RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 SLC10A3P09131 477 aa17.16■□□□□ 0.34
COPS7B-219ENST00000474042 USP17L8P0C7I0 530 aa17.16■□□□□ 0.34
COPS7B-219ENST00000474042 CCT4P50991 539 aaKnown RBP17.16■□□□□ 0.34
COPS7B-219ENST00000474042 CASP7P55210 303 aa17.16■□□□□ 0.34
COPS7B-219ENST00000474042 FLIIQ13045 1269 aa17.16■□□□□ 0.34
COPS7B-219ENST00000474042 SCARF1Q14162 830 aa17.16■□□□□ 0.34
COPS7B-219ENST00000474042 CCDC102AQ96A19 550 aa17.16■□□□□ 0.34
COPS7B-219ENST00000474042 MYOZ2Q9NPC6 264 aa17.16■□□□□ 0.34
COPS7B-219ENST00000474042 SLC4A2P04920 1241 aa17.15■□□□□ 0.34
COPS7B-219ENST00000474042 GCKRQ14397 625 aa17.15■□□□□ 0.34
COPS7B-219ENST00000474042 DACT2Q5SW24 774 aa17.15■□□□□ 0.34
COPS7B-219ENST00000474042 SAGE1Q9NXZ1 904 aa17.15■□□□□ 0.34
COPS7B-219ENST00000474042 FAM161AQ3B820 660 aa17.14■□□□□ 0.33
COPS7B-219ENST00000474042 MCOLN1Q9GZU1 580 aa17.14■□□□□ 0.33
COPS7B-219ENST00000474042 ECM29Q5VYK3 1845 aa17.13■□□□□ 0.33
COPS7B-219ENST00000474042 ITGA6P23229 1130 aa17.13■□□□□ 0.33
COPS7B-219ENST00000474042 IGHMBP2P38935 993 aaKnown RBP17.13■□□□□ 0.33
COPS7B-219ENST00000474042 ZNF157P51786 506 aaPredicted RBP17.13■□□□□ 0.33
COPS7B-219ENST00000474042 FKBP1BP68106 108 aa17.13■□□□□ 0.33
COPS7B-219ENST00000474042 KIF23Q02241 960 aaPredicted RBP17.13■□□□□ 0.33
COPS7B-219ENST00000474042 RASAL3Q86YV0 1011 aa17.13■□□□□ 0.33
COPS7B-219ENST00000474042 LINS1Q8NG48 757 aa17.13■□□□□ 0.33
COPS7B-219ENST00000474042 DNAAF4Q8WXU2 420 aa17.13■□□□□ 0.33
COPS7B-219ENST00000474042 COA1Q9GZY4 146 aa17.13■□□□□ 0.33
COPS7B-219ENST00000474042 MYH16Q9H6N6 1097 aa17.13■□□□□ 0.33
COPS7B-219ENST00000474042 LEMD3Q9Y2U8 911 aa17.13■□□□□ 0.33
COPS7B-219ENST00000474042 MYO3BQ8WXR4 1341 aa17.13■□□□□ 0.33
COPS7B-219ENST00000474042 CSF1RP07333 972 aa17.12■□□□□ 0.33
COPS7B-219ENST00000474042 FKBP5Q13451 457 aaPredicted RBP17.12■□□□□ 0.33
COPS7B-219ENST00000474042 STRIP1Q5VSL9 837 aa17.12■□□□□ 0.33
COPS7B-219ENST00000474042 TXNRD3Q86VQ6 643 aa17.12■□□□□ 0.33
COPS7B-219ENST00000474042 MXD3Q9BW11 206 aa17.12■□□□□ 0.33
COPS7B-219ENST00000474042 KLRK1P26718 216 aa17.11■□□□□ 0.33
COPS7B-219ENST00000474042 MRS2Q9HD23 443 aa17.11■□□□□ 0.33
COPS7B-219ENST00000474042 ZNF804BA4D1E1 1349 aa17.11■□□□□ 0.33
COPS7B-219ENST00000474042 CCDC85CA6NKD9 419 aa17.1■□□□□ 0.33
COPS7B-219ENST00000474042 VAMP4O75379 141 aa17.1■□□□□ 0.33
COPS7B-219ENST00000474042 RGS19P49795 217 aa17.1■□□□□ 0.33
COPS7B-219ENST00000474042 NBPF9Q3BBW0 867 aa17.1■□□□□ 0.33
COPS7B-219ENST00000474042 WDR63Q8IWG1 891 aa17.1■□□□□ 0.33
COPS7B-219ENST00000474042 ANKRD2Q9GZV1 360 aa17.1■□□□□ 0.33
COPS7B-219ENST00000474042 IRS2Q9Y4H2 1338 aa17.1■□□□□ 0.33
COPS7B-219ENST00000474042 WNT10BO00744 389 aa17.09■□□□□ 0.33
COPS7B-219ENST00000474042 MMP14P50281 582 aa17.09■□□□□ 0.33
COPS7B-219ENST00000474042 RNF186Q9NXI6 227 aa17.09■□□□□ 0.33
COPS7B-219ENST00000474042 LAMB1P07942 1786 aa17.09■□□□□ 0.33
COPS7B-219ENST00000474042 CHRNDQ07001 517 aa17.08■□□□□ 0.32
COPS7B-219ENST00000474042 DGKZQ13574 1117 aa17.08■□□□□ 0.32
COPS7B-219ENST00000474042 OGFOD1Q8N543 542 aa17.08■□□□□ 0.32
COPS7B-219ENST00000474042 CSRNP1Q96S65 589 aa17.08■□□□□ 0.32
COPS7B-219ENST00000474042 MPHOSPH8Q99549 860 aa17.08■□□□□ 0.32
COPS7B-219ENST00000474042 SCAF8Q9UPN6 1271 aaKnown RBP17.08■□□□□ 0.32
COPS7B-219ENST00000474042 ARAP2Q8WZ64 1704 aa17.07■□□□□ 0.32
COPS7B-219ENST00000474042 COL1A1P02452 1464 aaPredicted RBP17.07■□□□□ 0.32
COPS7B-219ENST00000474042 FOXO4P98177 505 aa17.07■□□□□ 0.32
COPS7B-219ENST00000474042 EXOSC9Q06265 439 aaKnown RBP17.07■□□□□ 0.32
COPS7B-219ENST00000474042 REM2Q8IYK8 340 aaPredicted RBP17.07■□□□□ 0.32
COPS7B-219ENST00000474042 FBXW7Q969H0 707 aa17.07■□□□□ 0.32
COPS7B-219ENST00000474042 ZBED3Q96IU2 234 aaPredicted RBP17.07■□□□□ 0.32
COPS7B-219ENST00000474042 ANKRD18BA2A2Z9 1011 aa17.06■□□□□ 0.32
COPS7B-219ENST00000474042 TRPA1O75762 1119 aa17.06■□□□□ 0.32
COPS7B-219ENST00000474042 SASH1O94885 1247 aa17.06■□□□□ 0.32
COPS7B-219ENST00000474042 BEND3Q5T5X7 828 aa17.06■□□□□ 0.32
COPS7B-219ENST00000474042 TTLL5Q6EMB2 1281 aa17.06■□□□□ 0.32
COPS7B-219ENST00000474042 C15orf52Q6ZUT6 534 aaKnown RBP17.06■□□□□ 0.32
COPS7B-219ENST00000474042 MOB2Q70IA6 237 aa17.06■□□□□ 0.32
COPS7B-219ENST00000474042 F6X3S4 739 aa17.05■□□□□ 0.32
COPS7B-219ENST00000474042 PRAMEF18Q5VWM3 479 aa17.05■□□□□ 0.32
COPS7B-219ENST00000474042 KIAA0825Q8IV33 1275 aa17.05■□□□□ 0.32
COPS7B-219ENST00000474042 CD209Q9NNX6 404 aa17.05■□□□□ 0.32
COPS7B-219ENST00000474042 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
COPS7B-219ENST00000474042 UBE2Q2LH0YL09 131 aa17.04■□□□□ 0.32
COPS7B-219ENST00000474042 SNAP23O00161 211 aa17.04■□□□□ 0.32
COPS7B-219ENST00000474042 ANP32CO43423 234 aa17.04■□□□□ 0.32
COPS7B-219ENST00000474042 KCNJ4P48050 445 aa17.04■□□□□ 0.32
COPS7B-219ENST00000474042 GTF2IP78347 998 aa17.04■□□□□ 0.32
COPS7B-219ENST00000474042 APOBEC3FQ8IUX4 373 aaKnown RBP17.04■□□□□ 0.32
COPS7B-219ENST00000474042 HDAC9Q9UKV0 1011 aa17.04■□□□□ 0.32
COPS7B-219ENST00000474042 SALL2Q9Y467 1007 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-219ENST00000474042 SSC5DA1L4H1 1573 aa17.03■□□□□ 0.32
COPS7B-219ENST00000474042 MLLT1Q03111 559 aaPredicted RBP17.03■□□□□ 0.32
COPS7B-219ENST00000474042 IFIT5Q13325 482 aaKnown RBP17.03■□□□□ 0.32
COPS7B-219ENST00000474042 CERS5Q8N5B7 392 aa17.03■□□□□ 0.32
COPS7B-219ENST00000474042 GRM8O00222 908 aa17.02■□□□□ 0.32
COPS7B-219ENST00000474042 TAF5LO75529 589 aa17.02■□□□□ 0.32
COPS7B-219ENST00000474042 NF2P35240 595 aa17.02■□□□□ 0.32
COPS7B-219ENST00000474042 EPHA10Q5JZY3 1008 aa17.02■□□□□ 0.32
COPS7B-219ENST00000474042 MTMR14Q8NCE2 650 aa17.02■□□□□ 0.32
COPS7B-219ENST00000474042 IL1R1P14778 569 aa17.01■□□□□ 0.31
COPS7B-219ENST00000474042 FKBP1AP62942 108 aaKnown RBP17.01■□□□□ 0.31
COPS7B-219ENST00000474042 LMBR1LQ6UX01 489 aa17.01■□□□□ 0.31
COPS7B-219ENST00000474042 HELBQ8NG08 1087 aaPredicted RBP17.01■□□□□ 0.31
COPS7B-219ENST00000474042 CHMP3Q9Y3E7 222 aa17.01■□□□□ 0.31
COPS7B-219ENST00000474042 TTLL12Q14166 644 aaPredicted RBP17■□□□□ 0.31
COPS7B-219ENST00000474042 ZNF804AQ7Z570 1209 aa17■□□□□ 0.31
COPS7B-219ENST00000474042 CTU1Q7Z7A3 348 aaKnown RBP17■□□□□ 0.31
COPS7B-219ENST00000474042 OTOFQ9HC10 1997 aa17■□□□□ 0.31
COPS7B-219ENST00000474042 ALDH1L1O75891 902 aa16.99■□□□□ 0.31
COPS7B-219ENST00000474042 TM4SF4P48230 202 aa16.99■□□□□ 0.31
COPS7B-219ENST00000474042 LDLRAD1Q5T700 205 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms