RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 SCN9AQ15858 1988 aa16.64■□□□□ 0.25
LTA-215ENST00000471842 TAF5LO75529 589 aa16.63■□□□□ 0.25
LTA-215ENST00000471842 ALDH1L1O75891 902 aa16.63■□□□□ 0.25
LTA-215ENST00000471842 PODNQ7Z5L7 613 aa16.63■□□□□ 0.25
LTA-215ENST00000471842 TXNRD3Q86VQ6 643 aa16.63■□□□□ 0.25
LTA-215ENST00000471842 MRPL50Q8N5N7 158 aaKnown RBP16.63■□□□□ 0.25
LTA-215ENST00000471842 ZNF594Q96JF6 807 aaPredicted RBP16.63■□□□□ 0.25
LTA-215ENST00000471842 CAPNS2Q96L46 248 aa16.63■□□□□ 0.25
LTA-215ENST00000471842 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
LTA-215ENST00000471842 SLFN5Q08AF3 891 aa16.62■□□□□ 0.25
LTA-215ENST00000471842 AGBL3Q8NEM8 1001 aa16.62■□□□□ 0.25
LTA-215ENST00000471842 CNNM1Q9NRU3 951 aa16.62■□□□□ 0.25
LTA-215ENST00000471842 PGAP2Q9UHJ9 254 aa16.62■□□□□ 0.25
LTA-215ENST00000471842 TLL2Q9Y6L7 1015 aa16.62■□□□□ 0.25
LTA-215ENST00000471842 ASTN2O75129 1339 aaPredicted RBP16.62■□□□□ 0.25
LTA-215ENST00000471842 FOXN1O15353 648 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 USP17L8P0C7I0 530 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 ECE1P42892 770 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 SULF1Q8IWU6 871 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 TNS4Q8IZW8 715 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 SSH1Q8WYL5 1049 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 SUCLG2Q96I99 432 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 COA1Q9GZY4 146 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 SMC4Q9NTJ3 1288 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 TRPM7Q96QT4 1865 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 PCNTO95613 3336 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 CCER2I3L3R5 266 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 SNAP23O00161 211 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 CAPN15O75808 1086 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 MYOZ2Q9NPC6 264 aa16.61■□□□□ 0.25
LTA-215ENST00000471842 NBPF7P0C2Y1 421 aaPredicted RBP16.6■□□□□ 0.25
LTA-215ENST00000471842 SCARF1Q14162 830 aa16.6■□□□□ 0.25
LTA-215ENST00000471842 ANGEL2Q5VTE6 544 aaKnown RBP16.6■□□□□ 0.25
LTA-215ENST00000471842 LDHAL6AQ6ZMR3 332 aa16.6■□□□□ 0.25
LTA-215ENST00000471842 PTPRCP08575 1304 aa16.59■□□□□ 0.25
LTA-215ENST00000471842 AOC2O75106 756 aa16.59■□□□□ 0.25
LTA-215ENST00000471842 ZNF280AP59817 542 aaPredicted RBP16.59■□□□□ 0.25
LTA-215ENST00000471842 SAPCD2Q86UD0 394 aa16.59■□□□□ 0.25
LTA-215ENST00000471842 OGFOD1Q8N543 542 aa16.59■□□□□ 0.25
LTA-215ENST00000471842 BEGAINQ9BUH8 593 aa16.59■□□□□ 0.25
LTA-215ENST00000471842 SCAF8Q9UPN6 1271 aaKnown RBP16.59■□□□□ 0.25
LTA-215ENST00000471842 HUNKP57058 714 aa16.58■□□□□ 0.24
LTA-215ENST00000471842 GTF2IP78347 998 aa16.58■□□□□ 0.24
LTA-215ENST00000471842 DACT2Q5SW24 774 aa16.58■□□□□ 0.24
LTA-215ENST00000471842 TTLL5Q6EMB2 1281 aa16.58■□□□□ 0.24
LTA-215ENST00000471842 ZNF804AQ7Z570 1209 aa16.58■□□□□ 0.24
LTA-215ENST00000471842 KIAA0825Q8IV33 1275 aa16.58■□□□□ 0.24
LTA-215ENST00000471842 PSME4Q14997 1843 aa16.57■□□□□ 0.24
LTA-215ENST00000471842 SASH1O94885 1247 aa16.57■□□□□ 0.24
LTA-215ENST00000471842 MAP2K1Q02750 393 aaPredicted RBP16.57■□□□□ 0.24
LTA-215ENST00000471842 STRIP1Q5VSL9 837 aa16.57■□□□□ 0.24
LTA-215ENST00000471842 BICC1Q9H694 974 aaKnown RBP16.57■□□□□ 0.24
LTA-215ENST00000471842 JAG2Q9Y219 1238 aa16.57■□□□□ 0.24
LTA-215ENST00000471842 MYO3BQ8WXR4 1341 aa16.57■□□□□ 0.24
LTA-215ENST00000471842 ZNF609O15014 1411 aa16.57■□□□□ 0.24
LTA-215ENST00000471842 CTCFP49711 727 aaPredicted RBP16.56■□□□□ 0.24
LTA-215ENST00000471842 C2orf69Q8N8R5 385 aa16.56■□□□□ 0.24
LTA-215ENST00000471842 CDCA5Q96FF9 252 aa16.56■□□□□ 0.24
LTA-215ENST00000471842 GMLQ99445 158 aa16.56■□□□□ 0.24
LTA-215ENST00000471842 GBA2Q9HCG7 927 aaPredicted RBP16.56■□□□□ 0.24
LTA-215ENST00000471842 WBP1LQ9NX94 342 aa16.56■□□□□ 0.24
LTA-215ENST00000471842 F8W031 263 aaPredicted RBP16.55■□□□□ 0.24
LTA-215ENST00000471842 LBX1P52954 281 aa16.55■□□□□ 0.24
LTA-215ENST00000471842 NBPF9Q3BBW0 867 aa16.55■□□□□ 0.24
LTA-215ENST00000471842 CD209Q9NNX6 404 aa16.55■□□□□ 0.24
LTA-215ENST00000471842 HDAC9Q9UKV0 1011 aa16.55■□□□□ 0.24
LTA-215ENST00000471842 A0A1B0GUL6 1792 aa16.55■□□□□ 0.24
LTA-215ENST00000471842 ALDH1L2Q3SY69 923 aa16.54■□□□□ 0.24
LTA-215ENST00000471842 KAZALD1Q96I82 304 aa16.54■□□□□ 0.24
LTA-215ENST00000471842 PUS3Q9BZE2 481 aaKnown RBP16.54■□□□□ 0.24
LTA-215ENST00000471842 TSKSQ9UJT2 592 aa16.54■□□□□ 0.24
LTA-215ENST00000471842 THSD7BQ9C0I4 1608 aa16.54■□□□□ 0.24
LTA-215ENST00000471842 UTYO14607 1347 aa16.53■□□□□ 0.24
LTA-215ENST00000471842 TTLL12Q14166 644 aaPredicted RBP16.53■□□□□ 0.24
LTA-215ENST00000471842 PRAMEF18Q5VWM3 479 aa16.53■□□□□ 0.24
LTA-215ENST00000471842 NOB1Q9ULX3 412 aaKnown RBP16.53■□□□□ 0.24
LTA-215ENST00000471842 ZNF157P51786 506 aaPredicted RBP16.52■□□□□ 0.23
LTA-215ENST00000471842 METTL24Q5JXM2 366 aa16.52■□□□□ 0.23
LTA-215ENST00000471842 ANKRD44Q8N8A2 993 aa16.52■□□□□ 0.23
LTA-215ENST00000471842 KLHDC4Q8TBB5 520 aa16.52■□□□□ 0.23
LTA-215ENST00000471842 ZNF646O15015 1829 aaPredicted RBP16.52■□□□□ 0.23
LTA-215ENST00000471842 HSPA8P11142 646 aaKnown RBP16.51■□□□□ 0.23
LTA-215ENST00000471842 GYG1P46976 350 aa16.51■□□□□ 0.23
LTA-215ENST00000471842 LRRC24Q50LG9 513 aa16.51■□□□□ 0.23
LTA-215ENST00000471842 RGMBQ6NW40 437 aa16.51■□□□□ 0.23
LTA-215ENST00000471842 VPS37DQ86XT2 251 aa16.51■□□□□ 0.23
LTA-215ENST00000471842 HHIPL1Q96JK4 782 aa16.51■□□□□ 0.23
LTA-215ENST00000471842 MROH5Q6ZUA9 1318 aa16.5■□□□□ 0.23
LTA-215ENST00000471842 PITPNM2Q9BZ72 1349 aa16.5■□□□□ 0.23
LTA-215ENST00000471842 IRS2Q9Y4H2 1338 aa16.5■□□□□ 0.23
LTA-215ENST00000471842 WNT10BO00744 389 aa16.5■□□□□ 0.23
LTA-215ENST00000471842 MAP2K2P36507 400 aa16.5■□□□□ 0.23
LTA-215ENST00000471842 RBM5P52756 815 aaKnown RBP eCLIP16.5■□□□□ 0.23
LTA-215ENST00000471842 DIEXFQ68CQ4 756 aaKnown RBP16.5■□□□□ 0.23
LTA-215ENST00000471842 USP44Q9H0E7 712 aa16.5■□□□□ 0.23
LTA-215ENST00000471842 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.5■□□□□ 0.23
LTA-215ENST00000471842 FRAT2O75474 233 aaPredicted RBP16.49■□□□□ 0.23
LTA-215ENST00000471842 CT47B1P0C2W7 299 aaPredicted RBP16.49■□□□□ 0.23
LTA-215ENST00000471842 UBTFL1P0CB47 393 aaPredicted RBP16.49■□□□□ 0.23
LTA-215ENST00000471842 DLGAP5Q15398 846 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms