RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 FOXD4L6Q3SYB3 417 aaPredicted RBP20.65■□□□□ 0.9
RRP1-202ENST00000471909 FOXD4L3Q6VB84 417 aaPredicted RBP20.65■□□□□ 0.9
RRP1-202ENST00000471909 CCDC39Q9UFE4 941 aa20.65■□□□□ 0.9
RRP1-202ENST00000471909 ZSCAN22P10073 491 aaPredicted RBP20.64■□□□□ 0.9
RRP1-202ENST00000471909 ATP2B3Q16720 1220 aa20.64■□□□□ 0.9
RRP1-202ENST00000471909 NEK1Q96PY6 1258 aa20.64■□□□□ 0.89
RRP1-202ENST00000471909 CNNM1Q9NRU3 951 aa20.64■□□□□ 0.89
RRP1-202ENST00000471909 MAST3O60307 1309 aa20.64■□□□□ 0.89
RRP1-202ENST00000471909 KCNQ2O43526 872 aa20.63■□□□□ 0.89
RRP1-202ENST00000471909 SUSD4Q5VX71 490 aa20.63■□□□□ 0.89
RRP1-202ENST00000471909 VGLL2Q8N8G2 317 aa20.63■□□□□ 0.89
RRP1-202ENST00000471909 MAP7D2Q96T17 732 aa20.63■□□□□ 0.89
RRP1-202ENST00000471909 DSCC1Q9BVC3 393 aa20.63■□□□□ 0.89
RRP1-202ENST00000471909 NSFL1CQ9UNZ2 370 aaKnown RBP20.63■□□□□ 0.89
RRP1-202ENST00000471909 NWD2Q9ULI1 1742 aa20.63■□□□□ 0.89
RRP1-202ENST00000471909 SPEF2Q9C093 1822 aa20.63■□□□□ 0.89
RRP1-202ENST00000471909 UQCRHLA0A096LP55 91 aa20.62■□□□□ 0.89
RRP1-202ENST00000471909 CAMTA2O94983 1202 aa20.62■□□□□ 0.89
RRP1-202ENST00000471909 UQCRHP07919 91 aa20.62■□□□□ 0.89
RRP1-202ENST00000471909 HSPD1P10809 573 aaKnown RBP20.62■□□□□ 0.89
RRP1-202ENST00000471909 ZAP70P43403 619 aa20.62■□□□□ 0.89
RRP1-202ENST00000471909 OSBP2Q969R2 916 aa20.62■□□□□ 0.89
RRP1-202ENST00000471909 FAM13BQ9NYF5 915 aa20.62■□□□□ 0.89
RRP1-202ENST00000471909 M0R2C6 588 aa20.61■□□□□ 0.89
RRP1-202ENST00000471909 PI16Q6UXB8 463 aa20.61■□□□□ 0.89
RRP1-202ENST00000471909 STOX1Q6ZVD7 989 aa20.61■□□□□ 0.89
RRP1-202ENST00000471909 HCLS1P14317 486 aaPredicted RBP20.61■□□□□ 0.89
RRP1-202ENST00000471909 GDPD2Q9HCC8 539 aa20.61■□□□□ 0.89
RRP1-202ENST00000471909 FAM98CQ17RN3 349 aaKnown RBP20.6■□□□□ 0.89
RRP1-202ENST00000471909 FAM177BA6PVY3 158 aa20.6■□□□□ 0.89
RRP1-202ENST00000471909 PDE8BO95263 885 aa20.6■□□□□ 0.89
RRP1-202ENST00000471909 F13A1P00488 732 aa20.6■□□□□ 0.89
RRP1-202ENST00000471909 RNF214Q8ND24 703 aa20.6■□□□□ 0.89
RRP1-202ENST00000471909 AK7Q96M32 723 aa20.6■□□□□ 0.89
RRP1-202ENST00000471909 MTMR6Q9Y217 621 aa20.6■□□□□ 0.89
RRP1-202ENST00000471909 MYH3P11055 1940 aa20.59■□□□□ 0.89
RRP1-202ENST00000471909 ABCC12Q96J65 1359 aa20.59■□□□□ 0.89
RRP1-202ENST00000471909 A0A0G2JLW4 131 aa20.59■□□□□ 0.89
RRP1-202ENST00000471909 MCAMP43121 646 aa20.59■□□□□ 0.89
RRP1-202ENST00000471909 UTP14AQ9BVJ6 771 aaKnown RBP20.59■□□□□ 0.89
RRP1-202ENST00000471909 LRRFIP1Q32MZ4 808 aaKnown RBP20.58■□□□□ 0.89
RRP1-202ENST00000471909 USP48Q86UV5 1035 aa20.58■□□□□ 0.89
RRP1-202ENST00000471909 SMARCC1Q92922 1105 aaPredicted RBP20.58■□□□□ 0.89
RRP1-202ENST00000471909 RREB1Q92766 1687 aa20.58■□□□□ 0.88
RRP1-202ENST00000471909 ZFYP08048 801 aaPredicted RBP20.58■□□□□ 0.88
RRP1-202ENST00000471909 Q6ZUG5 572 aa20.58■□□□□ 0.88
RRP1-202ENST00000471909 SYAP1Q96A49 352 aaPredicted RBP20.58■□□□□ 0.88
RRP1-202ENST00000471909 STK3Q13188 491 aa20.57■□□□□ 0.88
RRP1-202ENST00000471909 C8orf37Q96NL8 207 aa20.57■□□□□ 0.88
RRP1-202ENST00000471909 TSPY26PQ9H489 355 aa20.57■□□□□ 0.88
RRP1-202ENST00000471909 MYH14Q7Z406 1995 aaKnown RBP20.57■□□□□ 0.88
RRP1-202ENST00000471909 WASHC4Q2M389 1173 aa20.57■□□□□ 0.88
RRP1-202ENST00000471909 ZNF512BQ96KM6 892 aaPredicted RBP20.57■□□□□ 0.88
RRP1-202ENST00000471909 BCL9LQ86UU0 1499 aa20.56■□□□□ 0.88
RRP1-202ENST00000471909 GADD45BO75293 160 aaPredicted RBP20.56■□□□□ 0.88
RRP1-202ENST00000471909 PARP10Q53GL7 1025 aa20.56■□□□□ 0.88
RRP1-202ENST00000471909 NGLY1Q96IV0 654 aa20.56■□□□□ 0.88
RRP1-202ENST00000471909 CNPY2Q9Y2B0 182 aa20.56■□□□□ 0.88
RRP1-202ENST00000471909 CICQ96RK0 1608 aaPredicted RBP20.56■□□□□ 0.88
RRP1-202ENST00000471909 FOXP2O15409 715 aa20.56■□□□□ 0.88
RRP1-202ENST00000471909 PTMAP06454 111 aaKnown RBP20.56■□□□□ 0.88
RRP1-202ENST00000471909 TMEM87AQ8NBN3 555 aa20.56■□□□□ 0.88
RRP1-202ENST00000471909 HELBQ8NG08 1087 aaPredicted RBP20.56■□□□□ 0.88
RRP1-202ENST00000471909 LRRC2Q9BYS8 371 aa20.56■□□□□ 0.88
RRP1-202ENST00000471909 NIP7Q9Y221 180 aaKnown RBP eCLIP20.56■□□□□ 0.88
RRP1-202ENST00000471909 UBAP1LF5GYI3 381 aa20.55■□□□□ 0.88
RRP1-202ENST00000471909 DYNC1I1O14576 645 aa20.55■□□□□ 0.88
RRP1-202ENST00000471909 HMGB1P09429 215 aaKnown RBP20.55■□□□□ 0.88
RRP1-202ENST00000471909 VPS72Q15906 364 aa20.55■□□□□ 0.88
RRP1-202ENST00000471909 LRP5O75197 1615 aa20.55■□□□□ 0.88
RRP1-202ENST00000471909 LARP1BQ659C4 914 aaKnown RBP20.55■□□□□ 0.88
RRP1-202ENST00000471909 TTLL5Q6EMB2 1281 aa20.55■□□□□ 0.88
RRP1-202ENST00000471909 SASS6Q6UVJ0 657 aa20.55■□□□□ 0.88
RRP1-202ENST00000471909 DHX32Q7L7V1 743 aaKnown RBP20.55■□□□□ 0.88
RRP1-202ENST00000471909 APPBP2Q92624 585 aa20.55■□□□□ 0.88
RRP1-202ENST00000471909 PUS7LQ9H0K6 701 aaKnown RBP20.55■□□□□ 0.88
RRP1-202ENST00000471909 SEC31BQ9NQW1 1179 aa20.55■□□□□ 0.88
RRP1-202ENST00000471909 ATP6V1DQ9Y5K8 247 aa20.55■□□□□ 0.88
RRP1-202ENST00000471909 MROH5Q6ZUA9 1318 aa20.54■□□□□ 0.88
RRP1-202ENST00000471909 VPS37CA5D8V6 355 aaPredicted RBP20.54■□□□□ 0.88
RRP1-202ENST00000471909 E7EWF7 191 aa20.54■□□□□ 0.88
RRP1-202ENST00000471909 NTSR2O95665 410 aa20.54■□□□□ 0.88
RRP1-202ENST00000471909 FGFR2P21802 821 aa20.54■□□□□ 0.88
RRP1-202ENST00000471909 CCDC102BQ68D86 513 aa20.54■□□□□ 0.88
RRP1-202ENST00000471909 PHKA1P46020 1223 aa20.54■□□□□ 0.88
RRP1-202ENST00000471909 PUM3Q15397 648 aaKnown RBP20.54■□□□□ 0.88
RRP1-202ENST00000471909 BRF1Q92994 677 aa20.54■□□□□ 0.88
RRP1-202ENST00000471909 GTF3C6Q969F1 213 aa20.54■□□□□ 0.88
RRP1-202ENST00000471909 EXOSC10Q01780 885 aaKnown RBP20.53■□□□□ 0.88
RRP1-202ENST00000471909 MTERF4Q7Z6M4 381 aaKnown RBP20.53■□□□□ 0.88
RRP1-202ENST00000471909 LPIN2Q92539 896 aa20.53■□□□□ 0.88
RRP1-202ENST00000471909 PHF14O94880 888 aa20.53■□□□□ 0.88
RRP1-202ENST00000471909 LINC00116Q8NCU8 138 aa20.53■□□□□ 0.88
RRP1-202ENST00000471909 ARID4AP29374 1257 aaPredicted RBP20.52■□□□□ 0.88
RRP1-202ENST00000471909 PDCP20941 246 aa20.52■□□□□ 0.87
RRP1-202ENST00000471909 KCNQ4P56696 695 aa20.52■□□□□ 0.87
RRP1-202ENST00000471909 KIAA2012Q0VF49 1180 aa20.52■□□□□ 0.87
RRP1-202ENST00000471909 AKAP11Q9UKA4 1901 aa20.51■□□□□ 0.87
RRP1-202ENST00000471909 SNAP23O00161 211 aa20.51■□□□□ 0.87
RRP1-202ENST00000471909 HSP90B1P14625 803 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms