RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 ITGA6P23229 1130 aa14.95□□□□□ -0.02
CLRN1-205ENST00000472224 IGHMBP2P38935 993 aaKnown RBP14.95□□□□□ -0.02
CLRN1-205ENST00000472224 NIM1KQ8IY84 436 aa14.95□□□□□ -0.02
CLRN1-205ENST00000472224 SUCLG2Q96I99 432 aa14.95□□□□□ -0.02
CLRN1-205ENST00000472224 ADARB2Q9NS39 739 aaKnown RBP14.95□□□□□ -0.02
CLRN1-205ENST00000472224 ANKIB1Q9P2G1 1089 aa14.95□□□□□ -0.02
CLRN1-205ENST00000472224 A0A1B0GUL6 1792 aa14.95□□□□□ -0.02
CLRN1-205ENST00000472224 C6orf229H3BNL8 230 aa14.94□□□□□ -0.02
CLRN1-205ENST00000472224 NBPF7P0C2Y1 421 aaPredicted RBP14.94□□□□□ -0.02
CLRN1-205ENST00000472224 CCT4P50991 539 aaKnown RBP14.94□□□□□ -0.02
CLRN1-205ENST00000472224 FOXO4P98177 505 aa14.94□□□□□ -0.02
CLRN1-205ENST00000472224 TAF7LQ5H9L4 462 aa14.94□□□□□ -0.02
CLRN1-205ENST00000472224 EPHA10Q5JZY3 1008 aa14.94□□□□□ -0.02
CLRN1-205ENST00000472224 LMBR1LQ6UX01 489 aa14.94□□□□□ -0.02
CLRN1-205ENST00000472224 YTHDC1Q96MU7 727 aaKnown RBP14.94□□□□□ -0.02
CLRN1-205ENST00000472224 ZNF408Q9H9D4 720 aa14.94□□□□□ -0.02
CLRN1-205ENST00000472224 PGAP2Q9UHJ9 254 aa14.94□□□□□ -0.02
CLRN1-205ENST00000472224 AKAP11Q9UKA4 1901 aa14.94□□□□□ -0.02
CLRN1-205ENST00000472224 ANKRD18BA2A2Z9 1011 aa14.93□□□□□ -0.02
CLRN1-205ENST00000472224 IPO8O15397 1037 aaKnown RBP14.93□□□□□ -0.02
CLRN1-205ENST00000472224 UFL1O94874 794 aa14.93□□□□□ -0.02
CLRN1-205ENST00000472224 NOGQ13253 232 aa14.93□□□□□ -0.02
CLRN1-205ENST00000472224 IFIT5Q13325 482 aaKnown RBP14.93□□□□□ -0.02
CLRN1-205ENST00000472224 MPHOSPH8Q99549 860 aa14.93□□□□□ -0.02
CLRN1-205ENST00000472224 RTFDC1Q9BY42 306 aaPredicted RBP14.93□□□□□ -0.02
CLRN1-205ENST00000472224 FAM155AB1AL88 458 aaPredicted RBP14.92□□□□□ -0.02
CLRN1-205ENST00000472224 RIMBP2O15034 1052 aa14.92□□□□□ -0.02
CLRN1-205ENST00000472224 CSF1RP07333 972 aa14.92□□□□□ -0.02
CLRN1-205ENST00000472224 HIRAP54198 1017 aaPredicted RBP14.92□□□□□ -0.02
CLRN1-205ENST00000472224 CCDC57Q2TAC2 916 aa14.92□□□□□ -0.02
CLRN1-205ENST00000472224 DLK2Q6UY11 383 aa14.92□□□□□ -0.02
CLRN1-205ENST00000472224 CLUAP1Q96AJ1 413 aa14.92□□□□□ -0.02
CLRN1-205ENST00000472224 BICC1Q9H694 974 aaKnown RBP14.92□□□□□ -0.02
CLRN1-205ENST00000472224 GGA1Q9UJY5 639 aa14.92□□□□□ -0.02
CLRN1-205ENST00000472224 TNNQ9UQP3 1299 aa14.92□□□□□ -0.02
CLRN1-205ENST00000472224 SSUH2Q9Y2M2 353 aa14.92□□□□□ -0.02
CLRN1-205ENST00000472224 MKI67P46013 3256 aaKnown RBP14.91□□□□□ -0.02
CLRN1-205ENST00000472224 TRIM27P14373 513 aa14.91□□□□□ -0.02
CLRN1-205ENST00000472224 GMPSP49915 693 aaPredicted RBP14.91□□□□□ -0.02
CLRN1-205ENST00000472224 ATF7IPQ6VMQ6 1270 aa14.91□□□□□ -0.02
CLRN1-205ENST00000472224 EYA3Q99504 573 aa14.91□□□□□ -0.02
CLRN1-205ENST00000472224 BSDC1Q9NW68 430 aaPredicted RBP14.91□□□□□ -0.02
CLRN1-205ENST00000472224 SAGE1Q9NXZ1 904 aa14.91□□□□□ -0.02
CLRN1-205ENST00000472224 POLLQ9UGP5 575 aa14.91□□□□□ -0.02
CLRN1-205ENST00000472224 UTYO14607 1347 aa14.91□□□□□ -0.02
CLRN1-205ENST00000472224 XDHP47989 1333 aa14.91□□□□□ -0.02
CLRN1-205ENST00000472224 UBTFL1P0CB47 393 aaPredicted RBP14.9□□□□□ -0.02
CLRN1-205ENST00000472224 CXCL9Q07325 125 aa14.9□□□□□ -0.02
CLRN1-205ENST00000472224 KIAA2012Q0VF49 1180 aa14.9□□□□□ -0.02
CLRN1-205ENST00000472224 WASHC4Q2M389 1173 aa14.9□□□□□ -0.02
CLRN1-205ENST00000472224 ZKSCAN2Q63HK3 967 aa14.9□□□□□ -0.02
CLRN1-205ENST00000472224 TBC1D16Q8TBP0 767 aa14.9□□□□□ -0.02
CLRN1-205ENST00000472224 ARHGAP45Q92619 1136 aa14.9□□□□□ -0.02
CLRN1-205ENST00000472224 ZNF594Q96JF6 807 aaPredicted RBP14.9□□□□□ -0.02
CLRN1-205ENST00000472224 USP44Q9H0E7 712 aa14.9□□□□□ -0.02
CLRN1-205ENST00000472224 MINPP1Q9UNW1 487 aa14.9□□□□□ -0.02
CLRN1-205ENST00000472224 G3V3G9 751 aa14.89□□□□□ -0.03
CLRN1-205ENST00000472224 HUNKP57058 714 aa14.89□□□□□ -0.03
CLRN1-205ENST00000472224 DCAF8Q5TAQ9 597 aa14.89□□□□□ -0.03
CLRN1-205ENST00000472224 FTSJ3Q8IY81 847 aaKnown RBP14.89□□□□□ -0.03
CLRN1-205ENST00000472224 TRPM4Q8TD43 1214 aa14.89□□□□□ -0.03
CLRN1-205ENST00000472224 KAZALD1Q96I82 304 aa14.89□□□□□ -0.03
CLRN1-205ENST00000472224 VPS33BQ9H267 617 aa14.89□□□□□ -0.03
CLRN1-205ENST00000472224 DBNDD1Q9H9R9 158 aa14.89□□□□□ -0.03
CLRN1-205ENST00000472224 RNF186Q9NXI6 227 aa14.89□□□□□ -0.03
CLRN1-205ENST00000472224 SCN9AQ15858 1988 aa14.89□□□□□ -0.03
CLRN1-205ENST00000472224 POLR2AP24928 1970 aaKnown RBP14.88□□□□□ -0.03
CLRN1-205ENST00000472224 SHTN1A0MZ66 631 aa14.88□□□□□ -0.03
CLRN1-205ENST00000472224 ATP2B4P23634 1241 aa14.88□□□□□ -0.03
CLRN1-205ENST00000472224 KCNJ4P48050 445 aa14.88□□□□□ -0.03
CLRN1-205ENST00000472224 DOK7Q18PE1 504 aa14.88□□□□□ -0.03
CLRN1-205ENST00000472224 ANKRD44Q8N8A2 993 aa14.88□□□□□ -0.03
CLRN1-205ENST00000472224 ZC3H15Q8WU90 426 aaKnown RBP14.88□□□□□ -0.03
CLRN1-205ENST00000472224 MEIS3Q99687 375 aa14.88□□□□□ -0.03
CLRN1-205ENST00000472224 ZC3H12CQ9C0D7 883 aaKnown RBP14.88□□□□□ -0.03
CLRN1-205ENST00000472224 PODXL2Q9NZ53 605 aa14.88□□□□□ -0.03
CLRN1-205ENST00000472224 ZNRF3Q9ULT6 936 aa14.88□□□□□ -0.03
CLRN1-205ENST00000472224 TRPA1O75762 1119 aa14.87□□□□□ -0.03
CLRN1-205ENST00000472224 RAD17O75943 681 aa14.87□□□□□ -0.03
CLRN1-205ENST00000472224 KIF23Q02241 960 aaPredicted RBP14.87□□□□□ -0.03
CLRN1-205ENST00000472224 CDC37L1Q7L3B6 337 aa14.87□□□□□ -0.03
CLRN1-205ENST00000472224 CNNM1Q9NRU3 951 aa14.87□□□□□ -0.03
CLRN1-205ENST00000472224 HPS5Q9UPZ3 1129 aa14.87□□□□□ -0.03
CLRN1-205ENST00000472224 PLIN1O60240 522 aa14.86□□□□□ -0.03
CLRN1-205ENST00000472224 ECE2O60344 883 aa14.86□□□□□ -0.03
CLRN1-205ENST00000472224 CHRNDQ07001 517 aa14.86□□□□□ -0.03
CLRN1-205ENST00000472224 INTS3Q68E01 1043 aaKnown RBP14.86□□□□□ -0.03
CLRN1-205ENST00000472224 RGMBQ6NW40 437 aa14.86□□□□□ -0.03
CLRN1-205ENST00000472224 LDHAL6AQ6ZMR3 332 aa14.86□□□□□ -0.03
CLRN1-205ENST00000472224 CTU1Q7Z7A3 348 aaKnown RBP14.86□□□□□ -0.03
CLRN1-205ENST00000472224 USP48Q86UV5 1035 aa14.86□□□□□ -0.03
CLRN1-205ENST00000472224 HELBQ8NG08 1087 aaPredicted RBP14.86□□□□□ -0.03
CLRN1-205ENST00000472224 ANKRD2Q9GZV1 360 aa14.86□□□□□ -0.03
CLRN1-205ENST00000472224 LRRFIP2Q9Y608 721 aaKnown RBP14.86□□□□□ -0.03
CLRN1-205ENST00000472224 PSME4Q14997 1843 aa14.86□□□□□ -0.03
CLRN1-205ENST00000472224 HTTP42858 3142 aa14.85□□□□□ -0.03
CLRN1-205ENST00000472224 WTIPA6NIX2 430 aaPredicted RBP14.85□□□□□ -0.03
CLRN1-205ENST00000472224 YDJCA8MPS7 323 aa14.85□□□□□ -0.03
CLRN1-205ENST00000472224 RABL6Q3YEC7 729 aaPredicted RBP14.85□□□□□ -0.03
CLRN1-205ENST00000472224 TMEM57Q8N5G2 664 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms