RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 BEND7Q8N7W2 519 aaPredicted RBP8.03□□□□□ -1.12
CDHR3-208ENST00000471910 TMEM102Q8N9M5 508 aaPredicted RBP8.03□□□□□ -1.12
CDHR3-208ENST00000471910 EPS8L3Q8TE67 593 aaKnown RBP8.03□□□□□ -1.12
CDHR3-208ENST00000471910 ZKSCAN3Q9BRR0 538 aa8.03□□□□□ -1.12
CDHR3-208ENST00000471910 LIN7BQ9HAP6 207 aa8.03□□□□□ -1.12
CDHR3-208ENST00000471910 WWC3Q9ULE0 1092 aa8.03□□□□□ -1.12
CDHR3-208ENST00000471910 MKL2Q9ULH7 1088 aa8.03□□□□□ -1.12
CDHR3-208ENST00000471910 TRAK1Q9UPV9 953 aa8.03□□□□□ -1.12
CDHR3-208ENST00000471910 GIPC1O14908 333 aa8.02□□□□□ -1.13
CDHR3-208ENST00000471910 PTPRAP18433 802 aa8.02□□□□□ -1.13
CDHR3-208ENST00000471910 LORP23490 312 aaPredicted RBP8.02□□□□□ -1.13
CDHR3-208ENST00000471910 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.02□□□□□ -1.13
CDHR3-208ENST00000471910 PEAR1Q5VY43 1037 aaPredicted RBP8.02□□□□□ -1.13
CDHR3-208ENST00000471910 GDF6Q6KF10 455 aaPredicted RBP8.02□□□□□ -1.13
CDHR3-208ENST00000471910 SUV39H2Q9H5I1 410 aa8.02□□□□□ -1.13
CDHR3-208ENST00000471910 LATS2Q9NRM7 1088 aa8.02□□□□□ -1.13
CDHR3-208ENST00000471910 ADAMTS8Q9UP79 889 aa8.02□□□□□ -1.13
CDHR3-208ENST00000471910 SPDYE3A6NKU9 549 aa8.01□□□□□ -1.13
CDHR3-208ENST00000471910 ACPPP15309 386 aa8.01□□□□□ -1.13
CDHR3-208ENST00000471910 DGKGP49619 791 aa8.01□□□□□ -1.13
CDHR3-208ENST00000471910 AFF1P51825 1210 aaKnown RBP8.01□□□□□ -1.13
CDHR3-208ENST00000471910 FBXO33Q7Z6M2 555 aa8.01□□□□□ -1.13
CDHR3-208ENST00000471910 RGS22Q8NE09 1264 aa8.01□□□□□ -1.13
CDHR3-208ENST00000471910 GIPC2Q8TF65 315 aa8.01□□□□□ -1.13
CDHR3-208ENST00000471910 NXPE3Q969Y0 559 aa8.01□□□□□ -1.13
CDHR3-208ENST00000471910 SCARF2Q96GP6 870 aaPredicted RBP8.01□□□□□ -1.13
CDHR3-208ENST00000471910 POP1Q99575 1024 aaKnown RBP8.01□□□□□ -1.13
CDHR3-208ENST00000471910 MUC3BQ9H195 1237 aa8.01□□□□□ -1.13
CDHR3-208ENST00000471910 NFKBIEO00221 500 aa8□□□□□ -1.13
CDHR3-208ENST00000471910 TRPA1O75762 1119 aa8□□□□□ -1.13
CDHR3-208ENST00000471910 CDC27P30260 824 aa8□□□□□ -1.13
CDHR3-208ENST00000471910 IRS1P35568 1242 aa8□□□□□ -1.13
CDHR3-208ENST00000471910 CABP4P57796 275 aa8□□□□□ -1.13
CDHR3-208ENST00000471910 C8orf86Q6ZUL3 223 aa8□□□□□ -1.13
CDHR3-208ENST00000471910 WFDC8Q8IUA0 241 aa8□□□□□ -1.13
CDHR3-208ENST00000471910 ASAP3Q8TDY4 903 aa8□□□□□ -1.13
CDHR3-208ENST00000471910 DUSP9Q99956 384 aaKnown RBP8□□□□□ -1.13
CDHR3-208ENST00000471910 SRCIN1Q9C0H9 1055 aa8□□□□□ -1.13
CDHR3-208ENST00000471910 TRIM33Q9UPN9 1127 aa8□□□□□ -1.13
CDHR3-208ENST00000471910 GNB5O14775 395 aa7.99□□□□□ -1.13
CDHR3-208ENST00000471910 GNA15P30679 374 aa7.99□□□□□ -1.13
CDHR3-208ENST00000471910 MSL1Q68DK7 614 aa7.99□□□□□ -1.13
CDHR3-208ENST00000471910 CCNJLQ8IV13 435 aa7.99□□□□□ -1.13
CDHR3-208ENST00000471910 IL22RA1Q8N6P7 574 aa7.99□□□□□ -1.13
CDHR3-208ENST00000471910 SETDB2Q96T68 719 aa7.99□□□□□ -1.13
CDHR3-208ENST00000471910 BCO2Q9BYV7 579 aa7.99□□□□□ -1.13
CDHR3-208ENST00000471910 BHLHE41Q9C0J9 482 aaPredicted RBP7.99□□□□□ -1.13
CDHR3-208ENST00000471910 LACRTQ9GZZ8 138 aa7.99□□□□□ -1.13
CDHR3-208ENST00000471910 ZFYVE1Q9HBF4 777 aa7.99□□□□□ -1.13
CDHR3-208ENST00000471910 SNRPNP63162 240 aaKnown RBP7.98□□□□□ -1.13
CDHR3-208ENST00000471910 PSMD2Q13200 908 aa7.98□□□□□ -1.13
CDHR3-208ENST00000471910 GRIK5Q16478 980 aa7.98□□□□□ -1.13
CDHR3-208ENST00000471910 TRAPPC3LQ5T215 181 aa7.98□□□□□ -1.13
CDHR3-208ENST00000471910 FAM117BQ6P1L5 589 aa7.98□□□□□ -1.13
CDHR3-208ENST00000471910 PI16Q6UXB8 463 aa7.98□□□□□ -1.13
CDHR3-208ENST00000471910 BSNDQ8WZ55 320 aa7.98□□□□□ -1.13
CDHR3-208ENST00000471910 ADAM19Q9H013 955 aa7.98□□□□□ -1.13
CDHR3-208ENST00000471910 MRS2Q9HD23 443 aa7.98□□□□□ -1.13
CDHR3-208ENST00000471910 NOP53Q9NZM5 478 aaKnown RBP7.98□□□□□ -1.13
CDHR3-208ENST00000471910 STK17AQ9UEE5 414 aa7.98□□□□□ -1.13
CDHR3-208ENST00000471910 PARP2Q9UGN5 583 aa7.98□□□□□ -1.13
CDHR3-208ENST00000471910 A0A096LPE4 126 aa7.97□□□□□ -1.13
CDHR3-208ENST00000471910 A0A1W2PPZ6 126 aa7.97□□□□□ -1.13
CDHR3-208ENST00000471910 EIF4BP23588 611 aaKnown RBP7.97□□□□□ -1.13
CDHR3-208ENST00000471910 GRM2Q14416 872 aa7.97□□□□□ -1.13
CDHR3-208ENST00000471910 LINC00114Q6XXX2 140 aa7.97□□□□□ -1.13
CDHR3-208ENST00000471910 HHIPQ96QV1 700 aa7.97□□□□□ -1.13
CDHR3-208ENST00000471910 TCF12Q99081 682 aa7.97□□□□□ -1.13
CDHR3-208ENST00000471910 PPME1Q9Y570 386 aa7.97□□□□□ -1.13
CDHR3-208ENST00000471910 TMEM238LA0A1B0GVL6 79 aa7.96□□□□□ -1.14
CDHR3-208ENST00000471910 RBM47A0AV96 593 aaKnown RBP7.96□□□□□ -1.14
CDHR3-208ENST00000471910 XRCC5P13010 732 aaKnown RBP7.96□□□□□ -1.14
CDHR3-208ENST00000471910 NID1P14543 1247 aa7.96□□□□□ -1.14
CDHR3-208ENST00000471910 HOXB4P17483 251 aaPredicted RBP7.96□□□□□ -1.14
CDHR3-208ENST00000471910 PRPF40BQ6NWY9 871 aaKnown RBP7.96□□□□□ -1.14
CDHR3-208ENST00000471910 NXPE4Q6UWF7 544 aa7.96□□□□□ -1.14
CDHR3-208ENST00000471910 DMRTC2Q8IXT2 367 aaPredicted RBP7.96□□□□□ -1.14
CDHR3-208ENST00000471910 FOXD4L4Q8WXT5 416 aaPredicted RBP7.96□□□□□ -1.14
CDHR3-208ENST00000471910 PLVAPQ9BX97 442 aa7.96□□□□□ -1.14
CDHR3-208ENST00000471910 C12orf49Q9H741 205 aa7.96□□□□□ -1.14
CDHR3-208ENST00000471910 AK5Q9Y6K8 562 aa7.96□□□□□ -1.14
CDHR3-208ENST00000471910 CNTNAP5Q8WYK1 1306 aa7.96□□□□□ -1.14
CDHR3-208ENST00000471910 ZNF16P17020 682 aaPredicted RBP7.95□□□□□ -1.14
CDHR3-208ENST00000471910 ARL4DP49703 201 aa7.95□□□□□ -1.14
CDHR3-208ENST00000471910 RAC1P63000 192 aa7.95□□□□□ -1.14
CDHR3-208ENST00000471910 DAB2P98082 770 aa7.95□□□□□ -1.14
CDHR3-208ENST00000471910 TAGLNQ01995 201 aaKnown RBP7.95□□□□□ -1.14
CDHR3-208ENST00000471910 PTPN12Q05209 780 aaKnown RBP7.95□□□□□ -1.14
CDHR3-208ENST00000471910 TRIM28Q13263 835 aaKnown RBP7.95□□□□□ -1.14
CDHR3-208ENST00000471910 DTHD1Q6ZMT9 781 aa7.95□□□□□ -1.14
CDHR3-208ENST00000471910 TMC4Q7Z404 712 aa7.95□□□□□ -1.14
CDHR3-208ENST00000471910 DCAF11Q8TEB1 546 aa7.95□□□□□ -1.14
CDHR3-208ENST00000471910 FAM8A1Q9UBU6 413 aa7.95□□□□□ -1.14
CDHR3-208ENST00000471910 RNF225M0QZC1 329 aaPredicted RBP7.94□□□□□ -1.14
CDHR3-208ENST00000471910 SORBS3O60504 671 aa7.94□□□□□ -1.14
CDHR3-208ENST00000471910 GSTT1P30711 240 aa7.94□□□□□ -1.14
CDHR3-208ENST00000471910 GRIA4P48058 902 aa7.94□□□□□ -1.14
CDHR3-208ENST00000471910 FCGRTP55899 365 aa7.94□□□□□ -1.14
CDHR3-208ENST00000471910 PRRT3Q5FWE3 981 aa7.94□□□□□ -1.14
CDHR3-208ENST00000471910 MAP4K3Q8IVH8 894 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms