RNA–Protein interactions for RNA: ENST00000473003.5

RAPGEF4-208, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 4

Gene RAPGEF4, Length 593 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-208ENST00000473003 MAP3K11Q16584 847 aa10.72□□□□□ -0.69
RAPGEF4-208ENST00000473003 TBC1D16Q8TBP0 767 aa10.72□□□□□ -0.69
RAPGEF4-208ENST00000473003 FZD1Q9UP38 647 aa10.72□□□□□ -0.69
RAPGEF4-208ENST00000473003 COL1A1P02452 1464 aaPredicted RBP10.72□□□□□ -0.69
RAPGEF4-208ENST00000473003 ZSWIM8A7E2V4 1837 aa10.71□□□□□ -0.69
RAPGEF4-208ENST00000473003 WNT10BO00744 389 aa10.71□□□□□ -0.69
RAPGEF4-208ENST00000473003 GJA5P36382 358 aa10.71□□□□□ -0.69
RAPGEF4-208ENST00000473003 APOBEC3FQ8IUX4 373 aaKnown RBP10.71□□□□□ -0.69
RAPGEF4-208ENST00000473003 TDHQ8IZJ6 230 aa10.71□□□□□ -0.69
RAPGEF4-208ENST00000473003 SYMPKQ92797 1274 aaKnown RBP10.71□□□□□ -0.69
RAPGEF4-208ENST00000473003 ZC3H12CQ9C0D7 883 aaKnown RBP10.71□□□□□ -0.69
RAPGEF4-208ENST00000473003 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.71□□□□□ -0.69
RAPGEF4-208ENST00000473003 LAMA2P24043 3122 aaKnown RBP10.7□□□□□ -0.7
RAPGEF4-208ENST00000473003 IRS2Q9Y4H2 1338 aa10.7□□□□□ -0.7
RAPGEF4-208ENST00000473003 UNCXA6NJT0 531 aa10.7□□□□□ -0.7
RAPGEF4-208ENST00000473003 DIAPH1O60610 1272 aaKnown RBP10.7□□□□□ -0.7
RAPGEF4-208ENST00000473003 GNRH1P01148 92 aa10.7□□□□□ -0.7
RAPGEF4-208ENST00000473003 CCL5P13501 91 aa10.7□□□□□ -0.7
RAPGEF4-208ENST00000473003 ARHGAP39Q9C0H5 1083 aa10.7□□□□□ -0.7
RAPGEF4-208ENST00000473003 ZFYVE28Q9HCC9 887 aa10.7□□□□□ -0.7
RAPGEF4-208ENST00000473003 COL4A1P02462 1669 aa10.69□□□□□ -0.7
RAPGEF4-208ENST00000473003 G3V3G9 751 aa10.69□□□□□ -0.7
RAPGEF4-208ENST00000473003 SASH1O94885 1247 aa10.69□□□□□ -0.7
RAPGEF4-208ENST00000473003 LACTBP83111 547 aaPredicted RBP10.69□□□□□ -0.7
RAPGEF4-208ENST00000473003 KIF22Q14807 665 aa10.69□□□□□ -0.7
RAPGEF4-208ENST00000473003 TAF1CQ15572 869 aaPredicted RBP10.69□□□□□ -0.7
RAPGEF4-208ENST00000473003 DCAF8Q5TAQ9 597 aa10.69□□□□□ -0.7
RAPGEF4-208ENST00000473003 FAM109BQ6ICB4 259 aaPredicted RBP10.69□□□□□ -0.7
RAPGEF4-208ENST00000473003 U2AF1L4Q8WU68 220 aaKnown RBP10.69□□□□□ -0.7
RAPGEF4-208ENST00000473003 CELF1Q92879 486 aaKnown RBP10.69□□□□□ -0.7
RAPGEF4-208ENST00000473003 PANK3Q9H999 370 aa10.69□□□□□ -0.7
RAPGEF4-208ENST00000473003 RRP7AQ9Y3A4 280 aaKnown RBP10.69□□□□□ -0.7
RAPGEF4-208ENST00000473003 SH3TC1Q8TE82 1336 aa10.68□□□□□ -0.7
RAPGEF4-208ENST00000473003 USP17L3A6NCW0 530 aa10.68□□□□□ -0.7
RAPGEF4-208ENST00000473003 USP17L4A6NCW7 530 aa10.68□□□□□ -0.7
RAPGEF4-208ENST00000473003 TNFRSF10AO00220 468 aa10.68□□□□□ -0.7
RAPGEF4-208ENST00000473003 PPP1R12BO60237 982 aaPredicted RBP10.68□□□□□ -0.7
RAPGEF4-208ENST00000473003 UFL1O94874 794 aa10.68□□□□□ -0.7
RAPGEF4-208ENST00000473003 MYL6BP14649 208 aa10.68□□□□□ -0.7
RAPGEF4-208ENST00000473003 USP17L1Q7RTZ2 530 aa10.68□□□□□ -0.7
RAPGEF4-208ENST00000473003 POLR3GLQ9BT43 218 aa10.68□□□□□ -0.7
RAPGEF4-208ENST00000473003 RNF208Q9H0X6 261 aa10.68□□□□□ -0.7
RAPGEF4-208ENST00000473003 TMEM265A0A087WTH1 108 aa10.67□□□□□ -0.7
RAPGEF4-208ENST00000473003 GRK4P32298 578 aa10.67□□□□□ -0.7
RAPGEF4-208ENST00000473003 OGFOD1Q8N543 542 aa10.67□□□□□ -0.7
RAPGEF4-208ENST00000473003 BRI3BPQ8WY22 251 aa10.67□□□□□ -0.7
RAPGEF4-208ENST00000473003 MS4A4AQ96JQ5 239 aa10.67□□□□□ -0.7
RAPGEF4-208ENST00000473003 PODXL2Q9NZ53 605 aa10.67□□□□□ -0.7
RAPGEF4-208ENST00000473003 RIPOR2Q9Y4F9 1068 aa10.67□□□□□ -0.7
RAPGEF4-208ENST00000473003 COL3A1P02461 1466 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF4-208ENST00000473003 ALPK3Q96L96 1907 aa10.66□□□□□ -0.7
RAPGEF4-208ENST00000473003 SYNGAP1Q96PV0 1343 aa10.66□□□□□ -0.7
RAPGEF4-208ENST00000473003 POTEB2H3BUK9 544 aa10.66□□□□□ -0.7
RAPGEF4-208ENST00000473003 MAGEA10P43363 369 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF4-208ENST00000473003 NLRP10Q86W26 655 aa10.66□□□□□ -0.7
RAPGEF4-208ENST00000473003 MAFAQ8NHW3 353 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF4-208ENST00000473003 SRRDQ9UH36 339 aa10.66□□□□□ -0.7
RAPGEF4-208ENST00000473003 ZMYND8Q9ULU4 1186 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF4-208ENST00000473003 COL2A1P02458 1487 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF4-208ENST00000473003 SGPL1O95470 568 aa10.65□□□□□ -0.7
RAPGEF4-208ENST00000473003 UBXN2AP68543 259 aa10.65□□□□□ -0.7
RAPGEF4-208ENST00000473003 MAP3K12Q12852 859 aa10.65□□□□□ -0.7
RAPGEF4-208ENST00000473003 MCM10Q7L590 875 aa10.65□□□□□ -0.7
RAPGEF4-208ENST00000473003 C7orf61Q8IZ16 206 aa10.65□□□□□ -0.7
RAPGEF4-208ENST00000473003 DEFB129Q9H1M3 183 aa10.65□□□□□ -0.7
RAPGEF4-208ENST00000473003 TRMT112Q9UI30 125 aaKnown RBP10.65□□□□□ -0.7
RAPGEF4-208ENST00000473003 GGA1Q9UJY5 639 aa10.65□□□□□ -0.7
RAPGEF4-208ENST00000473003 MYO3BQ8WXR4 1341 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 CCL15-CCL14A0A0B4J2E2 113 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 TLR2O60603 784 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 CAPN2P17655 700 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 IREB2P48200 963 aaKnown RBP10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 SF3B3Q15393 1217 aaKnown RBP10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 CCL15Q16663 113 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 DACT2Q5SW24 774 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 PODNQ7Z5L7 613 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 ANKRD13AQ8IZ07 590 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 FAM43AQ8N2R8 423 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 RAET1EQ8TD07 263 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 OPTNQ96CV9 577 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 PHACTR3Q96KR7 559 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 TRIM47Q96LD4 638 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 FAM161BQ96MY7 647 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 UBE2OQ9C0C9 1292 aaKnown RBP10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 PPP2R3BQ9Y5P8 575 aa10.64□□□□□ -0.71
RAPGEF4-208ENST00000473003 FAM205AQ6ZU69 1335 aa10.63□□□□□ -0.71
RAPGEF4-208ENST00000473003 OTOFQ9HC10 1997 aa10.63□□□□□ -0.71
RAPGEF4-208ENST00000473003 U2SURPO15042 1029 aaKnown RBP10.63□□□□□ -0.71
RAPGEF4-208ENST00000473003 WDHD1O75717 1129 aaPredicted RBP10.63□□□□□ -0.71
RAPGEF4-208ENST00000473003 ECM2O94769 699 aaPredicted RBP10.63□□□□□ -0.71
RAPGEF4-208ENST00000473003 MMP14P50281 582 aa10.63□□□□□ -0.71
RAPGEF4-208ENST00000473003 HSP90AB3PQ58FF7 597 aa10.63□□□□□ -0.71
RAPGEF4-208ENST00000473003 LRP10Q7Z4F1 713 aa10.63□□□□□ -0.71
RAPGEF4-208ENST00000473003 RTF1Q92541 710 aaKnown RBP10.63□□□□□ -0.71
RAPGEF4-208ENST00000473003 ZBED3Q96IU2 234 aaPredicted RBP10.63□□□□□ -0.71
RAPGEF4-208ENST00000473003 SNX27Q96L92 541 aa10.63□□□□□ -0.71
RAPGEF4-208ENST00000473003 MXD3Q9BW11 206 aa10.63□□□□□ -0.71
RAPGEF4-208ENST00000473003 UNC93B1Q9H1C4 597 aa10.63□□□□□ -0.71
RAPGEF4-208ENST00000473003 BIN2Q9UBW5 565 aaPredicted RBP10.63□□□□□ -0.71
RAPGEF4-208ENST00000473003 OSBPP22059 807 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms