RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 SSRP1Q08945 709 aaKnown RBP16.22■□□□□ 0.19
HDAC7-219ENST00000470668 NAA25Q14CX7 972 aa16.22■□□□□ 0.19
HDAC7-219ENST00000470668 NAPBQ9H115 298 aa16.22■□□□□ 0.19
HDAC7-219ENST00000470668 ZNF518AQ6AHZ1 1483 aa16.22■□□□□ 0.19
HDAC7-219ENST00000470668 PPIP5K1Q6PFW1 1433 aa16.22■□□□□ 0.19
HDAC7-219ENST00000470668 CKAP4Q07065 602 aaKnown RBP16.22■□□□□ 0.19
HDAC7-219ENST00000470668 LONRF3Q496Y0 759 aa16.22■□□□□ 0.19
HDAC7-219ENST00000470668 E2F4Q16254 413 aa16.21■□□□□ 0.19
HDAC7-219ENST00000470668 RRAGBQ5VZM2 374 aa16.21■□□□□ 0.19
HDAC7-219ENST00000470668 NPC1L1Q9UHC9 1359 aa16.21■□□□□ 0.19
HDAC7-219ENST00000470668 TMCO5BA8MYB1 307 aa16.21■□□□□ 0.19
HDAC7-219ENST00000470668 RXRAP19793 462 aa16.21■□□□□ 0.19
HDAC7-219ENST00000470668 ARID5BQ14865 1188 aa16.21■□□□□ 0.19
HDAC7-219ENST00000470668 DESI2Q9BSY9 194 aa16.21■□□□□ 0.19
HDAC7-219ENST00000470668 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.21■□□□□ 0.19
HDAC7-219ENST00000470668 MTX1Q13505 466 aa16.21■□□□□ 0.18
HDAC7-219ENST00000470668 MTHFSDQ2M296 383 aaKnown RBP16.21■□□□□ 0.18
HDAC7-219ENST00000470668 DHX58Q96C10 678 aa16.21■□□□□ 0.18
HDAC7-219ENST00000470668 ALS2CR12Q96Q35 445 aa16.21■□□□□ 0.18
HDAC7-219ENST00000470668 MPHOSPH8Q99549 860 aa16.21■□□□□ 0.18
HDAC7-219ENST00000470668 PHAXQ9H814 394 aaKnown RBP16.21■□□□□ 0.18
HDAC7-219ENST00000470668 DDX41Q9UJV9 622 aaKnown RBP16.21■□□□□ 0.18
HDAC7-219ENST00000470668 ANKRD62A6NC57 917 aa16.2■□□□□ 0.18
HDAC7-219ENST00000470668 INCENPQ9NQS7 918 aa16.2■□□□□ 0.18
HDAC7-219ENST00000470668 OPA1O60313 960 aa16.2■□□□□ 0.18
HDAC7-219ENST00000470668 MAP2K2P36507 400 aa16.2■□□□□ 0.18
HDAC7-219ENST00000470668 TMEM67Q5HYA8 995 aa16.2■□□□□ 0.18
HDAC7-219ENST00000470668 MEX3CQ5U5Q3 659 aaKnown RBP16.2■□□□□ 0.18
HDAC7-219ENST00000470668 RASEFQ8IZ41 740 aa16.2■□□□□ 0.18
HDAC7-219ENST00000470668 NAA15Q9BXJ9 866 aaKnown RBP16.2■□□□□ 0.18
HDAC7-219ENST00000470668 ABCF2Q9UG63 623 aa16.2■□□□□ 0.18
HDAC7-219ENST00000470668 SLC27A2O14975 620 aa16.2■□□□□ 0.18
HDAC7-219ENST00000470668 LIG3P49916 1009 aa16.2■□□□□ 0.18
HDAC7-219ENST00000470668 SEPT7Q16181 437 aaKnown RBP16.2■□□□□ 0.18
HDAC7-219ENST00000470668 MCMDC2Q4G0Z9 681 aa16.2■□□□□ 0.18
HDAC7-219ENST00000470668 CCDC121Q6ZUS5 278 aa16.2■□□□□ 0.18
HDAC7-219ENST00000470668 ABCC2Q92887 1545 aa16.2■□□□□ 0.18
HDAC7-219ENST00000470668 ARHGAP6O43182 974 aa16.19■□□□□ 0.18
HDAC7-219ENST00000470668 CCDC129Q6ZRS4 1044 aa16.19■□□□□ 0.18
HDAC7-219ENST00000470668 TRIM47Q96LD4 638 aa16.19■□□□□ 0.18
HDAC7-219ENST00000470668 RPS6KB1P23443 525 aa16.19■□□□□ 0.18
HDAC7-219ENST00000470668 CHRNA2Q15822 529 aa16.19■□□□□ 0.18
HDAC7-219ENST00000470668 PTPN21Q16825 1174 aa16.19■□□□□ 0.18
HDAC7-219ENST00000470668 NCOA7Q8NI08 942 aa16.19■□□□□ 0.18
HDAC7-219ENST00000470668 IFT81Q8WYA0 676 aa16.19■□□□□ 0.18
HDAC7-219ENST00000470668 CCT6AP40227 531 aaKnown RBP16.19■□□□□ 0.18
HDAC7-219ENST00000470668 ADKP55263 362 aaKnown RBP16.19■□□□□ 0.18
HDAC7-219ENST00000470668 LRRC59Q96AG4 307 aaKnown RBP16.19■□□□□ 0.18
HDAC7-219ENST00000470668 IMPACTQ9P2X3 320 aa16.19■□□□□ 0.18
HDAC7-219ENST00000470668 AKR1B15C9JRZ8 316 aaPredicted RBP16.19■□□□□ 0.18
HDAC7-219ENST00000470668 NOP2P46087 812 aaKnown RBP16.19■□□□□ 0.18
HDAC7-219ENST00000470668 GYS2P54840 703 aa16.19■□□□□ 0.18
HDAC7-219ENST00000470668 CWF19L2Q2TBE0 894 aaKnown RBP16.19■□□□□ 0.18
HDAC7-219ENST00000470668 RRP15Q9Y3B9 282 aaKnown RBP16.19■□□□□ 0.18
HDAC7-219ENST00000470668 CLCN6P51797 869 aa16.18■□□□□ 0.18
HDAC7-219ENST00000470668 PRPF4BQ13523 1007 aaKnown RBP16.18■□□□□ 0.18
HDAC7-219ENST00000470668 METTL24Q5JXM2 366 aa16.18■□□□□ 0.18
HDAC7-219ENST00000470668 DHX32Q7L7V1 743 aaKnown RBP16.18■□□□□ 0.18
HDAC7-219ENST00000470668 SIRT2Q8IXJ6 389 aa16.18■□□□□ 0.18
HDAC7-219ENST00000470668 TTC41PQ6P2S7 1318 aa16.18■□□□□ 0.18
HDAC7-219ENST00000470668 UNC5CLQ8IV45 518 aa16.18■□□□□ 0.18
HDAC7-219ENST00000470668 GPR161Q8N6U8 529 aaKnown RBP16.18■□□□□ 0.18
HDAC7-219ENST00000470668 GOLGA6CA6NDK9 693 aa16.18■□□□□ 0.18
HDAC7-219ENST00000470668 GOLGA6DP0CG33 693 aa16.18■□□□□ 0.18
HDAC7-219ENST00000470668 SF3A3Q12874 501 aaKnown RBP eCLIP16.18■□□□□ 0.18
HDAC7-219ENST00000470668 IGSF22Q8N9C0 903 aa16.18■□□□□ 0.18
HDAC7-219ENST00000470668 EHBP1Q8NDI1 1231 aa16.18■□□□□ 0.18
HDAC7-219ENST00000470668 PDE11AQ9HCR9 933 aa16.18■□□□□ 0.18
HDAC7-219ENST00000470668 GOLGA6AQ9NYA3 693 aa16.18■□□□□ 0.18
HDAC7-219ENST00000470668 LRP2BPQ9P2M1 347 aa16.18■□□□□ 0.18
HDAC7-219ENST00000470668 CCDC196A0A1B0GTZ2 297 aa16.17■□□□□ 0.18
HDAC7-219ENST00000470668 PTPRTO14522 1441 aa16.17■□□□□ 0.18
HDAC7-219ENST00000470668 CYLC1P35663 651 aaPredicted RBP16.17■□□□□ 0.18
HDAC7-219ENST00000470668 SLC39A6Q13433 755 aa16.17■□□□□ 0.18
HDAC7-219ENST00000470668 SYCP1Q15431 976 aa16.17■□□□□ 0.18
HDAC7-219ENST00000470668 KANK3Q6NY19 840 aa16.17■□□□□ 0.18
HDAC7-219ENST00000470668 MYCBPQ99417 103 aaPredicted RBP16.17■□□□□ 0.18
HDAC7-219ENST00000470668 ZNF202O95125 648 aa16.17■□□□□ 0.18
HDAC7-219ENST00000470668 MRFAP1L1Q96HT8 127 aa16.17■□□□□ 0.18
HDAC7-219ENST00000470668 UGGT1Q9NYU2 1555 aa16.17■□□□□ 0.18
HDAC7-219ENST00000470668 G3V3G9 751 aa16.17■□□□□ 0.18
HDAC7-219ENST00000470668 IDEP14735 1019 aa16.17■□□□□ 0.18
HDAC7-219ENST00000470668 CCDC122Q5T0U0 273 aa16.17■□□□□ 0.18
HDAC7-219ENST00000470668 DCAF8Q5TAQ9 597 aa16.17■□□□□ 0.18
HDAC7-219ENST00000470668 HINFPQ9BQA5 517 aa16.17■□□□□ 0.18
HDAC7-219ENST00000470668 ZDHHC9Q9Y397 364 aa16.17■□□□□ 0.18
HDAC7-219ENST00000470668 CUL4AQ13619 759 aa16.16■□□□□ 0.18
HDAC7-219ENST00000470668 NFE2L3Q9Y4A8 694 aa16.16■□□□□ 0.18
HDAC7-219ENST00000470668 NDUFB9Q9Y6M9 179 aa16.16■□□□□ 0.18
HDAC7-219ENST00000470668 KRT86O43790 486 aa16.16■□□□□ 0.18
HDAC7-219ENST00000470668 HPDP32754 393 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-219ENST00000470668 PTH1RQ03431 593 aa16.16■□□□□ 0.18
HDAC7-219ENST00000470668 KIF5AQ12840 1032 aa16.16■□□□□ 0.18
HDAC7-219ENST00000470668 NUTM2AQ8IVF1 878 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-219ENST00000470668 CTAGE1Q96RT6 745 aa16.16■□□□□ 0.18
HDAC7-219ENST00000470668 ZCCHC17Q9NP64 241 aaKnown RBP16.16■□□□□ 0.18
HDAC7-219ENST00000470668 TPCN1Q9ULQ1 816 aa16.16■□□□□ 0.18
HDAC7-219ENST00000470668 PRC1O43663 620 aa16.16■□□□□ 0.18
HDAC7-219ENST00000470668 TRMT44Q8IYL2 757 aaKnown RBP16.16■□□□□ 0.18
HDAC7-219ENST00000470668 BANK1Q8NDB2 785 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms