RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 DBNDD2Q9BQY9 259 aa3.92□□□□□ -1.78
CALD1-216ENST00000473714 PHACTR1Q9C0D0 580 aa3.92□□□□□ -1.78
CALD1-216ENST00000473714 FHOD3Q2V2M9 1422 aa3.92□□□□□ -1.78
CALD1-216ENST00000473714 ACIN1Q9UKV3 1341 aaKnown RBP3.92□□□□□ -1.78
CALD1-216ENST00000473714 RAPGEF2Q9Y4G8 1499 aa3.92□□□□□ -1.78
CALD1-216ENST00000473714 PRR19A6NJB7 356 aa3.91□□□□□ -1.78
CALD1-216ENST00000473714 MAP3K6O95382 1288 aa3.91□□□□□ -1.78
CALD1-216ENST00000473714 EPHA4P54764 986 aa3.91□□□□□ -1.78
CALD1-216ENST00000473714 PSMA6P60900 246 aaKnown RBP3.91□□□□□ -1.78
CALD1-216ENST00000473714 HIF1AQ16665 826 aa3.91□□□□□ -1.78
CALD1-216ENST00000473714 FAM135BQ49AJ0 1406 aa3.91□□□□□ -1.78
CALD1-216ENST00000473714 SUPT6HQ7KZ85 1726 aaKnown RBP3.91□□□□□ -1.78
CALD1-216ENST00000473714 NPM2Q86SE8 214 aaKnown RBP3.91□□□□□ -1.78
CALD1-216ENST00000473714 TRIM42Q8IWZ5 723 aa3.91□□□□□ -1.78
CALD1-216ENST00000473714 AGGF1Q8N302 714 aaeCLIP3.91□□□□□ -1.78
CALD1-216ENST00000473714 UBL7Q96S82 380 aaPredicted RBP3.91□□□□□ -1.78
CALD1-216ENST00000473714 CEP41Q9BYV8 373 aa3.91□□□□□ -1.78
CALD1-216ENST00000473714 C7orf69Q9H7B7 122 aa3.91□□□□□ -1.78
CALD1-216ENST00000473714 SRA1Q9HD15 236 aaKnown RBP3.91□□□□□ -1.78
CALD1-216ENST00000473714 ANGEL1Q9UNK9 670 aaKnown RBP3.91□□□□□ -1.78
CALD1-216ENST00000473714 NOD1Q9Y239 953 aa3.91□□□□□ -1.78
CALD1-216ENST00000473714 CCDC9Q9Y3X0 531 aaKnown RBP3.91□□□□□ -1.78
CALD1-216ENST00000473714 MAGI2Q86UL8 1455 aa3.91□□□□□ -1.78
CALD1-216ENST00000473714 EFCAB5A4FU69 1503 aa3.9□□□□□ -1.78
CALD1-216ENST00000473714 JUNBP17275 347 aaPredicted RBP3.9□□□□□ -1.79
CALD1-216ENST00000473714 ARID4AP29374 1257 aaPredicted RBP3.9□□□□□ -1.79
CALD1-216ENST00000473714 ABL2P42684 1182 aa3.9□□□□□ -1.79
CALD1-216ENST00000473714 PRELPP51888 382 aa3.9□□□□□ -1.79
CALD1-216ENST00000473714 GTF2IP78347 998 aa3.9□□□□□ -1.79
CALD1-216ENST00000473714 MLLT1Q03111 559 aaPredicted RBP3.9□□□□□ -1.79
CALD1-216ENST00000473714 PLAURQ03405 335 aa3.9□□□□□ -1.79
CALD1-216ENST00000473714 EML3Q32P44 896 aa3.9□□□□□ -1.79
CALD1-216ENST00000473714 AEBP1Q8IUX7 1158 aa3.9□□□□□ -1.79
CALD1-216ENST00000473714 MAP4K3Q8IVH8 894 aa3.9□□□□□ -1.79
CALD1-216ENST00000473714 POM121Q96HA1 1249 aa3.9□□□□□ -1.79
CALD1-216ENST00000473714 SMG9Q9H0W8 520 aaKnown RBP3.9□□□□□ -1.79
CALD1-216ENST00000473714 NHSL1Q5SYE7 1610 aa3.9□□□□□ -1.79
CALD1-216ENST00000473714 DENND4BO75064 1496 aaPredicted RBP3.9□□□□□ -1.79
CALD1-216ENST00000473714 ZFYVE16Q7Z3T8 1539 aa3.9□□□□□ -1.79
CALD1-216ENST00000473714 ATAD2Q6PL18 1390 aa3.89□□□□□ -1.79
CALD1-216ENST00000473714 HMX2A2RU54 273 aa3.89□□□□□ -1.79
CALD1-216ENST00000473714 DBX1A6NMT0 343 aa3.89□□□□□ -1.79
CALD1-216ENST00000473714 HIRAP54198 1017 aaPredicted RBP3.89□□□□□ -1.79
CALD1-216ENST00000473714 DHX32Q7L7V1 743 aaKnown RBP3.89□□□□□ -1.79
CALD1-216ENST00000473714 ARMC10Q8N2F6 343 aa3.89□□□□□ -1.79
CALD1-216ENST00000473714 TRPM4Q8TD43 1214 aa3.89□□□□□ -1.79
CALD1-216ENST00000473714 UTP4Q969X6 686 aaKnown RBP3.89□□□□□ -1.79
CALD1-216ENST00000473714 CALR3Q96L12 384 aaKnown RBP3.89□□□□□ -1.79
CALD1-216ENST00000473714 KRTAP17-1Q9BYP8 105 aa3.89□□□□□ -1.79
CALD1-216ENST00000473714 GDPD2Q9HCC8 539 aa3.89□□□□□ -1.79
CALD1-216ENST00000473714 ZMYM4Q5VZL5 1548 aa3.89□□□□□ -1.79
CALD1-216ENST00000473714 RNF17Q9BXT8 1623 aaKnown RBP3.88□□□□□ -1.79
CALD1-216ENST00000473714 RGS12O14924 1447 aa3.88□□□□□ -1.79
CALD1-216ENST00000473714 ZBTB42B2RXF5 422 aa3.88□□□□□ -1.79
CALD1-216ENST00000473714 PDE4CQ08493 712 aa3.88□□□□□ -1.79
CALD1-216ENST00000473714 SEMA3FQ13275 785 aa3.88□□□□□ -1.79
CALD1-216ENST00000473714 SETDB1Q15047 1291 aa3.88□□□□□ -1.79
CALD1-216ENST00000473714 UVSSAQ2YD98 709 aa3.88□□□□□ -1.79
CALD1-216ENST00000473714 GDF6Q6KF10 455 aaPredicted RBP3.88□□□□□ -1.79
CALD1-216ENST00000473714 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.88□□□□□ -1.79
CALD1-216ENST00000473714 CLEC10AQ8IUN9 316 aa3.88□□□□□ -1.79
CALD1-216ENST00000473714 IL22RA1Q8N6P7 574 aa3.88□□□□□ -1.79
CALD1-216ENST00000473714 SHKBP1Q8TBC3 707 aa3.88□□□□□ -1.79
CALD1-216ENST00000473714 COG6Q9Y2V7 657 aa3.88□□□□□ -1.79
CALD1-216ENST00000473714 JCADQ9P266 1359 aa3.88□□□□□ -1.79
CALD1-216ENST00000473714 NPATQ14207 1427 aa3.87□□□□□ -1.79
CALD1-216ENST00000473714 ATP10AO60312 1499 aa3.87□□□□□ -1.79
CALD1-216ENST00000473714 WDR64B1ANS9 1081 aa3.87□□□□□ -1.79
CALD1-216ENST00000473714 LZTS3O60299 673 aaPredicted RBP3.87□□□□□ -1.79
CALD1-216ENST00000473714 EPB42P16452 691 aa3.87□□□□□ -1.79
CALD1-216ENST00000473714 EIF2AK2P19525 551 aaKnown RBP3.87□□□□□ -1.79
CALD1-216ENST00000473714 RBM6P78332 1123 aaKnown RBP3.87□□□□□ -1.79
CALD1-216ENST00000473714 GPLD1P80108 840 aa3.87□□□□□ -1.79
CALD1-216ENST00000473714 ZNF124Q15973 351 aa3.87□□□□□ -1.79
CALD1-216ENST00000473714 ZNF648Q5T619 568 aaPredicted RBP3.87□□□□□ -1.79
CALD1-216ENST00000473714 SPOCD1Q6ZMY3 1216 aa3.87□□□□□ -1.79
CALD1-216ENST00000473714 HFE2Q6ZVN8 426 aa3.87□□□□□ -1.79
CALD1-216ENST00000473714 KRT25Q7Z3Z0 450 aa3.87□□□□□ -1.79
CALD1-216ENST00000473714 TP53INP2Q8IXH6 220 aa3.87□□□□□ -1.79
CALD1-216ENST00000473714 ALDH16A1Q8IZ83 802 aa3.87□□□□□ -1.79
CALD1-216ENST00000473714 FBXL18Q96ME1 805 aa3.87□□□□□ -1.79
CALD1-216ENST00000473714 ABCA9Q8IUA7 1624 aa3.87□□□□□ -1.79
CALD1-216ENST00000473714 STRCP1A6NGW2 1772 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 VWDEQ8N2E2 1590 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 ITGB5P18084 799 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 TARSP26639 723 aaKnown RBP3.86□□□□□ -1.79
CALD1-216ENST00000473714 NCOA4Q13772 614 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 PKN1Q16512 942 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 IER5Q5VY09 327 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 CBLL1Q75N03 491 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 DEPDC4Q8N2C3 294 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 GIMAP7Q8NHV1 300 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 PLD4Q96BZ4 506 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 FAM83CQ9BQN1 747 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 MUC3BQ9H195 1237 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 TSPAN10Q9H1Z9 355 aaPredicted RBP3.86□□□□□ -1.79
CALD1-216ENST00000473714 PIM2Q9P1W9 311 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 KIAA1024Q9UPX6 916 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 SPATA31A6Q5VVP1 1343 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 WRNQ14191 1432 aaPredicted RBP eCLIP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms