RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 PI16Q6UXB8 463 aa25.11■■□□□ 1.61
RNF220-209ENST00000474064 SMARCC1Q92922 1105 aaPredicted RBP25.11■■□□□ 1.61
RNF220-209ENST00000474064 ANKRD36CQ5JPF3 1778 aa25.11■■□□□ 1.61
RNF220-209ENST00000474064 RFX7Q2KHR2 1363 aa25.11■■□□□ 1.61
RNF220-209ENST00000474064 JCADQ9P266 1359 aa25.11■■□□□ 1.61
RNF220-209ENST00000474064 ZSCAN20P17040 1043 aaPredicted RBP25.11■■□□□ 1.61
RNF220-209ENST00000474064 PSMA5P28066 241 aa25.11■■□□□ 1.61
RNF220-209ENST00000474064 SMIM5Q71RC9 77 aa25.11■■□□□ 1.61
RNF220-209ENST00000474064 CCDC83Q8IWF9 413 aa25.11■■□□□ 1.61
RNF220-209ENST00000474064 NIP7Q9Y221 180 aaKnown RBP eCLIP25.11■■□□□ 1.61
RNF220-209ENST00000474064 RIC1Q4ADV7 1423 aa25.11■■□□□ 1.61
RNF220-209ENST00000474064 BLOC1S2Q6QNY1 142 aa25.1■■□□□ 1.61
RNF220-209ENST00000474064 HELBQ8NG08 1087 aaPredicted RBP25.1■■□□□ 1.61
RNF220-209ENST00000474064 UTP14AQ9BVJ6 771 aaKnown RBP25.1■■□□□ 1.61
RNF220-209ENST00000474064 SH3TC1Q8TE82 1336 aa25.1■■□□□ 1.61
RNF220-209ENST00000474064 RPAP1Q9BWH6 1393 aaPredicted RBP25.09■■□□□ 1.61
RNF220-209ENST00000474064 BRD1O95696 1058 aa25.09■■□□□ 1.61
RNF220-209ENST00000474064 PTMAP06454 111 aaKnown RBP25.09■■□□□ 1.61
RNF220-209ENST00000474064 MYH14Q7Z406 1995 aaKnown RBP25.09■■□□□ 1.61
RNF220-209ENST00000474064 DNTTIP2Q5QJE6 756 aaKnown RBP25.09■■□□□ 1.61
RNF220-209ENST00000474064 USP21Q9UK80 565 aa25.09■■□□□ 1.61
RNF220-209ENST00000474064 ZAP70P43403 619 aa25.08■■□□□ 1.61
RNF220-209ENST00000474064 TSC1Q92574 1164 aa25.08■■□□□ 1.61
RNF220-209ENST00000474064 UTP14CQ5TAP6 766 aaKnown RBP25.08■■□□□ 1.61
RNF220-209ENST00000474064 USPL1Q5W0Q7 1092 aa25.08■■□□□ 1.61
RNF220-209ENST00000474064 NECAB1Q8N987 351 aa25.08■■□□□ 1.61
RNF220-209ENST00000474064 LINC00116Q8NCU8 138 aa25.08■■□□□ 1.61
RNF220-209ENST00000474064 RNF113AO15541 343 aaKnown RBP25.07■■□□□ 1.6
RNF220-209ENST00000474064 KIAA2012Q0VF49 1180 aa25.07■■□□□ 1.6
RNF220-209ENST00000474064 HMG20BQ9P0W2 317 aa25.07■■□□□ 1.6
RNF220-209ENST00000474064 ME3Q16798 604 aa25.07■■□□□ 1.6
RNF220-209ENST00000474064 ZMYM1Q5SVZ6 1142 aa25.07■■□□□ 1.6
RNF220-209ENST00000474064 SEC31BQ9NQW1 1179 aa25.07■■□□□ 1.6
RNF220-209ENST00000474064 TPCN1Q9ULQ1 816 aa25.07■■□□□ 1.6
RNF220-209ENST00000474064 U3KPZ7 1027 aaPredicted RBP25.07■■□□□ 1.6
RNF220-209ENST00000474064 MYRIPQ8NFW9 859 aa25.06■■□□□ 1.6
RNF220-209ENST00000474064 HELLSQ9NRZ9 838 aa25.06■■□□□ 1.6
RNF220-209ENST00000474064 CYP21A2P08686 494 aa25.06■■□□□ 1.6
RNF220-209ENST00000474064 SMC3Q9UQE7 1217 aa25.06■■□□□ 1.6
RNF220-209ENST00000474064 RPS6KB1P23443 525 aa25.06■■□□□ 1.6
RNF220-209ENST00000474064 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.06■■□□□ 1.6
RNF220-209ENST00000474064 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.06■■□□□ 1.6
RNF220-209ENST00000474064 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.06■■□□□ 1.6
RNF220-209ENST00000474064 MAST3O60307 1309 aa25.05■■□□□ 1.6
RNF220-209ENST00000474064 M0R2C6 588 aa25.05■■□□□ 1.6
RNF220-209ENST00000474064 WASHC4Q2M389 1173 aa25.05■■□□□ 1.6
RNF220-209ENST00000474064 FNBP4Q8N3X1 1017 aaPredicted RBP25.05■■□□□ 1.6
RNF220-209ENST00000474064 VGLL2Q8N8G2 317 aa25.05■■□□□ 1.6
RNF220-209ENST00000474064 PDE8BO95263 885 aa25.04■■□□□ 1.6
RNF220-209ENST00000474064 MYH3P11055 1940 aa25.04■■□□□ 1.6
RNF220-209ENST00000474064 SNAP23O00161 211 aa25.04■■□□□ 1.6
RNF220-209ENST00000474064 OSBP2Q969R2 916 aa25.04■■□□□ 1.6
RNF220-209ENST00000474064 ZSCAN31Q96LW9 406 aaPredicted RBP25.04■■□□□ 1.6
RNF220-209ENST00000474064 A0A0G2JLW4 131 aa25.03■■□□□ 1.6
RNF220-209ENST00000474064 MCAMP43121 646 aa25.03■■□□□ 1.6
RNF220-209ENST00000474064 PARP10Q53GL7 1025 aa25.03■■□□□ 1.6
RNF220-209ENST00000474064 MPNDQ8N594 471 aa25.03■■□□□ 1.6
RNF220-209ENST00000474064 ST3GAL1Q11201 340 aa25.03■■□□□ 1.6
RNF220-209ENST00000474064 CBX1P83916 185 aa25.02■■□□□ 1.6
RNF220-209ENST00000474064 TSGA10IPQ3SY00 556 aa25.02■■□□□ 1.6
RNF220-209ENST00000474064 BICDL1Q6ZP65 573 aa25.02■■□□□ 1.6
RNF220-209ENST00000474064 NEK1Q96PY6 1258 aa25.02■■□□□ 1.6
RNF220-209ENST00000474064 SH2B1Q9NRF2 756 aaPredicted RBP25.02■■□□□ 1.6
RNF220-209ENST00000474064 NTSR2O95665 410 aa25.02■■□□□ 1.6
RNF220-209ENST00000474064 HSPD1P10809 573 aaKnown RBP25.02■■□□□ 1.6
RNF220-209ENST00000474064 ZNF710Q8N1W2 664 aa25.02■■□□□ 1.6
RNF220-209ENST00000474064 MPHOSPH8Q99549 860 aa25.02■■□□□ 1.6
RNF220-209ENST00000474064 GJB2P29033 226 aa25.01■■□□□ 1.59
RNF220-209ENST00000474064 STK3Q13188 491 aa25.01■■□□□ 1.59
RNF220-209ENST00000474064 TOB2Q14106 344 aaPredicted RBP25.01■■□□□ 1.59
RNF220-209ENST00000474064 KRT32Q14532 448 aa25.01■■□□□ 1.59
RNF220-209ENST00000474064 WDR33Q9C0J8 1336 aaKnown RBP25.01■■□□□ 1.59
RNF220-209ENST00000474064 MEX3CQ5U5Q3 659 aaKnown RBP25.01■■□□□ 1.59
RNF220-209ENST00000474064 PHKA1P46020 1223 aa25■■□□□ 1.59
RNF220-209ENST00000474064 LRRC2Q9BYS8 371 aa25■■□□□ 1.59
RNF220-209ENST00000474064 SYT1P21579 422 aa25■■□□□ 1.59
RNF220-209ENST00000474064 ZNF652Q9Y2D9 606 aa25■■□□□ 1.59
RNF220-209ENST00000474064 STOX1Q6ZVD7 989 aa24.99■■□□□ 1.59
RNF220-209ENST00000474064 AK7Q96M32 723 aa24.99■■□□□ 1.59
RNF220-209ENST00000474064 DSCC1Q9BVC3 393 aa24.99■■□□□ 1.59
RNF220-209ENST00000474064 CCDC152Q4G0S7 254 aa24.99■■□□□ 1.59
RNF220-209ENST00000474064 CCDC102BQ68D86 513 aa24.99■■□□□ 1.59
RNF220-209ENST00000474064 ZNF830Q96NB3 372 aaPredicted RBP24.99■■□□□ 1.59
RNF220-209ENST00000474064 GDPD2Q9HCC8 539 aa24.99■■□□□ 1.59
RNF220-209ENST00000474064 STX6O43752 255 aa24.98■■□□□ 1.59
RNF220-209ENST00000474064 ANKRD1Q15327 319 aa24.98■■□□□ 1.59
RNF220-209ENST00000474064 PUM3Q15397 648 aaKnown RBP24.98■■□□□ 1.59
RNF220-209ENST00000474064 TTLL5Q6EMB2 1281 aa24.98■■□□□ 1.59
RNF220-209ENST00000474064 MROH5Q6ZUA9 1318 aa24.97■■□□□ 1.59
RNF220-209ENST00000474064 LRRFIP1Q32MZ4 808 aaKnown RBP24.97■■□□□ 1.59
RNF220-209ENST00000474064 PUS7LQ9H0K6 701 aaKnown RBP24.97■■□□□ 1.59
RNF220-209ENST00000474064 MBD3O95983 291 aa24.97■■□□□ 1.59
RNF220-209ENST00000474064 Q6ZUG5 572 aa24.97■■□□□ 1.59
RNF220-209ENST00000474064 PRIMPOLQ96LW4 560 aa24.97■■□□□ 1.59
RNF220-209ENST00000474064 LPIN2Q92539 896 aa24.96■■□□□ 1.59
RNF220-209ENST00000474064 TSPY26PQ9H489 355 aa24.96■■□□□ 1.59
RNF220-209ENST00000474064 ERFEQ4G0M1 354 aa24.96■■□□□ 1.59
RNF220-209ENST00000474064 RREB1Q92766 1687 aa24.96■■□□□ 1.59
RNF220-209ENST00000474064 IDH1O75874 414 aaKnown RBP24.95■■□□□ 1.59
RNF220-209ENST00000474064 FGD1P98174 961 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms