RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 TXNRD3Q86VQ6 643 aa23.93■■□□□ 1.42
CCDC88B-206ENST00000473405 GGA3Q9NZ52 723 aa23.93■■□□□ 1.42
CCDC88B-206ENST00000473405 AOC2O75106 756 aa23.92■■□□□ 1.42
CCDC88B-206ENST00000473405 FOXO4P98177 505 aa23.92■■□□□ 1.42
CCDC88B-206ENST00000473405 HSPA8P11142 646 aaKnown RBP23.91■■□□□ 1.42
CCDC88B-206ENST00000473405 KLRK1P26718 216 aa23.91■■□□□ 1.42
CCDC88B-206ENST00000473405 LBX1P52954 281 aa23.91■■□□□ 1.42
CCDC88B-206ENST00000473405 DCPSQ96C86 337 aaKnown RBP23.91■■□□□ 1.42
CCDC88B-206ENST00000473405 LEMD3Q9Y2U8 911 aa23.91■■□□□ 1.42
CCDC88B-206ENST00000473405 MPHOSPH8Q99549 860 aa23.9■■□□□ 1.42
CCDC88B-206ENST00000473405 ZNF804BA4D1E1 1349 aa23.89■■□□□ 1.42
CCDC88B-206ENST00000473405 USP17L8P0C7I0 530 aa23.89■■□□□ 1.41
CCDC88B-206ENST00000473405 DACT2Q5SW24 774 aa23.89■■□□□ 1.41
CCDC88B-206ENST00000473405 MXD3Q9BW11 206 aa23.89■■□□□ 1.41
CCDC88B-206ENST00000473405 ANKRD2Q9GZV1 360 aa23.89■■□□□ 1.41
CCDC88B-206ENST00000473405 COA1Q9GZY4 146 aa23.89■■□□□ 1.41
CCDC88B-206ENST00000473405 ANKRD18BA2A2Z9 1011 aa23.88■■□□□ 1.41
CCDC88B-206ENST00000473405 CAPN15O75808 1086 aa23.88■■□□□ 1.41
CCDC88B-206ENST00000473405 MAP2K2P36507 400 aa23.88■■□□□ 1.41
CCDC88B-206ENST00000473405 CHRNDQ07001 517 aa23.88■■□□□ 1.41
CCDC88B-206ENST00000473405 EPHA10Q5JZY3 1008 aa23.88■■□□□ 1.41
CCDC88B-206ENST00000473405 MYOZ2Q9NPC6 264 aa23.88■■□□□ 1.41
CCDC88B-206ENST00000473405 IRS2Q9Y4H2 1338 aa23.87■■□□□ 1.41
CCDC88B-206ENST00000473405 GRM8O00222 908 aa23.87■■□□□ 1.41
CCDC88B-206ENST00000473405 HUNKP57058 714 aa23.87■■□□□ 1.41
CCDC88B-206ENST00000473405 SCARF1Q14162 830 aa23.87■■□□□ 1.41
CCDC88B-206ENST00000473405 ANGEL2Q5VTE6 544 aaKnown RBP23.87■■□□□ 1.41
CCDC88B-206ENST00000473405 SULF1Q8IWU6 871 aa23.86■■□□□ 1.41
CCDC88B-206ENST00000473405 GBA2Q9HCG7 927 aaPredicted RBP23.86■■□□□ 1.41
CCDC88B-206ENST00000473405 SNAP23O00161 211 aa23.85■■□□□ 1.41
CCDC88B-206ENST00000473405 IFIT5Q13325 482 aaKnown RBP23.85■■□□□ 1.41
CCDC88B-206ENST00000473405 STRIP1Q5VSL9 837 aa23.85■■□□□ 1.41
CCDC88B-206ENST00000473405 LMBR1LQ6UX01 489 aa23.85■■□□□ 1.41
CCDC88B-206ENST00000473405 PAPPA2Q9BXP8 1791 aa23.85■■□□□ 1.41
CCDC88B-206ENST00000473405 ALDH1L1O75891 902 aa23.84■■□□□ 1.41
CCDC88B-206ENST00000473405 SLC4A10Q6U841 1118 aa23.84■■□□□ 1.41
CCDC88B-206ENST00000473405 CDCA5Q96FF9 252 aa23.84■■□□□ 1.41
CCDC88B-206ENST00000473405 CHMP3Q9Y3E7 222 aa23.84■■□□□ 1.41
CCDC88B-206ENST00000473405 MYO3BQ8WXR4 1341 aa23.84■■□□□ 1.41
CCDC88B-206ENST00000473405 PITPNM2Q9BZ72 1349 aa23.84■■□□□ 1.41
CCDC88B-206ENST00000473405 TAF5LO75529 589 aa23.83■■□□□ 1.41
CCDC88B-206ENST00000473405 BRPF1P55201 1214 aaPredicted RBP23.83■■□□□ 1.41
CCDC88B-206ENST00000473405 FBXW7Q969H0 707 aa23.83■■□□□ 1.41
CCDC88B-206ENST00000473405 BEGAINQ9BUH8 593 aa23.83■■□□□ 1.41
CCDC88B-206ENST00000473405 ECM29Q5VYK3 1845 aa23.82■■□□□ 1.4
CCDC88B-206ENST00000473405 KCNJ4P48050 445 aa23.82■■□□□ 1.4
CCDC88B-206ENST00000473405 C2orf69Q8N8R5 385 aa23.82■■□□□ 1.4
CCDC88B-206ENST00000473405 HELBQ8NG08 1087 aaPredicted RBP23.82■■□□□ 1.4
CCDC88B-206ENST00000473405 ZIC5Q96T25 663 aa23.82■■□□□ 1.4
CCDC88B-206ENST00000473405 SRCIN1Q9C0H9 1055 aa23.82■■□□□ 1.4
CCDC88B-206ENST00000473405 C9orf78Q9NZ63 289 aaPredicted RBP23.82■■□□□ 1.4
CCDC88B-206ENST00000473405 FAM155AB1AL88 458 aaPredicted RBP23.81■■□□□ 1.4
CCDC88B-206ENST00000473405 NOGQ13253 232 aa23.81■■□□□ 1.4
CCDC88B-206ENST00000473405 NBPF9Q3BBW0 867 aa23.81■■□□□ 1.4
CCDC88B-206ENST00000473405 C15orf52Q6ZUT6 534 aaKnown RBP23.81■■□□□ 1.4
CCDC88B-206ENST00000473405 MRPL50Q8N5N7 158 aaKnown RBP23.81■■□□□ 1.4
CCDC88B-206ENST00000473405 KAZALD1Q96I82 304 aa23.81■■□□□ 1.4
CCDC88B-206ENST00000473405 ZNF594Q96JF6 807 aaPredicted RBP23.81■■□□□ 1.4
CCDC88B-206ENST00000473405 E9PSI1 815 aa23.8■■□□□ 1.4
CCDC88B-206ENST00000473405 TTLL5Q6EMB2 1281 aa23.8■■□□□ 1.4
CCDC88B-206ENST00000473405 RGMBQ6NW40 437 aa23.8■■□□□ 1.4
CCDC88B-206ENST00000473405 CD209Q9NNX6 404 aa23.8■■□□□ 1.4
CCDC88B-206ENST00000473405 TSKSQ9UJT2 592 aa23.8■■□□□ 1.4
CCDC88B-206ENST00000473405 SCAF8Q9UPN6 1271 aaKnown RBP23.8■■□□□ 1.4
CCDC88B-206ENST00000473405 UTYO14607 1347 aa23.8■■□□□ 1.4
CCDC88B-206ENST00000473405 ARAP2Q8WZ64 1704 aa23.79■■□□□ 1.4
CCDC88B-206ENST00000473405 NBPF7P0C2Y1 421 aaPredicted RBP23.79■■□□□ 1.4
CCDC88B-206ENST00000473405 CCDC57Q2TAC2 916 aa23.79■■□□□ 1.4
CCDC88B-206ENST00000473405 OGFOD1Q8N543 542 aa23.79■■□□□ 1.4
CCDC88B-206ENST00000473405 SUCLG2Q96I99 432 aa23.79■■□□□ 1.4
CCDC88B-206ENST00000473405 WNT10BO00744 389 aa23.78■■□□□ 1.4
CCDC88B-206ENST00000473405 GTF2IP78347 998 aa23.78■■□□□ 1.4
CCDC88B-206ENST00000473405 SLFN5Q08AF3 891 aa23.78■■□□□ 1.4
CCDC88B-206ENST00000473405 CA12O43570 354 aa23.77■■□□□ 1.4
CCDC88B-206ENST00000473405 SASH1O94885 1247 aa23.77■■□□□ 1.4
CCDC88B-206ENST00000473405 LDHAL6AQ6ZMR3 332 aa23.77■■□□□ 1.4
CCDC88B-206ENST00000473405 KIAA0825Q8IV33 1275 aa23.77■■□□□ 1.4
CCDC88B-206ENST00000473405 SSH1Q8WYL5 1049 aa23.77■■□□□ 1.4
CCDC88B-206ENST00000473405 CASP8AP2Q9UKL3 1982 aa23.77■■□□□ 1.4
CCDC88B-206ENST00000473405 AKAP11Q9UKA4 1901 aa23.76■■□□□ 1.39
CCDC88B-206ENST00000473405 MMP14P50281 582 aa23.76■■□□□ 1.39
CCDC88B-206ENST00000473405 CERS5Q8N5B7 392 aa23.76■■□□□ 1.39
CCDC88B-206ENST00000473405 PTPRCP08575 1304 aa23.76■■□□□ 1.39
CCDC88B-206ENST00000473405 IL1R1P14778 569 aa23.75■■□□□ 1.39
CCDC88B-206ENST00000473405 ZNF157P51786 506 aaPredicted RBP23.75■■□□□ 1.39
CCDC88B-206ENST00000473405 TAF7LQ5H9L4 462 aa23.75■■□□□ 1.39
CCDC88B-206ENST00000473405 CCDC102AQ96A19 550 aa23.75■■□□□ 1.39
CCDC88B-206ENST00000473405 ZBED3Q96IU2 234 aaPredicted RBP23.75■■□□□ 1.39
CCDC88B-206ENST00000473405 SLC10A3P09131 477 aa23.74■■□□□ 1.39
CCDC88B-206ENST00000473405 ZNF804AQ7Z570 1209 aa23.74■■□□□ 1.39
CCDC88B-206ENST00000473405 CDCA7LQ96GN5 454 aa23.74■■□□□ 1.39
CCDC88B-206ENST00000473405 CNNM1Q9NRU3 951 aa23.74■■□□□ 1.39
CCDC88B-206ENST00000473405 FKBP1BP68106 108 aa23.73■■□□□ 1.39
CCDC88B-206ENST00000473405 RABL6Q3YEC7 729 aaPredicted RBP23.73■■□□□ 1.39
CCDC88B-206ENST00000473405 PRAMEF18Q5VWM3 479 aa23.73■■□□□ 1.39
CCDC88B-206ENST00000473405 ANKRD44Q8N8A2 993 aa23.73■■□□□ 1.39
CCDC88B-206ENST00000473405 PUS3Q9BZE2 481 aaKnown RBP23.73■■□□□ 1.39
CCDC88B-206ENST00000473405 BICC1Q9H694 974 aaKnown RBP23.73■■□□□ 1.39
CCDC88B-206ENST00000473405 PLIN1O60240 522 aa23.72■■□□□ 1.39
CCDC88B-206ENST00000473405 KIF23Q02241 960 aaPredicted RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms