RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 MPNDQ8N594 471 aa11.85□□□□□ -0.51
CCM2-204ENST00000470837 TTLL6Q8N841 843 aa11.85□□□□□ -0.51
CCM2-204ENST00000470837 HAUS7Q99871 368 aa11.85□□□□□ -0.51
CCM2-204ENST00000470837 FSD1Q9BTV5 496 aa11.85□□□□□ -0.51
CCM2-204ENST00000470837 DIAPH3Q9NSV4 1193 aa11.85□□□□□ -0.51
CCM2-204ENST00000470837 TNRC6CQ9HCJ0 1690 aaKnown RBP11.84□□□□□ -0.51
CCM2-204ENST00000470837 NRXN2Q9P2S2 1712 aa11.84□□□□□ -0.51
CCM2-204ENST00000470837 G3V3G9 751 aa11.84□□□□□ -0.51
CCM2-204ENST00000470837 GPSM2P81274 684 aa11.84□□□□□ -0.51
CCM2-204ENST00000470837 TTF1Q15361 905 aaPredicted RBP11.84□□□□□ -0.51
CCM2-204ENST00000470837 GRIPAP1Q4V328 841 aa11.84□□□□□ -0.51
CCM2-204ENST00000470837 DCAF8Q5TAQ9 597 aa11.84□□□□□ -0.51
CCM2-204ENST00000470837 ZNF804AQ7Z570 1209 aa11.84□□□□□ -0.51
CCM2-204ENST00000470837 RUFY2Q8WXA3 655 aa11.84□□□□□ -0.51
CCM2-204ENST00000470837 ZNF512BQ96KM6 892 aaPredicted RBP11.84□□□□□ -0.51
CCM2-204ENST00000470837 EYA3Q99504 573 aa11.84□□□□□ -0.51
CCM2-204ENST00000470837 BACH2Q9BYV9 841 aa11.84□□□□□ -0.51
CCM2-204ENST00000470837 PAG1Q9NWQ8 432 aa11.84□□□□□ -0.51
CCM2-204ENST00000470837 CD2APQ9Y5K6 639 aa11.84□□□□□ -0.51
CCM2-204ENST00000470837 A0A0G2JLW4 131 aa11.83□□□□□ -0.52
CCM2-204ENST00000470837 GOLIM4O00461 696 aa11.83□□□□□ -0.52
CCM2-204ENST00000470837 HIBADHP31937 336 aaKnown RBP11.83□□□□□ -0.52
CCM2-204ENST00000470837 BCAMP50895 628 aa11.83□□□□□ -0.52
CCM2-204ENST00000470837 SOGA3Q5TF21 947 aa11.83□□□□□ -0.52
CCM2-204ENST00000470837 PODXL2Q9NZ53 605 aa11.83□□□□□ -0.52
CCM2-204ENST00000470837 PIM2Q9P1W9 311 aa11.83□□□□□ -0.52
CCM2-204ENST00000470837 SNAP23O00161 211 aa11.82□□□□□ -0.52
CCM2-204ENST00000470837 SEMA3EO15041 775 aa11.82□□□□□ -0.52
CCM2-204ENST00000470837 DPEP1P16444 411 aa11.82□□□□□ -0.52
CCM2-204ENST00000470837 ARID4AP29374 1257 aaPredicted RBP11.82□□□□□ -0.52
CCM2-204ENST00000470837 PHKA1P46020 1223 aa11.82□□□□□ -0.52
CCM2-204ENST00000470837 GYG1P46976 350 aa11.82□□□□□ -0.52
CCM2-204ENST00000470837 WASHC4Q2M389 1173 aa11.82□□□□□ -0.52
CCM2-204ENST00000470837 C8orf34Q49A92 452 aa11.82□□□□□ -0.52
CCM2-204ENST00000470837 ZSCAN25Q6NSZ9 544 aa11.82□□□□□ -0.52
CCM2-204ENST00000470837 TBC1D9Q6ZT07 1266 aa11.82□□□□□ -0.52
CCM2-204ENST00000470837 TICAM2Q86XR7 235 aa11.82□□□□□ -0.52
CCM2-204ENST00000470837 SPATA5Q8NB90 893 aa11.82□□□□□ -0.52
CCM2-204ENST00000470837 SUPT20HQ8NEM7 779 aa11.82□□□□□ -0.52
CCM2-204ENST00000470837 ZC3H12CQ9C0D7 883 aaKnown RBP11.82□□□□□ -0.52
CCM2-204ENST00000470837 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCM2-204ENST00000470837 ZNF219Q9P2Y4 722 aaPredicted RBP11.82□□□□□ -0.52
CCM2-204ENST00000470837 DENND2AQ9ULE3 1009 aa11.82□□□□□ -0.52
CCM2-204ENST00000470837 REC8O95072 547 aa11.81□□□□□ -0.52
CCM2-204ENST00000470837 CCDC93Q567U6 631 aa11.81□□□□□ -0.52
CCM2-204ENST00000470837 DALRD3Q5D0E6 543 aaKnown RBP11.81□□□□□ -0.52
CCM2-204ENST00000470837 RTKN2Q8IZC4 609 aa11.81□□□□□ -0.52
CCM2-204ENST00000470837 TBC1D16Q8TBP0 767 aa11.81□□□□□ -0.52
CCM2-204ENST00000470837 SNRKQ9NRH2 765 aa11.81□□□□□ -0.52
CCM2-204ENST00000470837 ZFYP08048 801 aaPredicted RBP11.8□□□□□ -0.52
CCM2-204ENST00000470837 PTGER2P43116 358 aa11.8□□□□□ -0.52
CCM2-204ENST00000470837 MCAMP43121 646 aa11.8□□□□□ -0.52
CCM2-204ENST00000470837 ZAP70P43403 619 aa11.8□□□□□ -0.52
CCM2-204ENST00000470837 MFAP1P55081 439 aaKnown RBP11.8□□□□□ -0.52
CCM2-204ENST00000470837 KIAA1211Q6ZU35 1233 aa11.8□□□□□ -0.52
CCM2-204ENST00000470837 C15orf52Q6ZUT6 534 aaKnown RBP11.8□□□□□ -0.52
CCM2-204ENST00000470837 FBXO33Q7Z6M2 555 aa11.8□□□□□ -0.52
CCM2-204ENST00000470837 KBTBD3Q8NAB2 608 aa11.8□□□□□ -0.52
CCM2-204ENST00000470837 FAM84BQ96KN1 310 aaPredicted RBP11.8□□□□□ -0.52
CCM2-204ENST00000470837 C21orf2O43822 256 aa11.79□□□□□ -0.52
CCM2-204ENST00000470837 CHMLP26374 656 aa11.79□□□□□ -0.52
CCM2-204ENST00000470837 MAP3K12Q12852 859 aa11.79□□□□□ -0.52
CCM2-204ENST00000470837 RASGRF1Q13972 1273 aa11.79□□□□□ -0.52
CCM2-204ENST00000470837 ZGPATQ8N5A5 531 aaKnown RBP11.79□□□□□ -0.52
CCM2-204ENST00000470837 SGIP1Q9BQI5 828 aa11.79□□□□□ -0.52
CCM2-204ENST00000470837 HMG20BQ9P0W2 317 aa11.79□□□□□ -0.52
CCM2-204ENST00000470837 LRP2BPQ9P2M1 347 aa11.79□□□□□ -0.52
CCM2-204ENST00000470837 CASZ1Q86V15 1759 aa11.79□□□□□ -0.52
CCM2-204ENST00000470837 RFX7Q2KHR2 1363 aa11.79□□□□□ -0.52
CCM2-204ENST00000470837 MED23Q9ULK4 1368 aa11.79□□□□□ -0.52
CCM2-204ENST00000470837 RIMBP2O15034 1052 aa11.78□□□□□ -0.52
CCM2-204ENST00000470837 IDH1O75874 414 aaKnown RBP11.78□□□□□ -0.52
CCM2-204ENST00000470837 CHAF1AQ13111 956 aaPredicted RBP11.78□□□□□ -0.52
CCM2-204ENST00000470837 SPTY2D1Q68D10 685 aaPredicted RBP11.78□□□□□ -0.52
CCM2-204ENST00000470837 CWC27Q6UX04 472 aaKnown RBP11.78□□□□□ -0.52
CCM2-204ENST00000470837 EDC3Q96F86 508 aaKnown RBP11.78□□□□□ -0.52
CCM2-204ENST00000470837 COA1Q9GZY4 146 aa11.78□□□□□ -0.52
CCM2-204ENST00000470837 POLLQ9UGP5 575 aa11.78□□□□□ -0.52
CCM2-204ENST00000470837 IQSEC3Q9UPP2 1182 aaPredicted RBP11.78□□□□□ -0.52
CCM2-204ENST00000470837 NDUFB9Q9Y6M9 179 aa11.78□□□□□ -0.52
CCM2-204ENST00000470837 MCCP23508 829 aa11.77□□□□□ -0.53
CCM2-204ENST00000470837 KLRK1P26718 216 aa11.77□□□□□ -0.53
CCM2-204ENST00000470837 SCARF1Q14162 830 aa11.77□□□□□ -0.53
CCM2-204ENST00000470837 PI16Q6UXB8 463 aa11.77□□□□□ -0.53
CCM2-204ENST00000470837 WDR66Q8TBY9 1149 aa11.77□□□□□ -0.53
CCM2-204ENST00000470837 ESYT1Q9BSJ8 1104 aa11.77□□□□□ -0.53
CCM2-204ENST00000470837 RAI14Q9P0K7 980 aa11.77□□□□□ -0.53
CCM2-204ENST00000470837 ABCF2Q9UG63 623 aa11.77□□□□□ -0.53
CCM2-204ENST00000470837 PDS5AQ29RF7 1337 aaKnown RBP11.77□□□□□ -0.53
CCM2-204ENST00000470837 RAD50Q92878 1312 aa11.77□□□□□ -0.53
CCM2-204ENST00000470837 ANKRD31Q8N7Z5 1873 aa11.76□□□□□ -0.53
CCM2-204ENST00000470837 COL4A1P02462 1669 aa11.76□□□□□ -0.53
CCM2-204ENST00000470837 WTIPA6NIX2 430 aaPredicted RBP11.76□□□□□ -0.53
CCM2-204ENST00000470837 RNF113AO15541 343 aaKnown RBP11.76□□□□□ -0.53
CCM2-204ENST00000470837 CYP2E1P05181 493 aaPredicted RBP11.76□□□□□ -0.53
CCM2-204ENST00000470837 KCNA3P22001 575 aa11.76□□□□□ -0.53
CCM2-204ENST00000470837 SLC9C2Q5TAH2 1124 aa11.76□□□□□ -0.53
CCM2-204ENST00000470837 OLFM4Q6UX06 510 aa11.76□□□□□ -0.53
CCM2-204ENST00000470837 TBC1D22AQ8WUA7 517 aa11.76□□□□□ -0.53
CCM2-204ENST00000470837 C7orf43Q8WVR3 580 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms