RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 SF3B2Q13435 895 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-213ENST00000474240 C11orf91Q3C1V1 193 aa6.08□□□□□ -1.44
ECHDC1-213ENST00000474240 TXNDC11Q6PKC3 985 aa6.08□□□□□ -1.44
ECHDC1-213ENST00000474240 FAM46AQ96IP4 442 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-213ENST00000474240 MYRFLQ96LU7 910 aa6.08□□□□□ -1.44
ECHDC1-213ENST00000474240 FAM13BQ9NYF5 915 aa6.08□□□□□ -1.44
ECHDC1-213ENST00000474240 KCNK4Q9NYG8 393 aa6.08□□□□□ -1.44
ECHDC1-213ENST00000474240 ANGEL1Q9UNK9 670 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-213ENST00000474240 USP20Q9Y2K6 914 aa6.08□□□□□ -1.44
ECHDC1-213ENST00000474240 LOC102724428A0A0B4J2F2 783 aa6.07□□□□□ -1.44
ECHDC1-213ENST00000474240 LGR5O75473 907 aa6.07□□□□□ -1.44
ECHDC1-213ENST00000474240 BRD2P25440 801 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-213ENST00000474240 SIK1P57059 783 aa6.07□□□□□ -1.44
ECHDC1-213ENST00000474240 DGKZQ13574 1117 aa6.07□□□□□ -1.44
ECHDC1-213ENST00000474240 HELQQ8TDG4 1101 aa6.07□□□□□ -1.44
ECHDC1-213ENST00000474240 QTRT2Q9H974 415 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-213ENST00000474240 C11orf16Q9NQ32 467 aa6.07□□□□□ -1.44
ECHDC1-213ENST00000474240 GNEQ9Y223 722 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-213ENST00000474240 WDR64B1ANS9 1081 aa6.06□□□□□ -1.44
ECHDC1-213ENST00000474240 LINC01387J3KSC0 135 aa6.06□□□□□ -1.44
ECHDC1-213ENST00000474240 PSAPP07602 524 aa6.06□□□□□ -1.44
ECHDC1-213ENST00000474240 MKNK1Q9BUB5 465 aa6.06□□□□□ -1.44
ECHDC1-213ENST00000474240 CARD10Q9BWT7 1032 aa6.06□□□□□ -1.44
ECHDC1-213ENST00000474240 KCNF1Q9H3M0 494 aa6.06□□□□□ -1.44
ECHDC1-213ENST00000474240 SLAIN2Q9P270 581 aa6.06□□□□□ -1.44
ECHDC1-213ENST00000474240 PPME1Q9Y570 386 aa6.06□□□□□ -1.44
ECHDC1-213ENST00000474240 CD68P34810 354 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-213ENST00000474240 ALKBH2Q6NS38 261 aa6.05□□□□□ -1.44
ECHDC1-213ENST00000474240 PHLDB3Q6NSJ2 640 aa6.05□□□□□ -1.44
ECHDC1-213ENST00000474240 KIAA1211Q6ZU35 1233 aa6.05□□□□□ -1.44
ECHDC1-213ENST00000474240 BEND4Q6ZU67 534 aa6.05□□□□□ -1.44
ECHDC1-213ENST00000474240 FAM20CQ8IXL6 584 aa6.05□□□□□ -1.44
ECHDC1-213ENST00000474240 ASIC4Q96FT7 647 aa6.05□□□□□ -1.44
ECHDC1-213ENST00000474240 RBSNQ9H1K0 784 aa6.05□□□□□ -1.44
ECHDC1-213ENST00000474240 STIM2Q9P246 746 aa6.05□□□□□ -1.44
ECHDC1-213ENST00000474240 MMP20O60882 483 aa6.04□□□□□ -1.44
ECHDC1-213ENST00000474240 XYLBO75191 536 aa6.04□□□□□ -1.44
ECHDC1-213ENST00000474240 FAM13AO94988 1023 aa6.04□□□□□ -1.44
ECHDC1-213ENST00000474240 RPLP1P05386 114 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-213ENST00000474240 CDC25BP30305 580 aa6.04□□□□□ -1.44
ECHDC1-213ENST00000474240 COX20Q5RI15 118 aa6.04□□□□□ -1.44
ECHDC1-213ENST00000474240 CBLL1Q75N03 491 aa6.04□□□□□ -1.44
ECHDC1-213ENST00000474240 TXNDC2Q86VQ3 553 aa6.04□□□□□ -1.44
ECHDC1-213ENST00000474240 CLEC10AQ8IUN9 316 aa6.04□□□□□ -1.44
ECHDC1-213ENST00000474240 MFSD14AQ96MC6 490 aa6.04□□□□□ -1.44
ECHDC1-213ENST00000474240 KRTAP4-5Q9BYR2 181 aa6.04□□□□□ -1.44
ECHDC1-213ENST00000474240 MUC3BQ9H195 1237 aa6.04□□□□□ -1.44
ECHDC1-213ENST00000474240 RTCBQ9Y3I0 505 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-213ENST00000474240 MICAL2O94851 1124 aa6.03□□□□□ -1.44
ECHDC1-213ENST00000474240 BMP3P12645 472 aa6.03□□□□□ -1.44
ECHDC1-213ENST00000474240 PREPP48147 710 aa6.03□□□□□ -1.44
ECHDC1-213ENST00000474240 DUOXA2Q1HG44 320 aa6.03□□□□□ -1.44
ECHDC1-213ENST00000474240 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-213ENST00000474240 UBASH3BQ8TF42 649 aa6.03□□□□□ -1.44
ECHDC1-213ENST00000474240 GTF3C2Q8WUA4 911 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-213ENST00000474240 FAM83CQ9BQN1 747 aa6.03□□□□□ -1.44
ECHDC1-213ENST00000474240 LACRTQ9GZZ8 138 aa6.03□□□□□ -1.44
ECHDC1-213ENST00000474240 PIM2Q9P1W9 311 aa6.03□□□□□ -1.44
ECHDC1-213ENST00000474240 PCSK2P16519 638 aa6.02□□□□□ -1.45
ECHDC1-213ENST00000474240 NPR3P17342 541 aa6.02□□□□□ -1.45
ECHDC1-213ENST00000474240 ITGB5P18084 799 aa6.02□□□□□ -1.45
ECHDC1-213ENST00000474240 FKBP4Q02790 459 aaKnown RBP eCLIP6.02□□□□□ -1.45
ECHDC1-213ENST00000474240 MSMPQ1L6U9 139 aa6.02□□□□□ -1.45
ECHDC1-213ENST00000474240 NFXL1Q6ZNB6 911 aa6.02□□□□□ -1.45
ECHDC1-213ENST00000474240 RGL4Q8IZJ4 473 aa6.02□□□□□ -1.45
ECHDC1-213ENST00000474240 FOXD4L4Q8WXT5 416 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-213ENST00000474240 CCDC39Q9UFE4 941 aa6.02□□□□□ -1.45
ECHDC1-213ENST00000474240 CARNS1A5YM72 827 aa6.01□□□□□ -1.45
ECHDC1-213ENST00000474240 TM4SF5O14894 197 aa6.01□□□□□ -1.45
ECHDC1-213ENST00000474240 DDX3YO15523 660 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-213ENST00000474240 SART1O43290 800 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-213ENST00000474240 EGFRP00533 1210 aa6.01□□□□□ -1.45
ECHDC1-213ENST00000474240 HOXD8P13378 290 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-213ENST00000474240 SOX18P35713 384 aa6.01□□□□□ -1.45
ECHDC1-213ENST00000474240 ATP11AP98196 1134 aa6.01□□□□□ -1.45
ECHDC1-213ENST00000474240 NAA30Q147X3 362 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-213ENST00000474240 ZNF648Q5T619 568 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-213ENST00000474240 TP53INP2Q8IXH6 220 aa6.01□□□□□ -1.45
ECHDC1-213ENST00000474240 CMTR1Q8N1G2 835 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-213ENST00000474240 SEPT3Q9UH03 358 aa6.01□□□□□ -1.45
ECHDC1-213ENST00000474240 LRFN2Q9ULH4 789 aa6.01□□□□□ -1.45
ECHDC1-213ENST00000474240 TNFRSF10BO14763 440 aa6□□□□□ -1.45
ECHDC1-213ENST00000474240 ICMTO60725 284 aa6□□□□□ -1.45
ECHDC1-213ENST00000474240 ADAM11O75078 769 aa6□□□□□ -1.45
ECHDC1-213ENST00000474240 ABL1P00519 1130 aa6□□□□□ -1.45
ECHDC1-213ENST00000474240 USP5P45974 858 aa6□□□□□ -1.45
ECHDC1-213ENST00000474240 ZNF124Q15973 351 aa6□□□□□ -1.45
ECHDC1-213ENST00000474240 NOM1Q5C9Z4 860 aaKnown RBP6□□□□□ -1.45
ECHDC1-213ENST00000474240 SPOCD1Q6ZMY3 1216 aa6□□□□□ -1.45
ECHDC1-213ENST00000474240 VSIG10LQ86VR7 867 aa6□□□□□ -1.45
ECHDC1-213ENST00000474240 TREML1Q86YW5 311 aa6□□□□□ -1.45
ECHDC1-213ENST00000474240 GLYCTKQ8IVS8 523 aa6□□□□□ -1.45
ECHDC1-213ENST00000474240 FBXL6Q8N531 539 aa6□□□□□ -1.45
ECHDC1-213ENST00000474240 FNDC3AQ9Y2H6 1198 aaKnown RBP6□□□□□ -1.45
ECHDC1-213ENST00000474240 LEMD3Q9Y2U8 911 aa6□□□□□ -1.45
ECHDC1-213ENST00000474240 OPLAHO14841 1288 aa5.99□□□□□ -1.45
ECHDC1-213ENST00000474240 JUNBP17275 347 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-213ENST00000474240 COL19A1Q14993 1142 aa5.99□□□□□ -1.45
ECHDC1-213ENST00000474240 FBLN7Q53RD9 439 aa5.99□□□□□ -1.45
ECHDC1-213ENST00000474240 ADAMTSL4Q6UY14 1074 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms