RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 GGA3Q9NZ52 723 aa20.69■□□□□ 0.9
CPA4-205ENST00000474254 ZNF646O15015 1829 aaPredicted RBP20.69■□□□□ 0.9
CPA4-205ENST00000474254 CASP8AP2Q9UKL3 1982 aa20.68■□□□□ 0.9
CPA4-205ENST00000474254 ATP2B4P23634 1241 aa20.67■□□□□ 0.9
CPA4-205ENST00000474254 RSBN1LQ6PCB5 846 aaPredicted RBP20.67■□□□□ 0.9
CPA4-205ENST00000474254 AGBL3Q8NEM8 1001 aa20.67■□□□□ 0.9
CPA4-205ENST00000474254 ZNF157P51786 506 aaPredicted RBP20.66■□□□□ 0.9
CPA4-205ENST00000474254 CCDC102AQ96A19 550 aa20.66■□□□□ 0.9
CPA4-205ENST00000474254 ZNF609O15014 1411 aa20.66■□□□□ 0.9
CPA4-205ENST00000474254 CSF1RP07333 972 aa20.65■□□□□ 0.9
CPA4-205ENST00000474254 FAM161AQ3B820 660 aa20.65■□□□□ 0.9
CPA4-205ENST00000474254 CDCA7LQ96GN5 454 aa20.65■□□□□ 0.9
CPA4-205ENST00000474254 BSDC1Q9NW68 430 aaPredicted RBP20.65■□□□□ 0.9
CPA4-205ENST00000474254 AKAP11Q9UKA4 1901 aa20.65■□□□□ 0.9
CPA4-205ENST00000474254 ITGA6P23229 1130 aa20.64■□□□□ 0.89
CPA4-205ENST00000474254 TRMT2AQ8IZ69 625 aaKnown RBP20.64■□□□□ 0.89
CPA4-205ENST00000474254 MRPL50Q8N5N7 158 aaKnown RBP20.64■□□□□ 0.89
CPA4-205ENST00000474254 CDCA5Q96FF9 252 aa20.64■□□□□ 0.89
CPA4-205ENST00000474254 ZIC5Q96T25 663 aa20.64■□□□□ 0.89
CPA4-205ENST00000474254 USP17L3A6NCW0 530 aa20.63■□□□□ 0.89
CPA4-205ENST00000474254 USP17L4A6NCW7 530 aa20.63■□□□□ 0.89
CPA4-205ENST00000474254 GRM8O00222 908 aa20.63■□□□□ 0.89
CPA4-205ENST00000474254 ALDH1L1O75891 902 aa20.63■□□□□ 0.89
CPA4-205ENST00000474254 ZNF280AP59817 542 aaPredicted RBP20.63■□□□□ 0.89
CPA4-205ENST00000474254 SCARF1Q14162 830 aa20.63■□□□□ 0.89
CPA4-205ENST00000474254 ANGEL2Q5VTE6 544 aaKnown RBP20.63■□□□□ 0.89
CPA4-205ENST00000474254 USP17L1Q7RTZ2 530 aa20.63■□□□□ 0.89
CPA4-205ENST00000474254 PODNQ7Z5L7 613 aa20.63■□□□□ 0.89
CPA4-205ENST00000474254 MCOLN1Q9GZU1 580 aa20.63■□□□□ 0.89
CPA4-205ENST00000474254 MED23Q9ULK4 1368 aa20.62■□□□□ 0.89
CPA4-205ENST00000474254 ASTN2O75129 1339 aaPredicted RBP20.62■□□□□ 0.89
CPA4-205ENST00000474254 PTPRCP08575 1304 aa20.62■□□□□ 0.89
CPA4-205ENST00000474254 FAM155AB1AL88 458 aaPredicted RBP20.62■□□□□ 0.89
CPA4-205ENST00000474254 USP17L8P0C7I0 530 aa20.62■□□□□ 0.89
CPA4-205ENST00000474254 IGHMBP2P38935 993 aaKnown RBP20.62■□□□□ 0.89
CPA4-205ENST00000474254 DGKZQ13574 1117 aa20.62■□□□□ 0.89
CPA4-205ENST00000474254 SLC4A10Q6U841 1118 aa20.62■□□□□ 0.89
CPA4-205ENST00000474254 SSH1Q8WYL5 1049 aa20.62■□□□□ 0.89
CPA4-205ENST00000474254 SRCIN1Q9C0H9 1055 aa20.62■□□□□ 0.89
CPA4-205ENST00000474254 MYOZ2Q9NPC6 264 aa20.62■□□□□ 0.89
CPA4-205ENST00000474254 MINPP1Q9UNW1 487 aa20.62■□□□□ 0.89
CPA4-205ENST00000474254 FOXO4P98177 505 aa20.61■□□□□ 0.89
CPA4-205ENST00000474254 KIF23Q02241 960 aaPredicted RBP20.61■□□□□ 0.89
CPA4-205ENST00000474254 FBXW7Q969H0 707 aa20.61■□□□□ 0.89
CPA4-205ENST00000474254 SAGE1Q9NXZ1 904 aa20.61■□□□□ 0.89
CPA4-205ENST00000474254 PAPPA2Q9BXP8 1791 aa20.6■□□□□ 0.89
CPA4-205ENST00000474254 PITPNM2Q9BZ72 1349 aa20.59■□□□□ 0.89
CPA4-205ENST00000474254 SLC10A3P09131 477 aa20.59■□□□□ 0.89
CPA4-205ENST00000474254 MLLT1Q03111 559 aaPredicted RBP20.59■□□□□ 0.89
CPA4-205ENST00000474254 ALDH1L2Q3SY69 923 aa20.59■□□□□ 0.89
CPA4-205ENST00000474254 DIEXFQ68CQ4 756 aaKnown RBP20.59■□□□□ 0.89
CPA4-205ENST00000474254 MPHOSPH8Q99549 860 aa20.59■□□□□ 0.89
CPA4-205ENST00000474254 ANKRD18BA2A2Z9 1011 aa20.58■□□□□ 0.89
CPA4-205ENST00000474254 CT47B1P0C2W7 299 aaPredicted RBP20.58■□□□□ 0.89
CPA4-205ENST00000474254 CCT4P50991 539 aaKnown RBP20.58■□□□□ 0.89
CPA4-205ENST00000474254 FKBP1BP68106 108 aa20.58■□□□□ 0.89
CPA4-205ENST00000474254 GMLQ99445 158 aa20.58■□□□□ 0.89
CPA4-205ENST00000474254 C9orf78Q9NZ63 289 aaPredicted RBP20.58■□□□□ 0.89
CPA4-205ENST00000474254 UTYO14607 1347 aa20.57■□□□□ 0.88
CPA4-205ENST00000474254 MYO3BQ8WXR4 1341 aa20.57■□□□□ 0.88
CPA4-205ENST00000474254 WTIPA6NIX2 430 aaPredicted RBP20.57■□□□□ 0.88
CPA4-205ENST00000474254 EPHA10Q5JZY3 1008 aa20.57■□□□□ 0.88
CPA4-205ENST00000474254 OGFOD1Q8N543 542 aa20.57■□□□□ 0.88
CPA4-205ENST00000474254 TRPA1O75762 1119 aa20.56■□□□□ 0.88
CPA4-205ENST00000474254 IFIT5Q13325 482 aaKnown RBP20.56■□□□□ 0.88
CPA4-205ENST00000474254 LMBR1LQ6UX01 489 aa20.56■□□□□ 0.88
CPA4-205ENST00000474254 REM2Q8IYK8 340 aaPredicted RBP20.56■□□□□ 0.88
CPA4-205ENST00000474254 ANKRD2Q9GZV1 360 aa20.56■□□□□ 0.88
CPA4-205ENST00000474254 COA1Q9GZY4 146 aa20.56■□□□□ 0.88
CPA4-205ENST00000474254 SMC4Q9NTJ3 1288 aa20.56■□□□□ 0.88
CPA4-205ENST00000474254 RNF186Q9NXI6 227 aa20.56■□□□□ 0.88
CPA4-205ENST00000474254 LEMD3Q9Y2U8 911 aa20.56■□□□□ 0.88
CPA4-205ENST00000474254 RASAL3Q86YV0 1011 aa20.55■□□□□ 0.88
CPA4-205ENST00000474254 MIER1Q8N108 512 aa20.55■□□□□ 0.88
CPA4-205ENST00000474254 CHMP3Q9Y3E7 222 aa20.55■□□□□ 0.88
CPA4-205ENST00000474254 KCNJ4P48050 445 aa20.54■□□□□ 0.88
CPA4-205ENST00000474254 CHRNDQ07001 517 aa20.54■□□□□ 0.88
CPA4-205ENST00000474254 TTLL12Q14166 644 aaPredicted RBP20.54■□□□□ 0.88
CPA4-205ENST00000474254 DACT2Q5SW24 774 aa20.54■□□□□ 0.88
CPA4-205ENST00000474254 STRIP1Q5VSL9 837 aa20.54■□□□□ 0.88
CPA4-205ENST00000474254 KAZALD1Q96I82 304 aa20.54■□□□□ 0.88
CPA4-205ENST00000474254 SUCLG2Q96I99 432 aa20.54■□□□□ 0.88
CPA4-205ENST00000474254 ZNF804BA4D1E1 1349 aa20.53■□□□□ 0.88
CPA4-205ENST00000474254 NBPF7P0C2Y1 421 aaPredicted RBP20.53■□□□□ 0.88
CPA4-205ENST00000474254 NF2P35240 595 aa20.53■□□□□ 0.88
CPA4-205ENST00000474254 RGS19P49795 217 aa20.53■□□□□ 0.88
CPA4-205ENST00000474254 CSRNP1Q96S65 589 aa20.53■□□□□ 0.88
CPA4-205ENST00000474254 MXD3Q9BW11 206 aa20.53■□□□□ 0.88
CPA4-205ENST00000474254 CCDC57Q2TAC2 916 aa20.52■□□□□ 0.88
CPA4-205ENST00000474254 NBPF9Q3BBW0 867 aa20.52■□□□□ 0.88
CPA4-205ENST00000474254 HDAC9Q9UKV0 1011 aa20.52■□□□□ 0.88
CPA4-205ENST00000474254 SCAF8Q9UPN6 1271 aaKnown RBP20.52■□□□□ 0.88
CPA4-205ENST00000474254 KLRK1P26718 216 aa20.51■□□□□ 0.87
CPA4-205ENST00000474254 MMP14P50281 582 aa20.51■□□□□ 0.87
CPA4-205ENST00000474254 TXNRD3Q86VQ6 643 aa20.51■□□□□ 0.87
CPA4-205ENST00000474254 RABL6Q3YEC7 729 aaPredicted RBP20.5■□□□□ 0.87
CPA4-205ENST00000474254 TAF7LQ5H9L4 462 aa20.5■□□□□ 0.87
CPA4-205ENST00000474254 TTLL5Q6EMB2 1281 aa20.5■□□□□ 0.87
CPA4-205ENST00000474254 IRS2Q9Y4H2 1338 aa20.5■□□□□ 0.87
CPA4-205ENST00000474254 ARAP2Q8WZ64 1704 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms