RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 RAB11FIP3O75154 756 aa24.69■■□□□ 1.54
SF1-213ENST00000472725 SLC5A1P13866 664 aa24.69■■□□□ 1.54
SF1-213ENST00000472725 EIF6P56537 245 aaKnown RBP24.69■■□□□ 1.54
SF1-213ENST00000472725 DPY19L2Q6NUT2 758 aa24.69■■□□□ 1.54
SF1-213ENST00000472725 WTIPA6NIX2 430 aaPredicted RBP24.68■■□□□ 1.54
SF1-213ENST00000472725 SASH1O94885 1247 aa24.68■■□□□ 1.54
SF1-213ENST00000472725 ATP2B3Q16720 1220 aa24.68■■□□□ 1.54
SF1-213ENST00000472725 ZNF804AQ7Z570 1209 aa24.68■■□□□ 1.54
SF1-213ENST00000472725 GPR101Q96P66 508 aaPredicted RBP24.68■■□□□ 1.54
SF1-213ENST00000472725 ECE2O60344 883 aa24.67■■□□□ 1.54
SF1-213ENST00000472725 TFCP2Q12800 502 aa24.67■■□□□ 1.54
SF1-213ENST00000472725 CAVIN4Q5BKX8 364 aa24.67■■□□□ 1.54
SF1-213ENST00000472725 SNAP23O00161 211 aa24.66■■□□□ 1.54
SF1-213ENST00000472725 ZBTB22O15209 634 aa24.66■■□□□ 1.54
SF1-213ENST00000472725 HDAC1Q13547 482 aaPredicted RBP24.66■■□□□ 1.54
SF1-213ENST00000472725 TXNRD3Q86VQ6 643 aa24.66■■□□□ 1.54
SF1-213ENST00000472725 DCTPP1Q9H773 170 aa24.66■■□□□ 1.54
SF1-213ENST00000472725 ARAP2Q8WZ64 1704 aa24.66■■□□□ 1.54
SF1-213ENST00000472725 GLTPD2A6NH11 291 aa24.65■■□□□ 1.54
SF1-213ENST00000472725 YY1P25490 414 aa24.65■■□□□ 1.54
SF1-213ENST00000472725 TNIP1Q15025 636 aa24.65■■□□□ 1.54
SF1-213ENST00000472725 KIF1BPQ96EK5 621 aa24.65■■□□□ 1.54
SF1-213ENST00000472725 DBNDD1Q9H9R9 158 aa24.65■■□□□ 1.54
SF1-213ENST00000472725 EXOC6BQ9Y2D4 811 aa24.65■■□□□ 1.54
SF1-213ENST00000472725 PSME4Q14997 1843 aa24.65■■□□□ 1.54
SF1-213ENST00000472725 KDM2BQ8NHM5 1336 aa24.64■■□□□ 1.54
SF1-213ENST00000472725 IL1R1P14778 569 aa24.64■■□□□ 1.54
SF1-213ENST00000472725 KLRK1P26718 216 aa24.64■■□□□ 1.54
SF1-213ENST00000472725 HIBADHP31937 336 aaKnown RBP24.64■■□□□ 1.54
SF1-213ENST00000472725 DOK7Q18PE1 504 aa24.64■■□□□ 1.54
SF1-213ENST00000472725 FBXO33Q7Z6M2 555 aa24.64■■□□□ 1.54
SF1-213ENST00000472725 GPC2Q8N158 579 aa24.64■■□□□ 1.54
SF1-213ENST00000472725 FAM84BQ96KN1 310 aaPredicted RBP24.64■■□□□ 1.54
SF1-213ENST00000472725 CD209Q9NNX6 404 aa24.64■■□□□ 1.54
SF1-213ENST00000472725 A0A1B0GUL7 405 aa24.63■■□□□ 1.53
SF1-213ENST00000472725 YDJCA8MPS7 323 aa24.63■■□□□ 1.53
SF1-213ENST00000472725 CIAPIN1Q6FI81 312 aa24.63■■□□□ 1.53
SF1-213ENST00000472725 RHPN1Q8TCX5 695 aa24.63■■□□□ 1.53
SF1-213ENST00000472725 ZNF609O15014 1411 aa24.62■■□□□ 1.53
SF1-213ENST00000472725 CXCL9Q07325 125 aa24.62■■□□□ 1.53
SF1-213ENST00000472725 VPS37DQ86XT2 251 aa24.62■■□□□ 1.53
SF1-213ENST00000472725 RWDD1Q9H446 243 aaPredicted RBP24.62■■□□□ 1.53
SF1-213ENST00000472725 IRX6P78412 446 aaPredicted RBP24.61■■□□□ 1.53
SF1-213ENST00000472725 TNNI3KQ59H18 835 aa24.61■■□□□ 1.53
SF1-213ENST00000472725 TDRD7Q8NHU6 1098 aaKnown RBP24.61■■□□□ 1.53
SF1-213ENST00000472725 FPGT-TNNI3KV9GXZ4 949 aa24.61■■□□□ 1.53
SF1-213ENST00000472725 ZNF541Q9H0D2 1346 aa24.61■■□□□ 1.53
SF1-213ENST00000472725 SCN9AQ15858 1988 aa24.6■■□□□ 1.53
SF1-213ENST00000472725 GYG1P46976 350 aa24.6■■□□□ 1.53
SF1-213ENST00000472725 GCC1Q96CN9 775 aa24.6■■□□□ 1.53
SF1-213ENST00000472725 GNL3LQ9NVN8 582 aaKnown RBP24.6■■□□□ 1.53
SF1-213ENST00000472725 USP17L3A6NCW0 530 aa24.59■■□□□ 1.53
SF1-213ENST00000472725 USP17L4A6NCW7 530 aa24.59■■□□□ 1.53
SF1-213ENST00000472725 NEFLP07196 543 aa24.59■■□□□ 1.53
SF1-213ENST00000472725 TIMM10P62072 90 aa24.59■■□□□ 1.53
SF1-213ENST00000472725 STRIP1Q5VSL9 837 aa24.59■■□□□ 1.53
SF1-213ENST00000472725 USP17L1Q7RTZ2 530 aa24.59■■□□□ 1.53
SF1-213ENST00000472725 CLASRPQ8N2M8 674 aaKnown RBP24.59■■□□□ 1.53
SF1-213ENST00000472725 XAGE2Q96GT9 111 aa24.59■■□□□ 1.53
SF1-213ENST00000472725 L3MBTL3Q96JM7 780 aaPredicted RBP24.59■■□□□ 1.53
SF1-213ENST00000472725 LRRCC1Q9C099 1032 aa24.59■■□□□ 1.53
SF1-213ENST00000472725 WDR90Q96KV7 1748 aa24.58■■□□□ 1.53
SF1-213ENST00000472725 SEMA3EO15041 775 aa24.58■■□□□ 1.53
SF1-213ENST00000472725 VIL1P09327 827 aaKnown RBP24.58■■□□□ 1.53
SF1-213ENST00000472725 RPS12P25398 132 aaKnown RBP24.58■■□□□ 1.53
SF1-213ENST00000472725 NEUROD6Q96NK8 337 aa24.58■■□□□ 1.53
SF1-213ENST00000472725 RAD17O75943 681 aa24.57■■□□□ 1.52
SF1-213ENST00000472725 FKBP1AP62942 108 aaKnown RBP24.57■■□□□ 1.52
SF1-213ENST00000472725 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.57■■□□□ 1.52
SF1-213ENST00000472725 MYO3BQ8WXR4 1341 aa24.57■■□□□ 1.52
SF1-213ENST00000472725 SCN4AP35499 1836 aa24.56■■□□□ 1.52
SF1-213ENST00000472725 PSMD14O00487 310 aa24.56■■□□□ 1.52
SF1-213ENST00000472725 DDNO94850 711 aaPredicted RBP24.56■■□□□ 1.52
SF1-213ENST00000472725 MMP14P50281 582 aa24.56■■□□□ 1.52
SF1-213ENST00000472725 BCAMP50895 628 aa24.56■■□□□ 1.52
SF1-213ENST00000472725 TTLL5Q6EMB2 1281 aa24.56■■□□□ 1.52
SF1-213ENST00000472725 FAM205AQ6ZU69 1335 aa24.56■■□□□ 1.52
SF1-213ENST00000472725 GORABQ5T7V8 394 aa24.55■■□□□ 1.52
SF1-213ENST00000472725 CCDC102BQ68D86 513 aa24.55■■□□□ 1.52
SF1-213ENST00000472725 AGBL3Q8NEM8 1001 aa24.55■■□□□ 1.52
SF1-213ENST00000472725 DPF2Q92785 391 aa24.55■■□□□ 1.52
SF1-213ENST00000472725 EAF2Q96CJ1 260 aaPredicted RBP24.55■■□□□ 1.52
SF1-213ENST00000472725 GJA3Q9Y6H8 435 aa24.55■■□□□ 1.52
SF1-213ENST00000472725 MYH13Q9UKX3 1938 aa24.55■■□□□ 1.52
SF1-213ENST00000472725 ZNF646O15015 1829 aaPredicted RBP24.54■■□□□ 1.52
SF1-213ENST00000472725 IQCA1LA6NCM1 817 aa24.54■■□□□ 1.52
SF1-213ENST00000472725 RSBN1LQ6PCB5 846 aaPredicted RBP24.54■■□□□ 1.52
SF1-213ENST00000472725 PDS5AQ29RF7 1337 aaKnown RBP24.54■■□□□ 1.52
SF1-213ENST00000472725 FRAT2O75474 233 aaPredicted RBP24.53■■□□□ 1.52
SF1-213ENST00000472725 UQCRFS1P1P0C7P4 283 aa24.53■■□□□ 1.52
SF1-213ENST00000472725 ADORA1P30542 326 aa24.53■■□□□ 1.52
SF1-213ENST00000472725 GTF2IP78347 998 aa24.53■■□□□ 1.52
SF1-213ENST00000472725 CCDC158Q5M9N0 1113 aa24.53■■□□□ 1.52
SF1-213ENST00000472725 DACT2Q5SW24 774 aa24.53■■□□□ 1.52
SF1-213ENST00000472725 TBC1D22AQ8WUA7 517 aa24.53■■□□□ 1.52
SF1-213ENST00000472725 ZNF512BQ96KM6 892 aaPredicted RBP24.53■■□□□ 1.52
SF1-213ENST00000472725 KCNQ5Q9NR82 932 aa24.53■■□□□ 1.52
SF1-213ENST00000472725 DENND2AQ9ULE3 1009 aa24.53■■□□□ 1.52
SF1-213ENST00000472725 APBB1O00213 710 aa24.52■■□□□ 1.52
SF1-213ENST00000472725 PHKA1P46020 1223 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms