204ENST00000474962 C15orf52Q6ZUT6 534 aaKnown RBP14.89□□□□□ -0.03
CLIP2-204ENST00000474962 MOB2Q70IA6 237 aa14.89□□□□□ -0.03
CLIP2-204ENST00000474962 CERS5Q8N5B7 392 aa14.89□□□□□ -0.03
CLIP2-204ENST00000474962 FRAT1Q92837 279 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms