RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 MPHOSPH8Q99549 860 aa21.2■□□□□ 0.98
USP40-212ENST00000473191 CHMP3Q9Y3E7 222 aa21.2■□□□□ 0.98
USP40-212ENST00000473191 USP17L3A6NCW0 530 aa21.19■□□□□ 0.98
USP40-212ENST00000473191 USP17L4A6NCW7 530 aa21.19■□□□□ 0.98
USP40-212ENST00000473191 GRM8O00222 908 aa21.19■□□□□ 0.98
USP40-212ENST00000473191 ZNF280AP59817 542 aaPredicted RBP21.19■□□□□ 0.98
USP40-212ENST00000473191 LMBR1LQ6UX01 489 aa21.19■□□□□ 0.98
USP40-212ENST00000473191 USP17L1Q7RTZ2 530 aa21.19■□□□□ 0.98
USP40-212ENST00000473191 KRT26Q7Z3Y9 468 aa21.19■□□□□ 0.98
USP40-212ENST00000473191 PODNQ7Z5L7 613 aa21.19■□□□□ 0.98
USP40-212ENST00000473191 GGA3Q9NZ52 723 aa21.19■□□□□ 0.98
USP40-212ENST00000473191 ZNF804BA4D1E1 1349 aa21.19■□□□□ 0.98
USP40-212ENST00000473191 ANKRD18BA2A2Z9 1011 aa21.18■□□□□ 0.98
USP40-212ENST00000473191 DACT2Q5SW24 774 aa21.18■□□□□ 0.98
USP40-212ENST00000473191 TNS4Q8IZW8 715 aa21.18■□□□□ 0.98
USP40-212ENST00000473191 AGBL3Q8NEM8 1001 aa21.18■□□□□ 0.98
USP40-212ENST00000473191 KAZALD1Q96I82 304 aa21.18■□□□□ 0.98
USP40-212ENST00000473191 LEMD3Q9Y2U8 911 aa21.18■□□□□ 0.98
USP40-212ENST00000473191 IRS2Q9Y4H2 1338 aa21.18■□□□□ 0.98
USP40-212ENST00000473191 ZNF609O15014 1411 aa21.18■□□□□ 0.98
USP40-212ENST00000473191 SLFN5Q08AF3 891 aa21.17■□□□□ 0.98
USP40-212ENST00000473191 FBXW7Q969H0 707 aa21.17■□□□□ 0.98
USP40-212ENST00000473191 SUCLG2Q96I99 432 aa21.17■□□□□ 0.98
USP40-212ENST00000473191 NBPF7P0C2Y1 421 aaPredicted RBP21.16■□□□□ 0.98
USP40-212ENST00000473191 LBX1P52954 281 aa21.16■□□□□ 0.98
USP40-212ENST00000473191 IFIT5Q13325 482 aaKnown RBP21.16■□□□□ 0.98
USP40-212ENST00000473191 SCARF1Q14162 830 aa21.16■□□□□ 0.98
USP40-212ENST00000473191 ANGEL2Q5VTE6 544 aaKnown RBP21.16■□□□□ 0.98
USP40-212ENST00000473191 SSH1Q8WYL5 1049 aa21.16■□□□□ 0.98
USP40-212ENST00000473191 DCPSQ96C86 337 aaKnown RBP21.16■□□□□ 0.98
USP40-212ENST00000473191 ZIC5Q96T25 663 aa21.16■□□□□ 0.98
USP40-212ENST00000473191 SRCIN1Q9C0H9 1055 aa21.16■□□□□ 0.98
USP40-212ENST00000473191 CAPN15O75808 1086 aa21.15■□□□□ 0.98
USP40-212ENST00000473191 USP17L8P0C7I0 530 aa21.15■□□□□ 0.98
USP40-212ENST00000473191 ANKRD2Q9GZV1 360 aa21.15■□□□□ 0.98
USP40-212ENST00000473191 COA1Q9GZY4 146 aa21.15■□□□□ 0.98
USP40-212ENST00000473191 MYOZ2Q9NPC6 264 aa21.15■□□□□ 0.98
USP40-212ENST00000473191 C9orf78Q9NZ63 289 aaPredicted RBP21.15■□□□□ 0.98
USP40-212ENST00000473191 E9PSI1 815 aa21.14■□□□□ 0.97
USP40-212ENST00000473191 ALDH1L1O75891 902 aa21.14■□□□□ 0.97
USP40-212ENST00000473191 HSPA8P11142 646 aaKnown RBP21.14■□□□□ 0.97
USP40-212ENST00000473191 AIDAQ96BJ3 306 aa21.14■□□□□ 0.97
USP40-212ENST00000473191 ECE1P42892 770 aa21.13■□□□□ 0.97
USP40-212ENST00000473191 NBPF9Q3BBW0 867 aa21.13■□□□□ 0.97
USP40-212ENST00000473191 TSKSQ9UJT2 592 aa21.13■□□□□ 0.97
USP40-212ENST00000473191 PLIN1O60240 522 aa21.12■□□□□ 0.97
USP40-212ENST00000473191 KCNJ4P48050 445 aa21.12■□□□□ 0.97
USP40-212ENST00000473191 CTCFP49711 727 aaPredicted RBP21.12■□□□□ 0.97
USP40-212ENST00000473191 GTF2IP78347 998 aa21.12■□□□□ 0.97
USP40-212ENST00000473191 STRIP1Q5VSL9 837 aa21.12■□□□□ 0.97
USP40-212ENST00000473191 PUS3Q9BZE2 481 aaKnown RBP21.12■□□□□ 0.97
USP40-212ENST00000473191 CD209Q9NNX6 404 aa21.12■□□□□ 0.97
USP40-212ENST00000473191 HUNKP57058 714 aa21.11■□□□□ 0.97
USP40-212ENST00000473191 MAP2K1Q02750 393 aaPredicted RBP21.11■□□□□ 0.97
USP40-212ENST00000473191 CCDC57Q2TAC2 916 aa21.11■□□□□ 0.97
USP40-212ENST00000473191 PRAMEF18Q5VWM3 479 aa21.11■□□□□ 0.97
USP40-212ENST00000473191 TTLL5Q6EMB2 1281 aa21.11■□□□□ 0.97
USP40-212ENST00000473191 CDCA5Q96FF9 252 aa21.11■□□□□ 0.97
USP40-212ENST00000473191 GBA2Q9HCG7 927 aaPredicted RBP21.11■□□□□ 0.97
USP40-212ENST00000473191 UTYO14607 1347 aa21.1■□□□□ 0.97
USP40-212ENST00000473191 LDHAL6AQ6ZMR3 332 aa21.1■□□□□ 0.97
USP40-212ENST00000473191 KIAA0825Q8IV33 1275 aa21.1■□□□□ 0.97
USP40-212ENST00000473191 SULF1Q8IWU6 871 aa21.1■□□□□ 0.97
USP40-212ENST00000473191 TRMT2AQ8IZ69 625 aaKnown RBP21.1■□□□□ 0.97
USP40-212ENST00000473191 CERS5Q8N5B7 392 aa21.1■□□□□ 0.97
USP40-212ENST00000473191 HHIPL1Q96JK4 782 aa21.1■□□□□ 0.97
USP40-212ENST00000473191 BICC1Q9H694 974 aaKnown RBP21.1■□□□□ 0.97
USP40-212ENST00000473191 JAG2Q9Y219 1238 aa21.1■□□□□ 0.97
USP40-212ENST00000473191 WNT10BO00744 389 aa21.09■□□□□ 0.97
USP40-212ENST00000473191 SASH1O94885 1247 aa21.09■□□□□ 0.97
USP40-212ENST00000473191 PRDM10Q9NQV6 1147 aa21.09■□□□□ 0.97
USP40-212ENST00000473191 PCDHAC2Q9Y5I4 1007 aa21.09■□□□□ 0.97
USP40-212ENST00000473191 FAM155AB1AL88 458 aaPredicted RBP21.08■□□□□ 0.97
USP40-212ENST00000473191 TAF7LQ5H9L4 462 aa21.08■□□□□ 0.97
USP40-212ENST00000473191 MOB2Q70IA6 237 aa21.08■□□□□ 0.97
USP40-212ENST00000473191 ANKRD44Q8N8A2 993 aa21.08■□□□□ 0.97
USP40-212ENST00000473191 CNNM1Q9NRU3 951 aa21.08■□□□□ 0.97
USP40-212ENST00000473191 MAP2K2P36507 400 aa21.07■□□□□ 0.96
USP40-212ENST00000473191 C15orf52Q6ZUT6 534 aaKnown RBP21.07■□□□□ 0.96
USP40-212ENST00000473191 PTPRCP08575 1304 aa21.06■□□□□ 0.96
USP40-212ENST00000473191 C2orf69Q8N8R5 385 aa21.06■□□□□ 0.96
USP40-212ENST00000473191 KLHDC4Q8TBB5 520 aa21.06■□□□□ 0.96
USP40-212ENST00000473191 USP44Q9H0E7 712 aa21.06■□□□□ 0.96
USP40-212ENST00000473191 MYO3BQ8WXR4 1341 aa21.05■□□□□ 0.96
USP40-212ENST00000473191 CCER2I3L3R5 266 aa21.05■□□□□ 0.96
USP40-212ENST00000473191 RABL6Q3YEC7 729 aaPredicted RBP21.05■□□□□ 0.96
USP40-212ENST00000473191 LRRC24Q50LG9 513 aa21.05■□□□□ 0.96
USP40-212ENST00000473191 RGMBQ6NW40 437 aa21.05■□□□□ 0.96
USP40-212ENST00000473191 RIPOR2Q9Y4F9 1068 aa21.05■□□□□ 0.96
USP40-212ENST00000473191 AOX1Q06278 1338 aa21.04■□□□□ 0.96
USP40-212ENST00000473191 PITPNM2Q9BZ72 1349 aa21.04■□□□□ 0.96
USP40-212ENST00000473191 F8W031 263 aaPredicted RBP21.04■□□□□ 0.96
USP40-212ENST00000473191 IL1R1P14778 569 aa21.04■□□□□ 0.96
USP40-212ENST00000473191 OGFOD1Q8N543 542 aa21.04■□□□□ 0.96
USP40-212ENST00000473191 ZBED3Q96IU2 234 aaPredicted RBP21.04■□□□□ 0.96
USP40-212ENST00000473191 SMC4Q9NTJ3 1288 aa21.04■□□□□ 0.96
USP40-212ENST00000473191 GYG1P46976 350 aa21.03■□□□□ 0.96
USP40-212ENST00000473191 ALDH1L2Q3SY69 923 aa21.03■□□□□ 0.96
USP40-212ENST00000473191 ZNF157P51786 506 aaPredicted RBP21.02■□□□□ 0.96
USP40-212ENST00000473191 BRPF1P55201 1214 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms