RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 MOB2Q70IA6 237 aa18■□□□□ 0.47
CCDC78-209ENST00000474647 GMLQ99445 158 aa18■□□□□ 0.47
CCDC78-209ENST00000474647 GREM2Q9H772 168 aa18■□□□□ 0.47
CCDC78-209ENST00000474647 LAMB1P07942 1786 aa17.99■□□□□ 0.47
CCDC78-209ENST00000474647 PI4KAP2A4QPH2 592 aa17.99■□□□□ 0.47
CCDC78-209ENST00000474647 FKBP1BP68106 108 aa17.99■□□□□ 0.47
CCDC78-209ENST00000474647 NEXNQ0ZGT2 675 aa17.99■□□□□ 0.47
CCDC78-209ENST00000474647 PRAMEF18Q5VWM3 479 aa17.99■□□□□ 0.47
CCDC78-209ENST00000474647 TSPYL6Q8N831 410 aa17.99■□□□□ 0.47
CCDC78-209ENST00000474647 PI4KAP1Q8N8J0 262 aa17.99■□□□□ 0.47
CCDC78-209ENST00000474647 MXD3Q9BW11 206 aa17.99■□□□□ 0.47
CCDC78-209ENST00000474647 CHMP4AQ9BY43 222 aa17.99■□□□□ 0.47
CCDC78-209ENST00000474647 IGKV5-2P06315 115 aa17.98■□□□□ 0.47
CCDC78-209ENST00000474647 CCT4P50991 539 aaKnown RBP17.98■□□□□ 0.47
CCDC78-209ENST00000474647 CWF19L2Q2TBE0 894 aaKnown RBP17.98■□□□□ 0.47
CCDC78-209ENST00000474647 NBPF9Q3BBW0 867 aa17.98■□□□□ 0.47
CCDC78-209ENST00000474647 KSR2Q6VAB6 950 aa17.98■□□□□ 0.47
CCDC78-209ENST00000474647 REM2Q8IYK8 340 aaPredicted RBP17.98■□□□□ 0.47
CCDC78-209ENST00000474647 TTLL11Q8NHH1 800 aa17.98■□□□□ 0.47
CCDC78-209ENST00000474647 TSR2Q969E8 191 aaKnown RBP17.98■□□□□ 0.47
CCDC78-209ENST00000474647 STK31Q9BXU1 1019 aa17.98■□□□□ 0.47
CCDC78-209ENST00000474647 MINPP1Q9UNW1 487 aa17.98■□□□□ 0.47
CCDC78-209ENST00000474647 UBE2Q2LH0YL09 131 aa17.97■□□□□ 0.47
CCDC78-209ENST00000474647 CTU1Q7Z7A3 348 aaKnown RBP17.97■□□□□ 0.47
CCDC78-209ENST00000474647 OGFOD1Q8N543 542 aa17.97■□□□□ 0.47
CCDC78-209ENST00000474647 BSDC1Q9NW68 430 aaPredicted RBP17.97■□□□□ 0.47
CCDC78-209ENST00000474647 SASH1O94885 1247 aa17.96■□□□□ 0.47
CCDC78-209ENST00000474647 MKRN3Q13064 507 aaKnown RBP17.96■□□□□ 0.47
CCDC78-209ENST00000474647 DACT2Q5SW24 774 aa17.96■□□□□ 0.47
CCDC78-209ENST00000474647 UBE3BQ7Z3V4 1068 aa17.96■□□□□ 0.47
CCDC78-209ENST00000474647 MYO3BQ8WXR4 1341 aa17.96■□□□□ 0.46
CCDC78-209ENST00000474647 NEURL1BA8MQ27 555 aa17.95■□□□□ 0.46
CCDC78-209ENST00000474647 NF2P35240 595 aa17.95■□□□□ 0.46
CCDC78-209ENST00000474647 IGHMBP2P38935 993 aaKnown RBP17.95■□□□□ 0.46
CCDC78-209ENST00000474647 OTOFQ9HC10 1997 aa17.95■□□□□ 0.46
CCDC78-209ENST00000474647 WNT10BO00744 389 aa17.94■□□□□ 0.46
CCDC78-209ENST00000474647 COA1Q9GZY4 146 aa17.94■□□□□ 0.46
CCDC78-209ENST00000474647 HDAC9Q9UKV0 1011 aa17.94■□□□□ 0.46
CCDC78-209ENST00000474647 ARAP2Q8WZ64 1704 aa17.94■□□□□ 0.46
CCDC78-209ENST00000474647 TBC1D8O95759 1140 aa17.93■□□□□ 0.46
CCDC78-209ENST00000474647 PRKG1Q13976 671 aa17.93■□□□□ 0.46
CCDC78-209ENST00000474647 TWISTNBQ3B726 338 aaPredicted RBP17.93■□□□□ 0.46
CCDC78-209ENST00000474647 STRIP1Q5VSL9 837 aa17.93■□□□□ 0.46
CCDC78-209ENST00000474647 G2E3Q7L622 706 aa17.93■□□□□ 0.46
CCDC78-209ENST00000474647 TXNRD3Q86VQ6 643 aa17.93■□□□□ 0.46
CCDC78-209ENST00000474647 ITGA6P23229 1130 aa17.92■□□□□ 0.46
CCDC78-209ENST00000474647 KLRK1P26718 216 aa17.92■□□□□ 0.46
CCDC78-209ENST00000474647 KCNJ4P48050 445 aa17.92■□□□□ 0.46
CCDC78-209ENST00000474647 KIAA0825Q8IV33 1275 aa17.92■□□□□ 0.46
CCDC78-209ENST00000474647 MPHOSPH8Q99549 860 aa17.92■□□□□ 0.46
CCDC78-209ENST00000474647 LEMD3Q9Y2U8 911 aa17.92■□□□□ 0.46
CCDC78-209ENST00000474647 ZNF804BA4D1E1 1349 aa17.92■□□□□ 0.46
CCDC78-209ENST00000474647 TTLL5Q6EMB2 1281 aa17.91■□□□□ 0.46
CCDC78-209ENST00000474647 ZNF296Q8WUU4 475 aaPredicted RBP17.91■□□□□ 0.46
CCDC78-209ENST00000474647 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.91■□□□□ 0.46
CCDC78-209ENST00000474647 HPS5Q9UPZ3 1129 aa17.91■□□□□ 0.46
CCDC78-209ENST00000474647 CENPFP49454 3210 aa17.91■□□□□ 0.46
CCDC78-209ENST00000474647 H7C1W4 665 aa17.9■□□□□ 0.46
CCDC78-209ENST00000474647 SLC4A2P04920 1241 aa17.9■□□□□ 0.46
CCDC78-209ENST00000474647 GTF2IP78347 998 aa17.9■□□□□ 0.46
CCDC78-209ENST00000474647 APOBEC3FQ8IUX4 373 aaKnown RBP17.9■□□□□ 0.46
CCDC78-209ENST00000474647 ANKRD2Q9GZV1 360 aa17.9■□□□□ 0.46
CCDC78-209ENST00000474647 SREBF2Q12772 1141 aa17.89■□□□□ 0.45
CCDC78-209ENST00000474647 FKBP5Q13451 457 aaPredicted RBP17.89■□□□□ 0.45
CCDC78-209ENST00000474647 GCKRQ14397 625 aa17.89■□□□□ 0.45
CCDC78-209ENST00000474647 ARMC9Q7Z3E5 817 aa17.89■□□□□ 0.45
CCDC78-209ENST00000474647 MYH16Q9H6N6 1097 aa17.89■□□□□ 0.45
CCDC78-209ENST00000474647 MYH13Q9UKX3 1938 aa17.89■□□□□ 0.45
CCDC78-209ENST00000474647 COL1A1P02452 1464 aaPredicted RBP17.88■□□□□ 0.45
CCDC78-209ENST00000474647 PTPN12Q05209 780 aaKnown RBP17.88■□□□□ 0.45
CCDC78-209ENST00000474647 CHRNDQ07001 517 aa17.88■□□□□ 0.45
CCDC78-209ENST00000474647 FLIIQ13045 1269 aa17.88■□□□□ 0.45
CCDC78-209ENST00000474647 ANGEL1Q9UNK9 670 aaKnown RBP17.88■□□□□ 0.45
CCDC78-209ENST00000474647 FZD1Q9UP38 647 aa17.88■□□□□ 0.45
CCDC78-209ENST00000474647 HTTP42858 3142 aa17.88■□□□□ 0.45
CCDC78-209ENST00000474647 RBBP6Q7Z6E9 1792 aaKnown RBP17.87■□□□□ 0.45
CCDC78-209ENST00000474647 TM4SF4P48230 202 aa17.87■□□□□ 0.45
CCDC78-209ENST00000474647 PKN2Q16513 984 aaKnown RBP17.87■□□□□ 0.45
CCDC78-209ENST00000474647 PLA2G12BQ9BX93 195 aa17.87■□□□□ 0.45
CCDC78-209ENST00000474647 CHMP3Q9Y3E7 222 aa17.87■□□□□ 0.45
CCDC78-209ENST00000474647 ANKRD18BA2A2Z9 1011 aa17.86■□□□□ 0.45
CCDC78-209ENST00000474647 GPR25O00155 361 aa17.86■□□□□ 0.45
CCDC78-209ENST00000474647 MMP14P50281 582 aa17.86■□□□□ 0.45
CCDC78-209ENST00000474647 WWC1Q8IX03 1113 aa17.86■□□□□ 0.45
CCDC78-209ENST00000474647 DNAAF4Q8WXU2 420 aa17.86■□□□□ 0.45
CCDC78-209ENST00000474647 F8W031 263 aaPredicted RBP17.85■□□□□ 0.45
CCDC78-209ENST00000474647 SNAP23O00161 211 aa17.85■□□□□ 0.45
CCDC78-209ENST00000474647 TAF5LO75529 589 aa17.85■□□□□ 0.45
CCDC78-209ENST00000474647 CASP7P55210 303 aa17.85■□□□□ 0.45
CCDC78-209ENST00000474647 DLGAP5Q15398 846 aa17.85■□□□□ 0.45
CCDC78-209ENST00000474647 CCDC184Q52MB2 194 aa17.85■□□□□ 0.45
CCDC78-209ENST00000474647 CD209Q9NNX6 404 aa17.85■□□□□ 0.45
CCDC78-209ENST00000474647 SSC5DA1L4H1 1573 aa17.84■□□□□ 0.45
CCDC78-209ENST00000474647 CCDC27Q2M243 656 aa17.84■□□□□ 0.45
CCDC78-209ENST00000474647 HELBQ8NG08 1087 aaPredicted RBP17.84■□□□□ 0.45
CCDC78-209ENST00000474647 LINS1Q8NG48 757 aa17.84■□□□□ 0.45
CCDC78-209ENST00000474647 FANCIQ9NVI1 1328 aa17.83■□□□□ 0.44
CCDC78-209ENST00000474647 FKTNO75072 461 aa17.83■□□□□ 0.44
CCDC78-209ENST00000474647 CSF1RP07333 972 aa17.83■□□□□ 0.44
CCDC78-209ENST00000474647 SPRYD7Q5W111 196 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms