RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 ATP2B4P23634 1241 aa35.49■■■■□ 3.27
SOD1-203ENST00000470944 C6orf229H3BNL8 230 aa35.48■■■■□ 3.27
SOD1-203ENST00000470944 IFIT2P09913 472 aaKnown RBP35.48■■■■□ 3.27
SOD1-203ENST00000470944 XAGE2Q96GT9 111 aa35.48■■■■□ 3.27
SOD1-203ENST00000470944 TXNRD3Q86VQ6 643 aa35.47■■■■□ 3.27
SOD1-203ENST00000470944 IRS2Q9Y4H2 1338 aa35.47■■■■□ 3.27
SOD1-203ENST00000470944 SLC5A1P13866 664 aa35.46■■■■□ 3.27
SOD1-203ENST00000470944 RTKN2Q8IZC4 609 aa35.46■■■■□ 3.27
SOD1-203ENST00000470944 IFIT1P09914 478 aaKnown RBP35.45■■■■□ 3.27
SOD1-203ENST00000470944 SOGA3Q5TF21 947 aa35.45■■■■□ 3.27
SOD1-203ENST00000470944 RTFDC1Q9BY42 306 aaPredicted RBP35.45■■■■□ 3.27
SOD1-203ENST00000470944 SALL3Q9BXA9 1300 aa35.45■■■■□ 3.27
SOD1-203ENST00000470944 YBX3P16989 372 aaKnown RBP eCLIP35.43■■■■□ 3.26
SOD1-203ENST00000470944 TSHZ3Q63HK5 1081 aa35.43■■■■□ 3.26
SOD1-203ENST00000470944 PELP1Q8IZL8 1130 aaKnown RBP35.43■■■■□ 3.26
SOD1-203ENST00000470944 GYG1P46976 350 aa35.42■■■■□ 3.26
SOD1-203ENST00000470944 ARFGEF1Q9Y6D6 1849 aa35.42■■■■□ 3.26
SOD1-203ENST00000470944 GRIPAP1Q4V328 841 aa35.41■■■■□ 3.26
SOD1-203ENST00000470944 NFKBIEO00221 500 aa35.4■■■■□ 3.26
SOD1-203ENST00000470944 BCAMP50895 628 aa35.4■■■■□ 3.26
SOD1-203ENST00000470944 PLEKHM2Q8IWE5 1019 aa35.4■■■■□ 3.26
SOD1-203ENST00000470944 ARAP2Q8WZ64 1704 aa35.4■■■■□ 3.26
SOD1-203ENST00000470944 RIMBP2O15034 1052 aa35.4■■■■□ 3.26
SOD1-203ENST00000470944 MX1P20591 662 aa35.4■■■■□ 3.26
SOD1-203ENST00000470944 FAM84BQ96KN1 310 aaPredicted RBP35.4■■■■□ 3.26
SOD1-203ENST00000470944 PSMD1Q99460 953 aa35.4■■■■□ 3.26
SOD1-203ENST00000470944 MED23Q9ULK4 1368 aa35.39■■■■□ 3.26
SOD1-203ENST00000470944 PHKA1P46020 1223 aa35.38■■■■□ 3.25
SOD1-203ENST00000470944 FKBP4Q02790 459 aaKnown RBP eCLIP35.38■■■■□ 3.25
SOD1-203ENST00000470944 WASHC4Q2M389 1173 aa35.38■■■■□ 3.25
SOD1-203ENST00000470944 GORABQ5T7V8 394 aa35.38■■■■□ 3.25
SOD1-203ENST00000470944 C15orf52Q6ZUT6 534 aaKnown RBP35.38■■■■□ 3.25
SOD1-203ENST00000470944 RGS3P49796 1198 aa35.37■■■■□ 3.25
SOD1-203ENST00000470944 CCDC102BQ68D86 513 aa35.37■■■■□ 3.25
SOD1-203ENST00000470944 PDE1AP54750 535 aa35.37■■■■□ 3.25
SOD1-203ENST00000470944 ZNF277Q9NRM2 450 aaPredicted RBP35.37■■■■□ 3.25
SOD1-203ENST00000470944 FBXO33Q7Z6M2 555 aa35.36■■■■□ 3.25
SOD1-203ENST00000470944 ZC3H12CQ9C0D7 883 aaKnown RBP35.36■■■■□ 3.25
SOD1-203ENST00000470944 FER1L6Q2WGJ9 1857 aa35.36■■■■□ 3.25
SOD1-203ENST00000470944 TAOK3Q9H2K8 898 aa35.35■■■■□ 3.25
SOD1-203ENST00000470944 ECHDC1Q9NTX5 307 aa35.35■■■■□ 3.25
SOD1-203ENST00000470944 STAP2Q9UGK3 403 aa35.35■■■■□ 3.25
SOD1-203ENST00000470944 RASSF7Q02833 373 aa35.35■■■■□ 3.25
SOD1-203ENST00000470944 AOC3Q16853 763 aa35.35■■■■□ 3.25
SOD1-203ENST00000470944 CAVIN4Q5BKX8 364 aa35.35■■■■□ 3.25
SOD1-203ENST00000470944 SUPT20HQ8NEM7 779 aa35.35■■■■□ 3.25
SOD1-203ENST00000470944 EYA3Q99504 573 aa35.35■■■■□ 3.25
SOD1-203ENST00000470944 HIBADHP31937 336 aaKnown RBP35.34■■■■□ 3.25
SOD1-203ENST00000470944 CCDC158Q5M9N0 1113 aa35.33■■■■□ 3.25
SOD1-203ENST00000470944 ARHGAP27Q6ZUM4 889 aa35.33■■■■□ 3.25
SOD1-203ENST00000470944 PI4K2BQ8TCG2 481 aa35.32■■■■□ 3.25
SOD1-203ENST00000470944 IQSEC3Q9UPP2 1182 aaPredicted RBP35.32■■■■□ 3.25
SOD1-203ENST00000470944 PRELPP51888 382 aa35.32■■■■□ 3.24
SOD1-203ENST00000470944 KIAA2012Q0VF49 1180 aa35.32■■■■□ 3.24
SOD1-203ENST00000470944 SCARF1Q14162 830 aa35.32■■■■□ 3.24
SOD1-203ENST00000470944 TTC39AQ5SRH9 613 aa35.32■■■■□ 3.24
SOD1-203ENST00000470944 VPS37DQ86XT2 251 aa35.32■■■■□ 3.24
SOD1-203ENST00000470944 TTC41PQ6P2S7 1318 aa35.31■■■■□ 3.24
SOD1-203ENST00000470944 PPIP5K2O43314 1243 aa35.31■■■■□ 3.24
SOD1-203ENST00000470944 DOK7Q18PE1 504 aa35.31■■■■□ 3.24
SOD1-203ENST00000470944 GPATCH3Q96I76 525 aa35.31■■■■□ 3.24
SOD1-203ENST00000470944 GPR162Q16538 588 aa35.3■■■■□ 3.24
SOD1-203ENST00000470944 OSBPL3Q9H4L5 887 aa35.3■■■■□ 3.24
SOD1-203ENST00000470944 LTBP3Q9NS15 1303 aa35.3■■■■□ 3.24
SOD1-203ENST00000470944 ZNF804AQ7Z570 1209 aa35.29■■■■□ 3.24
SOD1-203ENST00000470944 ATP5JP18859 108 aa35.29■■■■□ 3.24
SOD1-203ENST00000470944 ARID4AP29374 1257 aaPredicted RBP35.29■■■■□ 3.24
SOD1-203ENST00000470944 CD209Q9NNX6 404 aa35.29■■■■□ 3.24
SOD1-203ENST00000470944 COL4A5P29400 1685 aa35.28■■■■□ 3.24
SOD1-203ENST00000470944 PI16Q6UXB8 463 aa35.28■■■■□ 3.24
SOD1-203ENST00000470944 BOLA2Q9H3K6 86 aa35.28■■■■□ 3.24
SOD1-203ENST00000470944 NDUFB9Q9Y6M9 179 aa35.28■■■■□ 3.24
SOD1-203ENST00000470944 IARSP41252 1262 aaKnown RBP35.27■■■■□ 3.24
SOD1-203ENST00000470944 MCAMP43121 646 aa35.27■■■■□ 3.24
SOD1-203ENST00000470944 RASGRF1Q13972 1273 aa35.27■■■■□ 3.24
SOD1-203ENST00000470944 DBNDD1Q9H9R9 158 aa35.27■■■■□ 3.24
SOD1-203ENST00000470944 ZNF512BQ96KM6 892 aaPredicted RBP35.26■■■■□ 3.24
SOD1-203ENST00000470944 COA1Q9GZY4 146 aa35.26■■■■□ 3.23
SOD1-203ENST00000470944 LARGE2Q8N3Y3 721 aa35.25■■■■□ 3.23
SOD1-203ENST00000470944 TDRD7Q8NHU6 1098 aaKnown RBP35.25■■■■□ 3.23
SOD1-203ENST00000470944 SNRKQ9NRH2 765 aa35.25■■■■□ 3.23
SOD1-203ENST00000470944 COL1A1P02452 1464 aaPredicted RBP35.25■■■■□ 3.23
SOD1-203ENST00000470944 AOX1Q06278 1338 aa35.24■■■■□ 3.23
SOD1-203ENST00000470944 UQCRFS1P1P0C7P4 283 aa35.24■■■■□ 3.23
SOD1-203ENST00000470944 IL1R1P14778 569 aa35.24■■■■□ 3.23
SOD1-203ENST00000470944 GNL3LQ9NVN8 582 aaKnown RBP35.24■■■■□ 3.23
SOD1-203ENST00000470944 HMG20BQ9P0W2 317 aa35.24■■■■□ 3.23
SOD1-203ENST00000470944 ERC2O15083 957 aa35.23■■■■□ 3.23
SOD1-203ENST00000470944 GLRX3O76003 335 aaKnown RBP35.23■■■■□ 3.23
SOD1-203ENST00000470944 VPS33BQ9H267 617 aa35.23■■■■□ 3.23
SOD1-203ENST00000470944 ECE2O60344 883 aa35.22■■■■□ 3.23
SOD1-203ENST00000470944 GSPT1P15170 499 aaKnown RBP35.22■■■■□ 3.23
SOD1-203ENST00000470944 JAG2Q9Y219 1238 aa35.22■■■■□ 3.23
SOD1-203ENST00000470944 G3V3G9 751 aa35.21■■■■□ 3.23
SOD1-203ENST00000470944 MAP4K4O95819 1239 aaPredicted RBP35.21■■■■□ 3.23
SOD1-203ENST00000470944 TTC22Q5TAA0 569 aa35.21■■■■□ 3.23
SOD1-203ENST00000470944 DCAF8Q5TAQ9 597 aa35.21■■■■□ 3.23
SOD1-203ENST00000470944 PPIL4Q8WUA2 492 aaKnown RBP eCLIP35.21■■■■□ 3.23
SOD1-203ENST00000470944 KCNQ5Q9NR82 932 aa35.21■■■■□ 3.23
SOD1-203ENST00000470944 FRAT2O75474 233 aaPredicted RBP35.2■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms