RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 ZNF622Q969S3 477 aaKnown RBP eCLIP25.12■■□□□ 1.61
SMIM11A-204ENST00000474455 CRAMP1Q96RY5 1269 aa25.12■■□□□ 1.61
SMIM11A-204ENST00000474455 ECHDC1Q9NTX5 307 aa25.12■■□□□ 1.61
SMIM11A-204ENST00000474455 AKAP2Q9Y2D5 859 aa25.12■■□□□ 1.61
SMIM11A-204ENST00000474455 NPR1P16066 1061 aa25.11■■□□□ 1.61
SMIM11A-204ENST00000474455 OLFM4Q6UX06 510 aa25.11■■□□□ 1.61
SMIM11A-204ENST00000474455 SGIP1Q9BQI5 828 aa25.11■■□□□ 1.61
SMIM11A-204ENST00000474455 GZF1Q9H116 711 aaPredicted RBP25.11■■□□□ 1.61
SMIM11A-204ENST00000474455 GRPEL1Q9HAV7 217 aa25.11■■□□□ 1.61
SMIM11A-204ENST00000474455 NDUFB9Q9Y6M9 179 aa25.11■■□□□ 1.61
SMIM11A-204ENST00000474455 C10orf71Q711Q0 1435 aa25.11■■□□□ 1.61
SMIM11A-204ENST00000474455 UTRNP46939 3433 aa25.11■■□□□ 1.61
SMIM11A-204ENST00000474455 MASTLQ96GX5 879 aa25.11■■□□□ 1.61
SMIM11A-204ENST00000474455 TTC41PQ6P2S7 1318 aa25.1■■□□□ 1.61
SMIM11A-204ENST00000474455 PUM3Q15397 648 aaKnown RBP25.1■■□□□ 1.61
SMIM11A-204ENST00000474455 BOLA2Q9H3K6 86 aa25.1■■□□□ 1.61
SMIM11A-204ENST00000474455 ARAP2Q8WZ64 1704 aa25.1■■□□□ 1.61
SMIM11A-204ENST00000474455 H0YIN7 160 aa25.09■■□□□ 1.61
SMIM11A-204ENST00000474455 SDSP20132 328 aa25.09■■□□□ 1.61
SMIM11A-204ENST00000474455 PTGER2P43116 358 aa25.09■■□□□ 1.61
SMIM11A-204ENST00000474455 TNPO1Q92973 898 aaKnown RBP25.09■■□□□ 1.61
SMIM11A-204ENST00000474455 AKAP11Q9UKA4 1901 aa25.09■■□□□ 1.61
SMIM11A-204ENST00000474455 POLD1P28340 1107 aa25.08■■□□□ 1.61
SMIM11A-204ENST00000474455 LPIN2Q92539 896 aa25.08■■□□□ 1.61
SMIM11A-204ENST00000474455 A0A0G2JLW4 131 aa25.07■■□□□ 1.6
SMIM11A-204ENST00000474455 BBOX1O75936 387 aa25.07■■□□□ 1.6
SMIM11A-204ENST00000474455 KLRK1P26718 216 aa25.07■■□□□ 1.6
SMIM11A-204ENST00000474455 KIF2CQ99661 725 aa25.07■■□□□ 1.6
SMIM11A-204ENST00000474455 AOX1Q06278 1338 aa25.07■■□□□ 1.6
SMIM11A-204ENST00000474455 DLEC1Q9Y238 1755 aa25.07■■□□□ 1.6
SMIM11A-204ENST00000474455 PPEF1O14829 653 aaPredicted RBP25.06■■□□□ 1.6
SMIM11A-204ENST00000474455 GPSM2P81274 684 aa25.06■■□□□ 1.6
SMIM11A-204ENST00000474455 EDC3Q96F86 508 aaKnown RBP25.06■■□□□ 1.6
SMIM11A-204ENST00000474455 MYO5AQ9Y4I1 1855 aaKnown RBP25.06■■□□□ 1.6
SMIM11A-204ENST00000474455 KIAA1551Q9HCM1 1747 aa25.06■■□□□ 1.6
SMIM11A-204ENST00000474455 TRIM6-TRIM34B2RNG4 842 aa25.06■■□□□ 1.6
SMIM11A-204ENST00000474455 K7ELQ4 463 aaPredicted RBP25.06■■□□□ 1.6
SMIM11A-204ENST00000474455 RILPL2Q969X0 211 aa25.06■■□□□ 1.6
SMIM11A-204ENST00000474455 GPATCH3Q96I76 525 aa25.06■■□□□ 1.6
SMIM11A-204ENST00000474455 GPR101Q96P66 508 aaPredicted RBP25.06■■□□□ 1.6
SMIM11A-204ENST00000474455 PANK2Q9BZ23 570 aa25.06■■□□□ 1.6
SMIM11A-204ENST00000474455 LRRC37AA6NMS7 1700 aa25.06■■□□□ 1.6
SMIM11A-204ENST00000474455 GLRX3O76003 335 aaKnown RBP25.05■■□□□ 1.6
SMIM11A-204ENST00000474455 CLEC17AQ6ZS10 378 aa25.05■■□□□ 1.6
SMIM11A-204ENST00000474455 UBE2Q2Q8WVN8 375 aa25.05■■□□□ 1.6
SMIM11A-204ENST00000474455 ANKIB1Q9P2G1 1089 aa25.05■■□□□ 1.6
SMIM11A-204ENST00000474455 ZNF219Q9P2Y4 722 aaPredicted RBP25.05■■□□□ 1.6
SMIM11A-204ENST00000474455 PPP1R1BQ9UD71 204 aaPredicted RBP25.05■■□□□ 1.6
SMIM11A-204ENST00000474455 CDC45O75419 566 aa25.04■■□□□ 1.6
SMIM11A-204ENST00000474455 ATP5JP18859 108 aa25.04■■□□□ 1.6
SMIM11A-204ENST00000474455 KCNA3P22001 575 aa25.04■■□□□ 1.6
SMIM11A-204ENST00000474455 ALDH1B1P30837 517 aa25.04■■□□□ 1.6
SMIM11A-204ENST00000474455 PHKA1P46020 1223 aa25.04■■□□□ 1.6
SMIM11A-204ENST00000474455 SCARF1Q14162 830 aa25.04■■□□□ 1.6
SMIM11A-204ENST00000474455 GORABQ5T7V8 394 aa25.04■■□□□ 1.6
SMIM11A-204ENST00000474455 WWC3Q9ULE0 1092 aa25.04■■□□□ 1.6
SMIM11A-204ENST00000474455 ERC2O15083 957 aa25.04■■□□□ 1.6
SMIM11A-204ENST00000474455 SLC5A1P13866 664 aa25.04■■□□□ 1.6
SMIM11A-204ENST00000474455 DPEP1P16444 411 aa25.04■■□□□ 1.6
SMIM11A-204ENST00000474455 BCAMP50895 628 aa25.04■■□□□ 1.6
SMIM11A-204ENST00000474455 NSFL1CQ9UNZ2 370 aaKnown RBP25.04■■□□□ 1.6
SMIM11A-204ENST00000474455 STYK1Q6J9G0 422 aa25.03■■□□□ 1.6
SMIM11A-204ENST00000474455 TBC1D9Q6ZT07 1266 aa25.03■■□□□ 1.6
SMIM11A-204ENST00000474455 TXNRD3Q86VQ6 643 aa25.03■■□□□ 1.6
SMIM11A-204ENST00000474455 ANKRD2Q9GZV1 360 aa25.03■■□□□ 1.6
SMIM11A-204ENST00000474455 GYG1P46976 350 aa25.02■■□□□ 1.6
SMIM11A-204ENST00000474455 UBE4AQ14139 1066 aa25.02■■□□□ 1.6
SMIM11A-204ENST00000474455 CCDC102BQ68D86 513 aa25.02■■□□□ 1.6
SMIM11A-204ENST00000474455 PRPF40BQ6NWY9 871 aaKnown RBP25.02■■□□□ 1.6
SMIM11A-204ENST00000474455 PI16Q6UXB8 463 aa25.02■■□□□ 1.6
SMIM11A-204ENST00000474455 KLHL34Q8N239 644 aa25.02■■□□□ 1.6
SMIM11A-204ENST00000474455 LTBP1Q14766 1721 aa25.02■■□□□ 1.6
SMIM11A-204ENST00000474455 IFIT1P09914 478 aaKnown RBP25.02■■□□□ 1.6
SMIM11A-204ENST00000474455 TTC39AQ5SRH9 613 aa25.02■■□□□ 1.6
SMIM11A-204ENST00000474455 SP8Q8IXZ3 490 aa25.02■■□□□ 1.6
SMIM11A-204ENST00000474455 SNRKQ9NRH2 765 aa25.02■■□□□ 1.6
SMIM11A-204ENST00000474455 ATP6V0A2Q9Y487 856 aa25.02■■□□□ 1.6
SMIM11A-204ENST00000474455 ZNF804BA4D1E1 1349 aa25.02■■□□□ 1.6
SMIM11A-204ENST00000474455 CCDC158Q5M9N0 1113 aa25.01■■□□□ 1.59
SMIM11A-204ENST00000474455 DNAJC2Q99543 621 aaKnown RBP25.01■■□□□ 1.59
SMIM11A-204ENST00000474455 HSP90AA1P07900 732 aaKnown RBP25■■□□□ 1.59
SMIM11A-204ENST00000474455 KCNJ4P48050 445 aa25■■□□□ 1.59
SMIM11A-204ENST00000474455 GOLGA6L22H0YM25 854 aa25■■□□□ 1.59
SMIM11A-204ENST00000474455 POLLQ9UGP5 575 aa25■■□□□ 1.59
SMIM11A-204ENST00000474455 IQSEC3Q9UPP2 1182 aaPredicted RBP25■■□□□ 1.59
SMIM11A-204ENST00000474455 XDHP47989 1333 aa25■■□□□ 1.59
SMIM11A-204ENST00000474455 MCAMP43121 646 aa24.99■■□□□ 1.59
SMIM11A-204ENST00000474455 FAM84BQ96KN1 310 aaPredicted RBP24.99■■□□□ 1.59
SMIM11A-204ENST00000474455 IRS2Q9Y4H2 1338 aa24.99■■□□□ 1.59
SMIM11A-204ENST00000474455 BRCA1P38398 1863 aaKnown RBP24.99■■□□□ 1.59
SMIM11A-204ENST00000474455 HAUS7Q99871 368 aa24.98■■□□□ 1.59
SMIM11A-204ENST00000474455 MYH13Q9UKX3 1938 aa24.98■■□□□ 1.59
SMIM11A-204ENST00000474455 CNKSR1Q969H4 720 aa24.98■■□□□ 1.59
SMIM11A-204ENST00000474455 FKBP4Q02790 459 aaKnown RBP eCLIP24.97■■□□□ 1.59
SMIM11A-204ENST00000474455 RABEP1Q15276 862 aa24.97■■□□□ 1.59
SMIM11A-204ENST00000474455 UFL1O94874 794 aa24.96■■□□□ 1.59
SMIM11A-204ENST00000474455 CHGBP05060 677 aa24.96■■□□□ 1.59
SMIM11A-204ENST00000474455 TBC1D16Q8TBP0 767 aa24.96■■□□□ 1.59
SMIM11A-204ENST00000474455 C7orf43Q8WVR3 580 aa24.96■■□□□ 1.59
SMIM11A-204ENST00000474455 PODXL2Q9NZ53 605 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms