RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 GGA1Q9UJY5 639 aa16.44■□□□□ 0.22
TPM3-216ENST00000473036 ZNF646O15015 1829 aaPredicted RBP16.44■□□□□ 0.22
TPM3-216ENST00000473036 DOK7Q18PE1 504 aa16.43■□□□□ 0.22
TPM3-216ENST00000473036 WASHC4Q2M389 1173 aa16.43■□□□□ 0.22
TPM3-216ENST00000473036 LDHAL6AQ6ZMR3 332 aa16.43■□□□□ 0.22
TPM3-216ENST00000473036 ITPRIPQ8IWB1 547 aa16.43■□□□□ 0.22
TPM3-216ENST00000473036 DBNDD1Q9H9R9 158 aa16.43■□□□□ 0.22
TPM3-216ENST00000473036 GNAI3P08754 354 aa16.42■□□□□ 0.22
TPM3-216ENST00000473036 ATP2B4P23634 1241 aa16.42■□□□□ 0.22
TPM3-216ENST00000473036 ECE1P42892 770 aa16.42■□□□□ 0.22
TPM3-216ENST00000473036 LBX1P52954 281 aa16.42■□□□□ 0.22
TPM3-216ENST00000473036 PA2G4Q9UQ80 394 aaKnown RBP16.42■□□□□ 0.22
TPM3-216ENST00000473036 COG6Q9Y2V7 657 aa16.42■□□□□ 0.22
TPM3-216ENST00000473036 WDR33Q9C0J8 1336 aaKnown RBP16.42■□□□□ 0.22
TPM3-216ENST00000473036 PNMA6EA0A0J9YXQ4 647 aa16.41■□□□□ 0.22
TPM3-216ENST00000473036 GNAI2P04899 355 aa16.41■□□□□ 0.22
TPM3-216ENST00000473036 LMOD1P29536 600 aaPredicted RBP16.41■□□□□ 0.22
TPM3-216ENST00000473036 EIF6P56537 245 aaKnown RBP16.41■□□□□ 0.22
TPM3-216ENST00000473036 CXCL9Q07325 125 aa16.41■□□□□ 0.22
TPM3-216ENST00000473036 MTX1Q13505 466 aa16.41■□□□□ 0.22
TPM3-216ENST00000473036 ATG9AQ7Z3C6 839 aa16.41■□□□□ 0.22
TPM3-216ENST00000473036 NIM1KQ8IY84 436 aa16.41■□□□□ 0.22
TPM3-216ENST00000473036 VGLL2Q8N8G2 317 aa16.41■□□□□ 0.22
TPM3-216ENST00000473036 CNNM1Q9NRU3 951 aa16.41■□□□□ 0.22
TPM3-216ENST00000473036 ZNRF3Q9ULT6 936 aa16.41■□□□□ 0.22
TPM3-216ENST00000473036 ZNF804BA4D1E1 1349 aa16.41■□□□□ 0.22
TPM3-216ENST00000473036 HSPA8P11142 646 aaKnown RBP16.4■□□□□ 0.22
TPM3-216ENST00000473036 MVPQ14764 893 aaKnown RBP16.4■□□□□ 0.22
TPM3-216ENST00000473036 TAF7LQ5H9L4 462 aa16.4■□□□□ 0.22
TPM3-216ENST00000473036 ANKRD2Q9GZV1 360 aa16.4■□□□□ 0.22
TPM3-216ENST00000473036 LEMD3Q9Y2U8 911 aa16.4■□□□□ 0.22
TPM3-216ENST00000473036 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.4■□□□□ 0.22
TPM3-216ENST00000473036 THSD7BQ9C0I4 1608 aa16.4■□□□□ 0.22
TPM3-216ENST00000473036 PSME4Q14997 1843 aa16.4■□□□□ 0.22
TPM3-216ENST00000473036 MED23Q9ULK4 1368 aa16.39■□□□□ 0.21
TPM3-216ENST00000473036 ECE2O60344 883 aa16.39■□□□□ 0.21
TPM3-216ENST00000473036 RAD17O75943 681 aa16.39■□□□□ 0.21
TPM3-216ENST00000473036 SLC34A2O95436 690 aa16.39■□□□□ 0.21
TPM3-216ENST00000473036 USP50Q70EL3 339 aaPredicted RBP16.39■□□□□ 0.21
TPM3-216ENST00000473036 ABHD8Q96I13 439 aa16.39■□□□□ 0.21
TPM3-216ENST00000473036 BEGAINQ9BUH8 593 aa16.39■□□□□ 0.21
TPM3-216ENST00000473036 ZC3H12CQ9C0D7 883 aaKnown RBP16.39■□□□□ 0.21
TPM3-216ENST00000473036 ABT1Q9ULW3 272 aaKnown RBP16.39■□□□□ 0.21
TPM3-216ENST00000473036 EYA2O00167 538 aa16.38■□□□□ 0.21
TPM3-216ENST00000473036 SRGAP3O43295 1099 aa16.38■□□□□ 0.21
TPM3-216ENST00000473036 MAP1SQ66K74 1059 aaPredicted RBP16.38■□□□□ 0.21
TPM3-216ENST00000473036 EYA3Q99504 573 aa16.38■□□□□ 0.21
TPM3-216ENST00000473036 SIL1Q9H173 461 aa16.38■□□□□ 0.21
TPM3-216ENST00000473036 COPRSQ9NQ92 184 aa16.38■□□□□ 0.21
TPM3-216ENST00000473036 SHTN1A0MZ66 631 aa16.37■□□□□ 0.21
TPM3-216ENST00000473036 CA12O43570 354 aa16.37■□□□□ 0.21
TPM3-216ENST00000473036 SCNN1DP51172 638 aa16.37■□□□□ 0.21
TPM3-216ENST00000473036 RRP1P56182 461 aaKnown RBP16.37■□□□□ 0.21
TPM3-216ENST00000473036 PDE3AQ14432 1141 aa16.37■□□□□ 0.21
TPM3-216ENST00000473036 ZBTB40Q9NUA8 1239 aa16.37■□□□□ 0.21
TPM3-216ENST00000473036 GJA3Q9Y6H8 435 aa16.37■□□□□ 0.21
TPM3-216ENST00000473036 PSMD14O00487 310 aa16.36■□□□□ 0.21
TPM3-216ENST00000473036 MAP2K2P36507 400 aa16.36■□□□□ 0.21
TPM3-216ENST00000473036 ATP8B2P98198 1209 aa16.36■□□□□ 0.21
TPM3-216ENST00000473036 POLA2Q14181 598 aa16.36■□□□□ 0.21
TPM3-216ENST00000473036 C15orf52Q6ZUT6 534 aaKnown RBP16.36■□□□□ 0.21
TPM3-216ENST00000473036 MROH5Q6ZUA9 1318 aa16.36■□□□□ 0.21
TPM3-216ENST00000473036 PDE8BO95263 885 aa16.35■□□□□ 0.21
TPM3-216ENST00000473036 FGFR2P21802 821 aa16.35■□□□□ 0.21
TPM3-216ENST00000473036 RGS19P49795 217 aa16.35■□□□□ 0.21
TPM3-216ENST00000473036 METTL24Q5JXM2 366 aa16.35■□□□□ 0.21
TPM3-216ENST00000473036 CEP85Q6P2H3 762 aa16.35■□□□□ 0.21
TPM3-216ENST00000473036 SIRT2Q8IXJ6 389 aa16.35■□□□□ 0.21
TPM3-216ENST00000473036 SSH3Q8TE77 659 aa16.35■□□□□ 0.21
TPM3-216ENST00000473036 HHIPL1Q96JK4 782 aa16.35■□□□□ 0.21
TPM3-216ENST00000473036 CAPNS2Q96L46 248 aa16.35■□□□□ 0.21
TPM3-216ENST00000473036 ZBTB12Q9Y330 459 aaPredicted RBP16.35■□□□□ 0.21
TPM3-216ENST00000473036 CIAO1O76071 339 aa16.34■□□□□ 0.21
TPM3-216ENST00000473036 MS4A1P11836 297 aa16.34■□□□□ 0.21
TPM3-216ENST00000473036 CIAPIN1Q6FI81 312 aa16.34■□□□□ 0.21
TPM3-216ENST00000473036 FAM84BQ96KN1 310 aaPredicted RBP16.34■□□□□ 0.21
TPM3-216ENST00000473036 MXD3Q9BW11 206 aa16.34■□□□□ 0.21
TPM3-216ENST00000473036 HDAC5Q9UQL6 1122 aa16.34■□□□□ 0.21
TPM3-216ENST00000473036 EPS15P42566 896 aa16.33■□□□□ 0.2
TPM3-216ENST00000473036 KCNJ4P48050 445 aa16.33■□□□□ 0.2
TPM3-216ENST00000473036 GMPSP49915 693 aaPredicted RBP16.33■□□□□ 0.2
TPM3-216ENST00000473036 UBE4AQ14139 1066 aa16.33■□□□□ 0.2
TPM3-216ENST00000473036 CD209Q9NNX6 404 aa16.33■□□□□ 0.2
TPM3-216ENST00000473036 DDX19BQ9UMR2 479 aa16.33■□□□□ 0.2
TPM3-216ENST00000473036 TLL2Q9Y6L7 1015 aa16.33■□□□□ 0.2
TPM3-216ENST00000473036 VIL1P09327 827 aaKnown RBP16.32■□□□□ 0.2
TPM3-216ENST00000473036 GYG1P46976 350 aa16.32■□□□□ 0.2
TPM3-216ENST00000473036 PODNQ7Z5L7 613 aa16.32■□□□□ 0.2
TPM3-216ENST00000473036 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.32■□□□□ 0.2
TPM3-216ENST00000473036 COA1Q9GZY4 146 aa16.32■□□□□ 0.2
TPM3-216ENST00000473036 ADARB2Q9NS39 739 aaKnown RBP16.32■□□□□ 0.2
TPM3-216ENST00000473036 FBXO3Q9UK99 471 aa16.32■□□□□ 0.2
TPM3-216ENST00000473036 SASH1O94885 1247 aa16.31■□□□□ 0.2
TPM3-216ENST00000473036 IL15P40933 162 aaPredicted RBP16.31■□□□□ 0.2
TPM3-216ENST00000473036 DACT2Q5SW24 774 aa16.31■□□□□ 0.2
TPM3-216ENST00000473036 FBXO33Q7Z6M2 555 aa16.31■□□□□ 0.2
TPM3-216ENST00000473036 ZC3H15Q8WU90 426 aaKnown RBP16.31■□□□□ 0.2
TPM3-216ENST00000473036 GMLQ99445 158 aa16.31■□□□□ 0.2
TPM3-216ENST00000473036 GPRC5DQ9NZD1 345 aa16.31■□□□□ 0.2
TPM3-216ENST00000473036 TRPM7Q96QT4 1865 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms