RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 PTPRMP28827 1452 aa8.14□□□□□ -1.11
NUP35-208ENST00000472844 WASHC2CQ9Y4E1 1318 aa8.14□□□□□ -1.11
NUP35-208ENST00000472844 APPP05067 770 aa8.14□□□□□ -1.11
NUP35-208ENST00000472844 GTF2E1P29083 439 aaPredicted RBP8.14□□□□□ -1.11
NUP35-208ENST00000472844 ETFBP38117 255 aa8.14□□□□□ -1.11
NUP35-208ENST00000472844 HSPA2P54652 639 aa8.14□□□□□ -1.11
NUP35-208ENST00000472844 PSMC1P62191 440 aaKnown RBP8.14□□□□□ -1.11
NUP35-208ENST00000472844 TAF11Q15544 211 aa8.14□□□□□ -1.11
NUP35-208ENST00000472844 TKFCQ3LXA3 575 aa8.14□□□□□ -1.11
NUP35-208ENST00000472844 KIAA1958Q8N8K9 716 aa8.14□□□□□ -1.11
NUP35-208ENST00000472844 ENAHQ8N8S7 591 aaPredicted RBP8.14□□□□□ -1.11
NUP35-208ENST00000472844 LSM14AQ8ND56 463 aaKnown RBP8.14□□□□□ -1.11
NUP35-208ENST00000472844 CHAC2Q8WUX2 184 aa8.14□□□□□ -1.11
NUP35-208ENST00000472844 HNRNPLLQ8WVV9 542 aaKnown RBP8.14□□□□□ -1.11
NUP35-208ENST00000472844 SEZ6LQ9BYH1 1024 aa8.14□□□□□ -1.11
NUP35-208ENST00000472844 FAM126AQ9BYI3 521 aaPredicted RBP8.14□□□□□ -1.11
NUP35-208ENST00000472844 NBPF3Q9H094 633 aa8.14□□□□□ -1.11
NUP35-208ENST00000472844 ZIM2Q9NZV7 527 aa8.14□□□□□ -1.11
NUP35-208ENST00000472844 ODF2LQ9ULJ1 636 aa8.14□□□□□ -1.11
NUP35-208ENST00000472844 C2orf72A6NCS6 295 aa8.13□□□□□ -1.11
NUP35-208ENST00000472844 PABPN1LA6NDY0 278 aaKnown RBP8.13□□□□□ -1.11
NUP35-208ENST00000472844 PRSS47A8MTI9 375 aa8.13□□□□□ -1.11
NUP35-208ENST00000472844 ORC4O43929 436 aa8.13□□□□□ -1.11
NUP35-208ENST00000472844 VARSP26640 1264 aaKnown RBP8.13□□□□□ -1.11
NUP35-208ENST00000472844 RAB27AP51159 221 aa8.13□□□□□ -1.11
NUP35-208ENST00000472844 PUM3Q15397 648 aaKnown RBP8.13□□□□□ -1.11
NUP35-208ENST00000472844 TCEA2Q15560 299 aa8.13□□□□□ -1.11
NUP35-208ENST00000472844 LMNTD2Q8IXW0 634 aa8.13□□□□□ -1.11
NUP35-208ENST00000472844 NDUFAF2Q8N183 169 aa8.13□□□□□ -1.11
NUP35-208ENST00000472844 CCDC47Q96A33 483 aaKnown RBP8.13□□□□□ -1.11
NUP35-208ENST00000472844 NUDT16Q96DE0 195 aaKnown RBP8.13□□□□□ -1.11
NUP35-208ENST00000472844 MPP4Q96JB8 637 aa8.13□□□□□ -1.11
NUP35-208ENST00000472844 HERPUD2Q9BSE4 406 aa8.13□□□□□ -1.11
NUP35-208ENST00000472844 CCDC113Q9H0I3 377 aa8.13□□□□□ -1.11
NUP35-208ENST00000472844 MRVI1Q9Y6F6 885 aa8.13□□□□□ -1.11
NUP35-208ENST00000472844 GRIN2AQ12879 1464 aa8.13□□□□□ -1.11
NUP35-208ENST00000472844 SYNRGQ9UMZ2 1314 aa8.12□□□□□ -1.11
NUP35-208ENST00000472844 PNMA6FA0A0J9YX94 578 aa8.12□□□□□ -1.11
NUP35-208ENST00000472844 DIAPH1O60610 1272 aaKnown RBP8.12□□□□□ -1.11
NUP35-208ENST00000472844 DKK1O94907 266 aa8.12□□□□□ -1.11
NUP35-208ENST00000472844 NBPF7P0C2Y1 421 aaPredicted RBP8.12□□□□□ -1.11
NUP35-208ENST00000472844 POU3F3P20264 500 aaPredicted RBP8.12□□□□□ -1.11
NUP35-208ENST00000472844 FLT3P36888 993 aa8.12□□□□□ -1.11
NUP35-208ENST00000472844 SARSP49591 514 aaKnown RBP8.12□□□□□ -1.11
NUP35-208ENST00000472844 CLK1P49759 484 aaKnown RBP8.12□□□□□ -1.11
NUP35-208ENST00000472844 ST13P50502 369 aaKnown RBP8.12□□□□□ -1.11
NUP35-208ENST00000472844 USP46P62068 366 aa8.12□□□□□ -1.11
NUP35-208ENST00000472844 MTA1Q13330 715 aa8.12□□□□□ -1.11
NUP35-208ENST00000472844 SQSTM1Q13501 440 aa8.12□□□□□ -1.11
NUP35-208ENST00000472844 LARP1BQ659C4 914 aaKnown RBP8.12□□□□□ -1.11
NUP35-208ENST00000472844 MMS22LQ6ZRQ5 1243 aa8.12□□□□□ -1.11
NUP35-208ENST00000472844 CAPN12Q6ZSI9 719 aa8.12□□□□□ -1.11
NUP35-208ENST00000472844 RELL1Q8IUW5 271 aa8.12□□□□□ -1.11
NUP35-208ENST00000472844 ALKBH8Q96BT7 664 aaKnown RBP8.12□□□□□ -1.11
NUP35-208ENST00000472844 SCLT1Q96NL6 688 aa8.12□□□□□ -1.11
NUP35-208ENST00000472844 C2orf49Q9BVC5 232 aaPredicted RBP8.12□□□□□ -1.11
NUP35-208ENST00000472844 ATG3Q9NT62 314 aa8.12□□□□□ -1.11
NUP35-208ENST00000472844 PLAAQ9Y263 795 aa8.12□□□□□ -1.11
NUP35-208ENST00000472844 PRG4Q92954 1404 aaPredicted RBP8.12□□□□□ -1.11
NUP35-208ENST00000472844 GOLGA6L6A8MZA4 724 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 CFAP99D6REC4 459 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 RIMBP2O15034 1052 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 RAPGEF3O95398 923 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 F2P00734 622 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 MPSTP25325 297 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 NASPP49321 788 aaPredicted RBP8.11□□□□□ -1.11
NUP35-208ENST00000472844 PRSS12P56730 875 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 PURAQ00577 322 aaKnown RBP8.11□□□□□ -1.11
NUP35-208ENST00000472844 WASHC5Q12768 1159 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 PDE1CQ14123 709 aaPredicted RBP8.11□□□□□ -1.11
NUP35-208ENST00000472844 MLC1Q15049 377 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 MAP7D1Q3KQU3 841 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 DALRD3Q5D0E6 543 aaKnown RBP8.11□□□□□ -1.11
NUP35-208ENST00000472844 CT47A1Q5JQC4 288 aaPredicted RBP8.11□□□□□ -1.11
NUP35-208ENST00000472844 ANKRD13DQ6ZTN6 518 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 IFNL2Q8IZJ0 200 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 TPCN2Q8NHX9 752 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 FRS2Q8WU20 508 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 FAM129BQ96TA1 746 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 HINFPQ9BQA5 517 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 RBSNQ9H1K0 784 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 CXorf56Q9H5V9 222 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 C9orf78Q9NZ63 289 aaPredicted RBP8.11□□□□□ -1.11
NUP35-208ENST00000472844 STRIP2Q9ULQ0 834 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 NUP160Q12769 1436 aa8.11□□□□□ -1.11
NUP35-208ENST00000472844 GPR182O15218 404 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 AKAP10O43572 662 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 DDIT3P35638 169 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 HALP42357 657 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 TDO2P48775 406 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 GPSM2P81274 684 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 NFKB2Q00653 900 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 PICALMQ13492 652 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 NAA30Q147X3 362 aaPredicted RBP8.1□□□□□ -1.11
NUP35-208ENST00000472844 SEPT2Q15019 361 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 GFOD2Q3B7J2 385 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 PPP4R3AQ6IN85 833 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 DGKHQ86XP1 1220 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 EGFL6Q8IUX8 553 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 TRIM52Q96A61 297 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms