RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 FOXD4L4Q8WXT5 416 aaPredicted RBP5.24□□□□□ -1.57
CCDC39-203ENST00000473854 RUSC1Q9BVN2 902 aa5.24□□□□□ -1.57
CCDC39-203ENST00000473854 CARD10Q9BWT7 1032 aa5.24□□□□□ -1.57
CCDC39-203ENST00000473854 TM4SF5O14894 197 aa5.23□□□□□ -1.57
CCDC39-203ENST00000473854 RXRBP28702 533 aa5.23□□□□□ -1.57
CCDC39-203ENST00000473854 KRTAP19-4Q3LI73 84 aa5.23□□□□□ -1.57
CCDC39-203ENST00000473854 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
CCDC39-203ENST00000473854 FLCNQ8NFG4 579 aa5.23□□□□□ -1.57
CCDC39-203ENST00000473854 CCER1Q8TC90 406 aaPredicted RBP5.23□□□□□ -1.57
CCDC39-203ENST00000473854 UBASH3BQ8TF42 649 aa5.23□□□□□ -1.57
CCDC39-203ENST00000473854 FNDC3AQ9Y2H6 1198 aaKnown RBP5.23□□□□□ -1.57
CCDC39-203ENST00000473854 USP20Q9Y2K6 914 aa5.23□□□□□ -1.57
CCDC39-203ENST00000473854 MEGF11A6BM72 1044 aa5.22□□□□□ -1.57
CCDC39-203ENST00000473854 H3BRJ5 948 aa5.22□□□□□ -1.57
CCDC39-203ENST00000473854 CYP26A1O43174 497 aa5.22□□□□□ -1.57
CCDC39-203ENST00000473854 F13BP05160 661 aa5.22□□□□□ -1.57
CCDC39-203ENST00000473854 SCNN1AP37088 669 aa5.22□□□□□ -1.57
CCDC39-203ENST00000473854 ARL4DP49703 201 aa5.22□□□□□ -1.57
CCDC39-203ENST00000473854 ATP11AP98196 1134 aa5.22□□□□□ -1.57
CCDC39-203ENST00000473854 DPYDQ12882 1025 aa5.22□□□□□ -1.57
CCDC39-203ENST00000473854 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
CCDC39-203ENST00000473854 TTC39BQ5VTQ0 682 aaPredicted RBP5.22□□□□□ -1.57
CCDC39-203ENST00000473854 PAOXQ6QHF9 649 aa5.22□□□□□ -1.57
CCDC39-203ENST00000473854 FBXL6Q8N531 539 aa5.22□□□□□ -1.57
CCDC39-203ENST00000473854 ADAMTS19Q8TE59 1207 aa5.22□□□□□ -1.57
CCDC39-203ENST00000473854 YIPF2Q9BWQ6 316 aa5.22□□□□□ -1.57
CCDC39-203ENST00000473854 FAM196BA6NMK8 535 aa5.21□□□□□ -1.58
CCDC39-203ENST00000473854 UBAP1LF5GYI3 381 aa5.21□□□□□ -1.58
CCDC39-203ENST00000473854 ADAM11O75078 769 aa5.21□□□□□ -1.58
CCDC39-203ENST00000473854 FARP2O94887 1054 aaPredicted RBP5.21□□□□□ -1.58
CCDC39-203ENST00000473854 KIF4AO95239 1232 aa5.21□□□□□ -1.58
CCDC39-203ENST00000473854 WEE1P30291 646 aa5.21□□□□□ -1.58
CCDC39-203ENST00000473854 CDC25BP30305 580 aa5.21□□□□□ -1.58
CCDC39-203ENST00000473854 PTK7Q13308 1070 aa5.21□□□□□ -1.58
CCDC39-203ENST00000473854 SPOCD1Q6ZMY3 1216 aa5.21□□□□□ -1.58
CCDC39-203ENST00000473854 ANKMY2Q8IV38 441 aa5.21□□□□□ -1.58
CCDC39-203ENST00000473854 PIK3R5Q8WYR1 880 aa5.21□□□□□ -1.58
CCDC39-203ENST00000473854 KLHDC7BQ96G42 594 aa5.21□□□□□ -1.58
CCDC39-203ENST00000473854 PBX4Q9BYU1 374 aa5.21□□□□□ -1.58
CCDC39-203ENST00000473854 ADAM19Q9H013 955 aa5.21□□□□□ -1.58
CCDC39-203ENST00000473854 CYP4F12Q9HCS2 524 aa5.21□□□□□ -1.58
CCDC39-203ENST00000473854 FAM95CA0A1B0GW59 222 aa5.2□□□□□ -1.58
CCDC39-203ENST00000473854 EPHA1P21709 976 aa5.2□□□□□ -1.58
CCDC39-203ENST00000473854 NUTM2GQ5VZR2 741 aa5.2□□□□□ -1.58
CCDC39-203ENST00000473854 RASSF4Q9H2L5 321 aa5.2□□□□□ -1.58
CCDC39-203ENST00000473854 MAFBQ9Y5Q3 323 aaPredicted RBP5.2□□□□□ -1.58
CCDC39-203ENST00000473854 POM121CA8CG34 1229 aa5.19□□□□□ -1.58
CCDC39-203ENST00000473854 DDX3YO15523 660 aaKnown RBP5.19□□□□□ -1.58
CCDC39-203ENST00000473854 EIF4EBP3O60516 100 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-203ENST00000473854 BRD2P25440 801 aaKnown RBP5.19□□□□□ -1.58
CCDC39-203ENST00000473854 CYP27A1Q02318 531 aa5.19□□□□□ -1.58
CCDC39-203ENST00000473854 SGO2Q562F6 1265 aa5.19□□□□□ -1.58
CCDC39-203ENST00000473854 ZNF648Q5T619 568 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-203ENST00000473854 STK11IPQ8N1F8 1099 aa5.19□□□□□ -1.58
CCDC39-203ENST00000473854 SLC38A3Q99624 504 aa5.19□□□□□ -1.58
CCDC39-203ENST00000473854 USP17L15C9J2P7 530 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 USP17L10C9JJH3 530 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 USP17L13C9JLJ4 530 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 USP17L12C9JPN9 530 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 USP17L11C9JVI0 530 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 USP17L21D6R901 530 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 USP17L18D6R9N7 530 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 USP17L22D6RA61 530 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 USP17L17D6RBQ6 530 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 USP17L19D6RCP7 530 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 USP17L20D6RJB6 530 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 PAPLNO95428 1278 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 NLRP12P59046 1061 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 USP17L24Q0WX57 530 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 TRIP4Q15650 581 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-203ENST00000473854 DUSP27Q5VZP5 1158 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 NFXL1Q6ZNB6 911 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 NCAPG2Q86XI2 1143 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 KSR1Q8IVT5 923 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 SMG8Q8ND04 991 aaKnown RBP5.18□□□□□ -1.58
CCDC39-203ENST00000473854 SUGCTQ9HAC7 445 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 PAK6Q9NQU5 681 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-203ENST00000473854 SH2B1Q9NRF2 756 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-203ENST00000473854 LRFN2Q9ULH4 789 aa5.18□□□□□ -1.58
CCDC39-203ENST00000473854 USP11P51784 963 aa5.17□□□□□ -1.58
CCDC39-203ENST00000473854 C19orf57Q0VDD7 668 aa5.17□□□□□ -1.58
CCDC39-203ENST00000473854 NFKBIBQ15653 356 aa5.17□□□□□ -1.58
CCDC39-203ENST00000473854 CRTC2Q53ET0 693 aaPredicted RBP5.17□□□□□ -1.58
CCDC39-203ENST00000473854 COL13A1Q5TAT6 717 aaPredicted RBP5.17□□□□□ -1.58
CCDC39-203ENST00000473854 ZAR1Q86SH2 424 aa5.17□□□□□ -1.58
CCDC39-203ENST00000473854 C12orf50Q8NA57 414 aaPredicted RBP5.17□□□□□ -1.58
CCDC39-203ENST00000473854 TBC1D32Q96NH3 1257 aa5.17□□□□□ -1.58
CCDC39-203ENST00000473854 ABI2Q9NYB9 513 aaPredicted RBP5.17□□□□□ -1.58
CCDC39-203ENST00000473854 TFIP11Q9UBB9 837 aaKnown RBP5.17□□□□□ -1.58
CCDC39-203ENST00000473854 LGR5O75473 907 aa5.16□□□□□ -1.58
CCDC39-203ENST00000473854 CEP120Q8N960 986 aa5.16□□□□□ -1.58
CCDC39-203ENST00000473854 BHLHE22Q8NFJ8 381 aaPredicted RBP5.16□□□□□ -1.58
CCDC39-203ENST00000473854 SLC5A6Q9Y289 635 aa5.16□□□□□ -1.58
CCDC39-203ENST00000473854 A6NJR5 290 aa5.15□□□□□ -1.59
CCDC39-203ENST00000473854 TIAF1O95411 115 aa5.15□□□□□ -1.59
CCDC39-203ENST00000473854 UBTFP17480 764 aaKnown RBP5.15□□□□□ -1.59
CCDC39-203ENST00000473854 COL19A1Q14993 1142 aa5.15□□□□□ -1.59
CCDC39-203ENST00000473854 PLCL1Q15111 1095 aa5.15□□□□□ -1.59
CCDC39-203ENST00000473854 ZNF124Q15973 351 aa5.15□□□□□ -1.59
CCDC39-203ENST00000473854 COX20Q5RI15 118 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms