RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 ZNF408Q9H9D4 720 aa23.94■■□□□ 1.42
COMMD1-207ENST00000471704 CCT4P50991 539 aaKnown RBP23.93■■□□□ 1.42
COMMD1-207ENST00000471704 FOXO4P98177 505 aa23.93■■□□□ 1.42
COMMD1-207ENST00000471704 GRM1Q13255 1194 aa23.93■■□□□ 1.42
COMMD1-207ENST00000471704 TRMT2AQ8IZ69 625 aaKnown RBP23.93■■□□□ 1.42
COMMD1-207ENST00000471704 DCPSQ96C86 337 aaKnown RBP23.93■■□□□ 1.42
COMMD1-207ENST00000471704 USP17L3A6NCW0 530 aa23.92■■□□□ 1.42
COMMD1-207ENST00000471704 USP17L4A6NCW7 530 aa23.92■■□□□ 1.42
COMMD1-207ENST00000471704 ITGA6P23229 1130 aa23.92■■□□□ 1.42
COMMD1-207ENST00000471704 USP17L1Q7RTZ2 530 aa23.92■■□□□ 1.42
COMMD1-207ENST00000471704 ASTN2O75129 1339 aaPredicted RBP23.91■■□□□ 1.42
COMMD1-207ENST00000471704 ADM5C9JUS6 153 aa23.91■■□□□ 1.42
COMMD1-207ENST00000471704 LEMD3Q9Y2U8 911 aa23.91■■□□□ 1.42
COMMD1-207ENST00000471704 IGHMBP2P38935 993 aaKnown RBP23.9■■□□□ 1.42
COMMD1-207ENST00000471704 EPHA10Q5JZY3 1008 aa23.9■■□□□ 1.42
COMMD1-207ENST00000471704 SSH1Q8WYL5 1049 aa23.9■■□□□ 1.42
COMMD1-207ENST00000471704 USP17L8P0C7I0 530 aa23.89■■□□□ 1.41
COMMD1-207ENST00000471704 SLC4A10Q6U841 1118 aa23.89■■□□□ 1.41
COMMD1-207ENST00000471704 TXNRD3Q86VQ6 643 aa23.89■■□□□ 1.41
COMMD1-207ENST00000471704 GGA3Q9NZ52 723 aa23.89■■□□□ 1.41
COMMD1-207ENST00000471704 GRM8O00222 908 aa23.88■■□□□ 1.41
COMMD1-207ENST00000471704 HUNKP57058 714 aa23.88■■□□□ 1.41
COMMD1-207ENST00000471704 SCARF1Q14162 830 aa23.88■■□□□ 1.41
COMMD1-207ENST00000471704 DACT2Q5SW24 774 aa23.88■■□□□ 1.41
COMMD1-207ENST00000471704 BEGAINQ9BUH8 593 aa23.88■■□□□ 1.41
COMMD1-207ENST00000471704 ANKRD2Q9GZV1 360 aa23.88■■□□□ 1.41
COMMD1-207ENST00000471704 GBA2Q9HCG7 927 aaPredicted RBP23.88■■□□□ 1.41
COMMD1-207ENST00000471704 ALDH1L1O75891 902 aa23.87■■□□□ 1.41
COMMD1-207ENST00000471704 BRPF1P55201 1214 aaPredicted RBP23.87■■□□□ 1.41
COMMD1-207ENST00000471704 SULF1Q8IWU6 871 aa23.87■■□□□ 1.41
COMMD1-207ENST00000471704 MPHOSPH8Q99549 860 aa23.87■■□□□ 1.41
COMMD1-207ENST00000471704 SRCIN1Q9C0H9 1055 aa23.87■■□□□ 1.41
COMMD1-207ENST00000471704 COA1Q9GZY4 146 aa23.87■■□□□ 1.41
COMMD1-207ENST00000471704 MYOZ2Q9NPC6 264 aa23.87■■□□□ 1.41
COMMD1-207ENST00000471704 ZNF804BA4D1E1 1349 aa23.86■■□□□ 1.41
COMMD1-207ENST00000471704 C2orf69Q8N8R5 385 aa23.86■■□□□ 1.41
COMMD1-207ENST00000471704 NOGQ13253 232 aa23.85■■□□□ 1.41
COMMD1-207ENST00000471704 STRIP1Q5VSL9 837 aa23.85■■□□□ 1.41
COMMD1-207ENST00000471704 ANGEL2Q5VTE6 544 aaKnown RBP23.85■■□□□ 1.41
COMMD1-207ENST00000471704 KAZALD1Q96I82 304 aa23.85■■□□□ 1.41
COMMD1-207ENST00000471704 ZIC5Q96T25 663 aa23.85■■□□□ 1.41
COMMD1-207ENST00000471704 ANKRD18BA2A2Z9 1011 aa23.84■■□□□ 1.41
COMMD1-207ENST00000471704 FAM155AB1AL88 458 aaPredicted RBP23.84■■□□□ 1.41
COMMD1-207ENST00000471704 CA12O43570 354 aa23.84■■□□□ 1.41
COMMD1-207ENST00000471704 KLRK1P26718 216 aa23.84■■□□□ 1.41
COMMD1-207ENST00000471704 CHRNDQ07001 517 aa23.84■■□□□ 1.41
COMMD1-207ENST00000471704 RGMBQ6NW40 437 aa23.84■■□□□ 1.41
COMMD1-207ENST00000471704 LMBR1LQ6UX01 489 aa23.84■■□□□ 1.41
COMMD1-207ENST00000471704 CDCA5Q96FF9 252 aa23.84■■□□□ 1.41
COMMD1-207ENST00000471704 MXD3Q9BW11 206 aa23.84■■□□□ 1.41
COMMD1-207ENST00000471704 PTPRCP08575 1304 aa23.84■■□□□ 1.41
COMMD1-207ENST00000471704 PITPNM2Q9BZ72 1349 aa23.84■■□□□ 1.41
COMMD1-207ENST00000471704 NBPF7P0C2Y1 421 aaPredicted RBP23.83■■□□□ 1.41
COMMD1-207ENST00000471704 SUCLG2Q96I99 432 aa23.83■■□□□ 1.41
COMMD1-207ENST00000471704 UTYO14607 1347 aa23.83■■□□□ 1.4
COMMD1-207ENST00000471704 MYO3BQ8WXR4 1341 aa23.83■■□□□ 1.4
COMMD1-207ENST00000471704 IRS2Q9Y4H2 1338 aa23.83■■□□□ 1.4
COMMD1-207ENST00000471704 MIER1Q8N108 512 aa23.82■■□□□ 1.4
COMMD1-207ENST00000471704 C9orf78Q9NZ63 289 aaPredicted RBP23.82■■□□□ 1.4
COMMD1-207ENST00000471704 MMP14P50281 582 aa23.81■■□□□ 1.4
COMMD1-207ENST00000471704 IFIT5Q13325 482 aaKnown RBP23.81■■□□□ 1.4
COMMD1-207ENST00000471704 ALDH1L2Q3SY69 923 aa23.81■■□□□ 1.4
COMMD1-207ENST00000471704 CCDC102AQ96A19 550 aa23.81■■□□□ 1.4
COMMD1-207ENST00000471704 ZNF594Q96JF6 807 aaPredicted RBP23.81■■□□□ 1.4
COMMD1-207ENST00000471704 TSKSQ9UJT2 592 aa23.81■■□□□ 1.4
COMMD1-207ENST00000471704 CHMP3Q9Y3E7 222 aa23.81■■□□□ 1.4
COMMD1-207ENST00000471704 SNAP23O00161 211 aa23.8■■□□□ 1.4
COMMD1-207ENST00000471704 NBPF9Q3BBW0 867 aa23.8■■□□□ 1.4
COMMD1-207ENST00000471704 TTLL5Q6EMB2 1281 aa23.8■■□□□ 1.4
COMMD1-207ENST00000471704 C15orf52Q6ZUT6 534 aaKnown RBP23.8■■□□□ 1.4
COMMD1-207ENST00000471704 OGFOD1Q8N543 542 aa23.79■■□□□ 1.4
COMMD1-207ENST00000471704 CASP8AP2Q9UKL3 1982 aa23.79■■□□□ 1.4
COMMD1-207ENST00000471704 TAF5LO75529 589 aa23.78■■□□□ 1.4
COMMD1-207ENST00000471704 ZNF157P51786 506 aaPredicted RBP23.78■■□□□ 1.4
COMMD1-207ENST00000471704 DIEXFQ68CQ4 756 aaKnown RBP23.78■■□□□ 1.4
COMMD1-207ENST00000471704 HELBQ8NG08 1087 aaPredicted RBP23.78■■□□□ 1.4
COMMD1-207ENST00000471704 CD209Q9NNX6 404 aa23.78■■□□□ 1.4
COMMD1-207ENST00000471704 SMC4Q9NTJ3 1288 aa23.78■■□□□ 1.4
COMMD1-207ENST00000471704 WNT10BO00744 389 aa23.77■■□□□ 1.4
COMMD1-207ENST00000471704 KCNJ4P48050 445 aa23.77■■□□□ 1.4
COMMD1-207ENST00000471704 FKBP1BP68106 108 aa23.77■■□□□ 1.4
COMMD1-207ENST00000471704 FBXW7Q969H0 707 aa23.77■■□□□ 1.4
COMMD1-207ENST00000471704 PAPPA2Q9BXP8 1791 aa23.76■■□□□ 1.39
COMMD1-207ENST00000471704 SLC10A3P09131 477 aa23.76■■□□□ 1.39
COMMD1-207ENST00000471704 GTF2IP78347 998 aa23.76■■□□□ 1.39
COMMD1-207ENST00000471704 CCDC57Q2TAC2 916 aa23.76■■□□□ 1.39
COMMD1-207ENST00000471704 ANKRD44Q8N8A2 993 aa23.76■■□□□ 1.39
COMMD1-207ENST00000471704 ABHD8Q96I13 439 aa23.76■■□□□ 1.39
COMMD1-207ENST00000471704 ZBED3Q96IU2 234 aaPredicted RBP23.76■■□□□ 1.39
COMMD1-207ENST00000471704 BICC1Q9H694 974 aaKnown RBP23.76■■□□□ 1.39
COMMD1-207ENST00000471704 SCAF8Q9UPN6 1271 aaKnown RBP23.76■■□□□ 1.39
COMMD1-207ENST00000471704 CT47B1P0C2W7 299 aaPredicted RBP23.75■■□□□ 1.39
COMMD1-207ENST00000471704 KIF23Q02241 960 aaPredicted RBP23.75■■□□□ 1.39
COMMD1-207ENST00000471704 RABL6Q3YEC7 729 aaPredicted RBP23.75■■□□□ 1.39
COMMD1-207ENST00000471704 KIAA0825Q8IV33 1275 aa23.74■■□□□ 1.39
COMMD1-207ENST00000471704 USP44Q9H0E7 712 aa23.74■■□□□ 1.39
COMMD1-207ENST00000471704 AKAP11Q9UKA4 1901 aa23.73■■□□□ 1.39
COMMD1-207ENST00000471704 IL1R1P14778 569 aa23.73■■□□□ 1.39
COMMD1-207ENST00000471704 LDHAL6AQ6ZMR3 332 aa23.73■■□□□ 1.39
COMMD1-207ENST00000471704 PUS3Q9BZE2 481 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms