RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 ARHGEF25Q86VW2 580 aa15.4■□□□□ 0.06
SFXN3-205ENST00000470252 ERCC4Q92889 916 aaPredicted RBP15.4■□□□□ 0.06
SFXN3-205ENST00000470252 CCZ1BP86790 482 aa15.4■□□□□ 0.06
SFXN3-205ENST00000470252 CCZ1P86791 482 aaPredicted RBP15.4■□□□□ 0.06
SFXN3-205ENST00000470252 UBE3BQ7Z3V4 1068 aa15.4■□□□□ 0.06
SFXN3-205ENST00000470252 CEP57L1Q8IYX8 460 aa15.4■□□□□ 0.06
SFXN3-205ENST00000470252 AOPEPQ8N6M6 819 aa15.4■□□□□ 0.06
SFXN3-205ENST00000470252 ENGASEQ8NFI3 743 aa15.4■□□□□ 0.06
SFXN3-205ENST00000470252 NCOA5Q9HCD5 579 aaKnown RBP15.4■□□□□ 0.06
SFXN3-205ENST00000470252 DDX41Q9UJV9 622 aaKnown RBP15.4■□□□□ 0.06
SFXN3-205ENST00000470252 RGPD5Q99666 1765 aa15.39■□□□□ 0.05
SFXN3-205ENST00000470252 SLFNL1Q499Z3 407 aa15.39■□□□□ 0.05
SFXN3-205ENST00000470252 LMOD2Q6P5Q4 547 aa15.39■□□□□ 0.05
SFXN3-205ENST00000470252 ANKRD13DQ6ZTN6 518 aa15.39■□□□□ 0.05
SFXN3-205ENST00000470252 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.39■□□□□ 0.05
SFXN3-205ENST00000470252 ZNF215Q9UL58 517 aaPredicted RBP15.39■□□□□ 0.05
SFXN3-205ENST00000470252 V9GYY5 206 aaPredicted RBP15.39■□□□□ 0.05
SFXN3-205ENST00000470252 SH3TC1Q8TE82 1336 aa15.38■□□□□ 0.05
SFXN3-205ENST00000470252 ADAMTS7Q9UKP4 1686 aa15.38■□□□□ 0.05
SFXN3-205ENST00000470252 PIP4K2AP48426 406 aaPredicted RBP15.38■□□□□ 0.05
SFXN3-205ENST00000470252 ATL3Q6DD88 541 aa15.38■□□□□ 0.05
SFXN3-205ENST00000470252 KBTBD3Q8NAB2 608 aa15.38■□□□□ 0.05
SFXN3-205ENST00000470252 KIF18AQ8NI77 898 aa15.38■□□□□ 0.05
SFXN3-205ENST00000470252 SCN11AQ9UI33 1791 aa15.38■□□□□ 0.05
SFXN3-205ENST00000470252 CCAR2Q8N163 923 aaKnown RBP15.38■□□□□ 0.05
SFXN3-205ENST00000470252 NAT10Q9H0A0 1025 aaKnown RBP15.38■□□□□ 0.05
SFXN3-205ENST00000470252 CAMTA1Q9Y6Y1 1673 aa15.37■□□□□ 0.05
SFXN3-205ENST00000470252 A0A0G2JLW4 131 aa15.37■□□□□ 0.05
SFXN3-205ENST00000470252 GOLIM4O00461 696 aa15.37■□□□□ 0.05
SFXN3-205ENST00000470252 EXOSC10Q01780 885 aaKnown RBP15.37■□□□□ 0.05
SFXN3-205ENST00000470252 ZNF771Q7L3S4 317 aaPredicted RBP15.37■□□□□ 0.05
SFXN3-205ENST00000470252 ILDR1Q86SU0 546 aaPredicted RBP15.37■□□□□ 0.05
SFXN3-205ENST00000470252 ZNF397Q8NF99 534 aaPredicted RBP15.37■□□□□ 0.05
SFXN3-205ENST00000470252 SDF4Q9BRK5 362 aa15.37■□□□□ 0.05
SFXN3-205ENST00000470252 AXIN2Q9Y2T1 843 aa15.37■□□□□ 0.05
SFXN3-205ENST00000470252 ARFGEF2Q9Y6D5 1785 aa15.36■□□□□ 0.05
SFXN3-205ENST00000470252 ATP5J2-PTCD1G3V325 749 aa15.36■□□□□ 0.05
SFXN3-205ENST00000470252 PTCD1O75127 700 aaKnown RBP15.36■□□□□ 0.05
SFXN3-205ENST00000470252 RABL6Q3YEC7 729 aaPredicted RBP15.36■□□□□ 0.05
SFXN3-205ENST00000470252 CHST3Q7LGC8 479 aa15.36■□□□□ 0.05
SFXN3-205ENST00000470252 MRPS27Q92552 414 aaKnown RBP15.36■□□□□ 0.05
SFXN3-205ENST00000470252 SLC52A2Q9HAB3 445 aa15.36■□□□□ 0.05
SFXN3-205ENST00000470252 PCDHA7Q9UN72 937 aa15.36■□□□□ 0.05
SFXN3-205ENST00000470252 MORC2Q9Y6X9 1032 aaPredicted RBP15.36■□□□□ 0.05
SFXN3-205ENST00000470252 SALL1Q9NSC2 1324 aa15.36■□□□□ 0.05
SFXN3-205ENST00000470252 A0A087WZG4 1122 aa15.36■□□□□ 0.05
SFXN3-205ENST00000470252 E7EWF7 191 aa15.36■□□□□ 0.05
SFXN3-205ENST00000470252 GSDMDP57764 484 aa15.36■□□□□ 0.05
SFXN3-205ENST00000470252 KMT5BQ4FZB7 885 aa15.36■□□□□ 0.05
SFXN3-205ENST00000470252 NFATC2IPQ8NCF5 419 aa15.36■□□□□ 0.05
SFXN3-205ENST00000470252 NEUROD6Q96NK8 337 aa15.36■□□□□ 0.05
SFXN3-205ENST00000470252 DSCC1Q9BVC3 393 aa15.36■□□□□ 0.05
SFXN3-205ENST00000470252 HELLSQ9NRZ9 838 aa15.36■□□□□ 0.05
SFXN3-205ENST00000470252 PALLDQ8WX93 1383 aa15.35■□□□□ 0.05
SFXN3-205ENST00000470252 A0A1B0GVL5 298 aa15.35■□□□□ 0.05
SFXN3-205ENST00000470252 PDIA3P30101 505 aaKnown RBP15.35■□□□□ 0.05
SFXN3-205ENST00000470252 GABPB1Q06547 395 aaPredicted RBP15.35■□□□□ 0.05
SFXN3-205ENST00000470252 FMR1NBQ8N0W7 255 aaPredicted RBP15.35■□□□□ 0.05
SFXN3-205ENST00000470252 ERO1AQ96HE7 468 aa15.35■□□□□ 0.05
SFXN3-205ENST00000470252 ZNF496Q96IT1 587 aaPredicted RBP15.35■□□□□ 0.05
SFXN3-205ENST00000470252 AGXT2Q9BYV1 514 aa15.35■□□□□ 0.05
SFXN3-205ENST00000470252 PAG1Q9NWQ8 432 aa15.35■□□□□ 0.05
SFXN3-205ENST00000470252 CARMIL3Q8ND23 1372 aa15.35■□□□□ 0.05
SFXN3-205ENST00000470252 ZRSR1Q15695 479 aaKnown RBP15.35■□□□□ 0.05
SFXN3-205ENST00000470252 NBPF11Q86T75 865 aa15.35■□□□□ 0.05
SFXN3-205ENST00000470252 SLIT3O75094 1523 aa15.34■□□□□ 0.05
SFXN3-205ENST00000470252 ELF2Q15723 593 aa15.34■□□□□ 0.05
SFXN3-205ENST00000470252 HSPD1P10809 573 aaKnown RBP15.34■□□□□ 0.05
SFXN3-205ENST00000470252 ADALQ6DHV7 355 aa15.34■□□□□ 0.05
SFXN3-205ENST00000470252 LMBR1LQ6UX01 489 aa15.34■□□□□ 0.05
SFXN3-205ENST00000470252 ZNF274Q96GC6 653 aaPredicted RBP15.34■□□□□ 0.05
SFXN3-205ENST00000470252 KDM6AO15550 1401 aaPredicted RBP15.33■□□□□ 0.05
SFXN3-205ENST00000470252 ABCC6O95255 1503 aa15.33■□□□□ 0.05
SFXN3-205ENST00000470252 SMC2O95347 1197 aa15.33■□□□□ 0.04
SFXN3-205ENST00000470252 SLU7O95391 586 aaKnown RBP15.33■□□□□ 0.04
SFXN3-205ENST00000470252 NDUFA8P51970 172 aa15.33■□□□□ 0.04
SFXN3-205ENST00000470252 SF3A1Q15459 793 aaKnown RBP15.33■□□□□ 0.04
SFXN3-205ENST00000470252 DPCR1Q3MIW9 517 aa15.33■□□□□ 0.04
SFXN3-205ENST00000470252 OSBPL5Q9H0X9 879 aaPredicted RBP15.33■□□□□ 0.04
SFXN3-205ENST00000470252 KCND1Q9NSA2 647 aa15.33■□□□□ 0.04
SFXN3-205ENST00000470252 RTEL1Q9NZ71 1219 aa15.33■□□□□ 0.04
SFXN3-205ENST00000470252 IMPACTQ9P2X3 320 aa15.33■□□□□ 0.04
SFXN3-205ENST00000470252 KIF2AO00139 706 aaPredicted RBP15.33■□□□□ 0.04
SFXN3-205ENST00000470252 STK38Q15208 465 aa15.33■□□□□ 0.04
SFXN3-205ENST00000470252 ZMYM1Q5SVZ6 1142 aa15.33■□□□□ 0.04
SFXN3-205ENST00000470252 FBXO38Q6PIJ6 1188 aa15.33■□□□□ 0.04
SFXN3-205ENST00000470252 LRP10Q7Z4F1 713 aa15.33■□□□□ 0.04
SFXN3-205ENST00000470252 KRT222Q8N1A0 295 aa15.33■□□□□ 0.04
SFXN3-205ENST00000470252 RAPGEF4Q8WZA2 1011 aa15.33■□□□□ 0.04
SFXN3-205ENST00000470252 FDPSP14324 419 aaKnown RBP15.32■□□□□ 0.04
SFXN3-205ENST00000470252 OTUD7BQ6GQQ9 843 aa15.32■□□□□ 0.04
SFXN3-205ENST00000470252 TMC6Q7Z403 805 aa15.32■□□□□ 0.04
SFXN3-205ENST00000470252 XPO4Q9C0E2 1151 aaKnown RBP15.32■□□□□ 0.04
SFXN3-205ENST00000470252 IFNKQ9P0W0 207 aa15.32■□□□□ 0.04
SFXN3-205ENST00000470252 KIAA1468Q9P260 1216 aa15.32■□□□□ 0.04
SFXN3-205ENST00000470252 CLIC4Q9Y696 253 aa15.32■□□□□ 0.04
SFXN3-205ENST00000470252 A0A1W2PQ27 194 aa15.32■□□□□ 0.04
SFXN3-205ENST00000470252 A0A1W2PQ64 194 aa15.32■□□□□ 0.04
SFXN3-205ENST00000470252 A0A1W2PQD8 194 aa15.32■□□□□ 0.04
SFXN3-205ENST00000470252 SNRPA1P09661 255 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms