RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 LEMD3Q9Y2U8 911 aa14.1□□□□□ -0.15
SEMA4D-216ENST00000474258 ZNF646O15015 1829 aaPredicted RBP14.1□□□□□ -0.15
SEMA4D-216ENST00000474258 WTIPA6NIX2 430 aaPredicted RBP14.09□□□□□ -0.15
SEMA4D-216ENST00000474258 ADM5C9JUS6 153 aa14.09□□□□□ -0.15
SEMA4D-216ENST00000474258 CSF1RP07333 972 aa14.09□□□□□ -0.15
SEMA4D-216ENST00000474258 USP17L8P0C7I0 530 aa14.09□□□□□ -0.15
SEMA4D-216ENST00000474258 HUNKP57058 714 aa14.09□□□□□ -0.15
SEMA4D-216ENST00000474258 DLK2Q6UY11 383 aa14.09□□□□□ -0.15
SEMA4D-216ENST00000474258 FAM9BQ8IZU0 186 aa14.09□□□□□ -0.15
SEMA4D-216ENST00000474258 C2orf69Q8N8R5 385 aa14.09□□□□□ -0.15
SEMA4D-216ENST00000474258 GMLQ99445 158 aa14.09□□□□□ -0.15
SEMA4D-216ENST00000474258 GBA2Q9HCG7 927 aaPredicted RBP14.09□□□□□ -0.15
SEMA4D-216ENST00000474258 GGA3Q9NZ52 723 aa14.09□□□□□ -0.15
SEMA4D-216ENST00000474258 CA12O43570 354 aa14.08□□□□□ -0.16
SEMA4D-216ENST00000474258 BRPF1P55201 1214 aaPredicted RBP14.08□□□□□ -0.16
SEMA4D-216ENST00000474258 SCARF1Q14162 830 aa14.08□□□□□ -0.16
SEMA4D-216ENST00000474258 FAM161AQ3B820 660 aa14.08□□□□□ -0.16
SEMA4D-216ENST00000474258 ANKRD2Q9GZV1 360 aa14.08□□□□□ -0.16
SEMA4D-216ENST00000474258 COA1Q9GZY4 146 aa14.08□□□□□ -0.16
SEMA4D-216ENST00000474258 MYOZ2Q9NPC6 264 aa14.08□□□□□ -0.16
SEMA4D-216ENST00000474258 SPINK5Q9NQ38 1064 aaPredicted RBP14.08□□□□□ -0.16
SEMA4D-216ENST00000474258 A0A1B0GUL6 1792 aa14.07□□□□□ -0.16
SEMA4D-216ENST00000474258 ANKRD18BA2A2Z9 1011 aa14.07□□□□□ -0.16
SEMA4D-216ENST00000474258 NOGQ13253 232 aa14.07□□□□□ -0.16
SEMA4D-216ENST00000474258 RGMBQ6NW40 437 aa14.07□□□□□ -0.16
SEMA4D-216ENST00000474258 F6X3S4 739 aa14.06□□□□□ -0.16
SEMA4D-216ENST00000474258 BEND3Q5T5X7 828 aa14.06□□□□□ -0.16
SEMA4D-216ENST00000474258 STRIP1Q5VSL9 837 aa14.06□□□□□ -0.16
SEMA4D-216ENST00000474258 ANGEL2Q5VTE6 544 aaKnown RBP14.06□□□□□ -0.16
SEMA4D-216ENST00000474258 TXNRD3Q86VQ6 643 aa14.06□□□□□ -0.16
SEMA4D-216ENST00000474258 CCDC102AQ96A19 550 aa14.06□□□□□ -0.16
SEMA4D-216ENST00000474258 ZNF804BA4D1E1 1349 aa14.06□□□□□ -0.16
SEMA4D-216ENST00000474258 ASTN2O75129 1339 aaPredicted RBP14.06□□□□□ -0.16
SEMA4D-216ENST00000474258 MYO3BQ8WXR4 1341 aa14.06□□□□□ -0.16
SEMA4D-216ENST00000474258 PITPNM2Q9BZ72 1349 aa14.06□□□□□ -0.16
SEMA4D-216ENST00000474258 KCNJ4P48050 445 aa14.05□□□□□ -0.16
SEMA4D-216ENST00000474258 MMP14P50281 582 aa14.05□□□□□ -0.16
SEMA4D-216ENST00000474258 FOXO4P98177 505 aa14.05□□□□□ -0.16
SEMA4D-216ENST00000474258 CHRNDQ07001 517 aa14.05□□□□□ -0.16
SEMA4D-216ENST00000474258 IFIT5Q13325 482 aaKnown RBP14.05□□□□□ -0.16
SEMA4D-216ENST00000474258 DACT2Q5SW24 774 aa14.05□□□□□ -0.16
SEMA4D-216ENST00000474258 TTLL5Q6EMB2 1281 aa14.05□□□□□ -0.16
SEMA4D-216ENST00000474258 OGFOD1Q8N543 542 aa14.05□□□□□ -0.16
SEMA4D-216ENST00000474258 FBXW7Q969H0 707 aa14.05□□□□□ -0.16
SEMA4D-216ENST00000474258 CDCA5Q96FF9 252 aa14.05□□□□□ -0.16
SEMA4D-216ENST00000474258 TSKSQ9UJT2 592 aa14.05□□□□□ -0.16
SEMA4D-216ENST00000474258 ZNF157P51786 506 aaPredicted RBP14.04□□□□□ -0.16
SEMA4D-216ENST00000474258 CHMP3Q9Y3E7 222 aa14.04□□□□□ -0.16
SEMA4D-216ENST00000474258 FAM155AB1AL88 458 aaPredicted RBP14.03□□□□□ -0.16
SEMA4D-216ENST00000474258 GRM8O00222 908 aa14.03□□□□□ -0.16
SEMA4D-216ENST00000474258 ZIC5Q96T25 663 aa14.03□□□□□ -0.16
SEMA4D-216ENST00000474258 MXD3Q9BW11 206 aa14.03□□□□□ -0.16
SEMA4D-216ENST00000474258 PAPPA2Q9BXP8 1791 aa14.03□□□□□ -0.16
SEMA4D-216ENST00000474258 ECM29Q5VYK3 1845 aa14.03□□□□□ -0.16
SEMA4D-216ENST00000474258 ALDH1L1O75891 902 aa14.02□□□□□ -0.17
SEMA4D-216ENST00000474258 KLRK1P26718 216 aa14.02□□□□□ -0.17
SEMA4D-216ENST00000474258 FKBP1BP68106 108 aa14.02□□□□□ -0.17
SEMA4D-216ENST00000474258 NBPF9Q3BBW0 867 aa14.02□□□□□ -0.17
SEMA4D-216ENST00000474258 SLC4A10Q6U841 1118 aa14.02□□□□□ -0.17
SEMA4D-216ENST00000474258 LMBR1LQ6UX01 489 aa14.02□□□□□ -0.17
SEMA4D-216ENST00000474258 ABHD8Q96I13 439 aa14.02□□□□□ -0.17
SEMA4D-216ENST00000474258 CD209Q9NNX6 404 aa14.02□□□□□ -0.17
SEMA4D-216ENST00000474258 C9orf78Q9NZ63 289 aaPredicted RBP14.02□□□□□ -0.17
SEMA4D-216ENST00000474258 HDAC9Q9UKV0 1011 aa14.02□□□□□ -0.17
SEMA4D-216ENST00000474258 WNT10BO00744 389 aa14.01□□□□□ -0.17
SEMA4D-216ENST00000474258 TAF5LO75529 589 aa14.01□□□□□ -0.17
SEMA4D-216ENST00000474258 SLC10A3P09131 477 aa14.01□□□□□ -0.17
SEMA4D-216ENST00000474258 GTF2IP78347 998 aa14.01□□□□□ -0.17
SEMA4D-216ENST00000474258 CCDC57Q2TAC2 916 aa14.01□□□□□ -0.17
SEMA4D-216ENST00000474258 TAF7LQ5H9L4 462 aa14.01□□□□□ -0.17
SEMA4D-216ENST00000474258 C15orf52Q6ZUT6 534 aaKnown RBP14.01□□□□□ -0.17
SEMA4D-216ENST00000474258 HELBQ8NG08 1087 aaPredicted RBP14.01□□□□□ -0.17
SEMA4D-216ENST00000474258 SRCIN1Q9C0H9 1055 aa14.01□□□□□ -0.17
SEMA4D-216ENST00000474258 ZNF521Q96K83 1311 aa14□□□□□ -0.17
SEMA4D-216ENST00000474258 KIF23Q02241 960 aaPredicted RBP14□□□□□ -0.17
SEMA4D-216ENST00000474258 EPHA10Q5JZY3 1008 aa14□□□□□ -0.17
SEMA4D-216ENST00000474258 LDHAL6AQ6ZMR3 332 aa14□□□□□ -0.17
SEMA4D-216ENST00000474258 KIAA0825Q8IV33 1275 aa14□□□□□ -0.17
SEMA4D-216ENST00000474258 SCAF8Q9UPN6 1271 aaKnown RBP14□□□□□ -0.17
SEMA4D-216ENST00000474258 IRS2Q9Y4H2 1338 aa13.99□□□□□ -0.17
SEMA4D-216ENST00000474258 SNAP23O00161 211 aa13.99□□□□□ -0.17
SEMA4D-216ENST00000474258 ZNF804AQ7Z570 1209 aa13.99□□□□□ -0.17
SEMA4D-216ENST00000474258 REM2Q8IYK8 340 aaPredicted RBP13.99□□□□□ -0.17
SEMA4D-216ENST00000474258 ZNF594Q96JF6 807 aaPredicted RBP13.99□□□□□ -0.17
SEMA4D-216ENST00000474258 CNNM1Q9NRU3 951 aa13.99□□□□□ -0.17
SEMA4D-216ENST00000474258 SAGE1Q9NXZ1 904 aa13.99□□□□□ -0.17
SEMA4D-216ENST00000474258 SASH1O94885 1247 aa13.98□□□□□ -0.17
SEMA4D-216ENST00000474258 NF2P35240 595 aa13.98□□□□□ -0.17
SEMA4D-216ENST00000474258 CSRNP1Q96S65 589 aa13.98□□□□□ -0.17
SEMA4D-216ENST00000474258 PLIN1O60240 522 aa13.97□□□□□ -0.17
SEMA4D-216ENST00000474258 IL1R1P14778 569 aa13.97□□□□□ -0.17
SEMA4D-216ENST00000474258 TTLL12Q14166 644 aaPredicted RBP13.97□□□□□ -0.17
SEMA4D-216ENST00000474258 PRAMEF18Q5VWM3 479 aa13.97□□□□□ -0.17
SEMA4D-216ENST00000474258 MOB2Q70IA6 237 aa13.97□□□□□ -0.17
SEMA4D-216ENST00000474258 RASAL3Q86YV0 1011 aa13.97□□□□□ -0.17
SEMA4D-216ENST00000474258 APOBEC3FQ8IUX4 373 aaKnown RBP13.97□□□□□ -0.17
SEMA4D-216ENST00000474258 ZBED3Q96IU2 234 aaPredicted RBP13.97□□□□□ -0.17
SEMA4D-216ENST00000474258 RNF186Q9NXI6 227 aa13.97□□□□□ -0.17
SEMA4D-216ENST00000474258 E9PSI1 815 aa13.96□□□□□ -0.17
SEMA4D-216ENST00000474258 UBE2Q2LH0YL09 131 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms