RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 GMLQ99445 158 aa11.6□□□□□ -0.55
SYNGAP1-205ENST00000470232 PTPN22Q9Y2R2 807 aa11.6□□□□□ -0.55
SYNGAP1-205ENST00000470232 DLG5Q8TDM6 1919 aa11.59□□□□□ -0.55
SYNGAP1-205ENST00000470232 IRS4O14654 1257 aaPredicted RBP11.59□□□□□ -0.55
SYNGAP1-205ENST00000470232 SPRYD7Q5W111 196 aa11.59□□□□□ -0.55
SYNGAP1-205ENST00000470232 R3HDMLQ9H3Y0 253 aa11.59□□□□□ -0.55
SYNGAP1-205ENST00000470232 EFCC1Q9HA90 598 aa11.59□□□□□ -0.55
SYNGAP1-205ENST00000470232 COLQQ9Y215 455 aaPredicted RBP11.59□□□□□ -0.55
SYNGAP1-205ENST00000470232 CENPFP49454 3210 aa11.59□□□□□ -0.55
SYNGAP1-205ENST00000470232 EN2P19622 333 aaPredicted RBP11.58□□□□□ -0.56
SYNGAP1-205ENST00000470232 ATP2B4P23634 1241 aa11.58□□□□□ -0.56
SYNGAP1-205ENST00000470232 NBPF9Q3BBW0 867 aa11.58□□□□□ -0.56
SYNGAP1-205ENST00000470232 IFNL1Q8IU54 200 aa11.58□□□□□ -0.56
SYNGAP1-205ENST00000470232 APOBEC3FQ8IUX4 373 aaKnown RBP11.58□□□□□ -0.56
SYNGAP1-205ENST00000470232 ARMC5Q96C12 935 aa11.58□□□□□ -0.56
SYNGAP1-205ENST00000470232 PLEKHF1Q96S99 279 aa11.58□□□□□ -0.56
SYNGAP1-205ENST00000470232 ISCA1Q9BUE6 129 aa11.58□□□□□ -0.56
SYNGAP1-205ENST00000470232 XDHP47989 1333 aa11.58□□□□□ -0.56
SYNGAP1-205ENST00000470232 MYO3BQ8WXR4 1341 aa11.58□□□□□ -0.56
SYNGAP1-205ENST00000470232 UNCXA6NJT0 531 aa11.57□□□□□ -0.56
SYNGAP1-205ENST00000470232 WNT10BO00744 389 aa11.57□□□□□ -0.56
SYNGAP1-205ENST00000470232 PPP1R12BO60237 982 aaPredicted RBP11.57□□□□□ -0.56
SYNGAP1-205ENST00000470232 ZBTB48P10074 688 aaPredicted RBP11.57□□□□□ -0.56
SYNGAP1-205ENST00000470232 TRIM28Q13263 835 aaKnown RBP11.57□□□□□ -0.56
SYNGAP1-205ENST00000470232 PRKG1Q13976 671 aa11.57□□□□□ -0.56
SYNGAP1-205ENST00000470232 CCDC152Q4G0S7 254 aa11.57□□□□□ -0.56
SYNGAP1-205ENST00000470232 RTL5Q5HYW3 569 aaPredicted RBP11.57□□□□□ -0.56
SYNGAP1-205ENST00000470232 LDLRAD1Q5T700 205 aa11.57□□□□□ -0.56
SYNGAP1-205ENST00000470232 ANGEL1Q9UNK9 670 aaKnown RBP11.57□□□□□ -0.56
SYNGAP1-205ENST00000470232 SCAF8Q9UPN6 1271 aaKnown RBP11.57□□□□□ -0.56
SYNGAP1-205ENST00000470232 KIAA0100Q14667 2235 aaKnown RBP11.57□□□□□ -0.56
SYNGAP1-205ENST00000470232 SCN9AQ15858 1988 aa11.57□□□□□ -0.56
SYNGAP1-205ENST00000470232 ATP5J2-PTCD1G3V325 749 aa11.56□□□□□ -0.56
SYNGAP1-205ENST00000470232 DLL1O00548 723 aa11.56□□□□□ -0.56
SYNGAP1-205ENST00000470232 SP3Q02447 781 aa11.56□□□□□ -0.56
SYNGAP1-205ENST00000470232 LMOD3Q0VAK6 560 aa11.56□□□□□ -0.56
SYNGAP1-205ENST00000470232 SLC4A8Q2Y0W8 1093 aa11.56□□□□□ -0.56
SYNGAP1-205ENST00000470232 ZNF428Q96B54 188 aa11.56□□□□□ -0.56
SYNGAP1-205ENST00000470232 RIPK4P57078 832 aa11.55□□□□□ -0.56
SYNGAP1-205ENST00000470232 STRIP1Q5VSL9 837 aa11.55□□□□□ -0.56
SYNGAP1-205ENST00000470232 ANKRD18AQ8IVF6 992 aa11.55□□□□□ -0.56
SYNGAP1-205ENST00000470232 ZBTB38Q8NAP3 1195 aaPredicted RBP11.55□□□□□ -0.56
SYNGAP1-205ENST00000470232 SLC17A8Q8NDX2 589 aa11.55□□□□□ -0.56
SYNGAP1-205ENST00000470232 CD99L2Q8TCZ2 262 aa11.55□□□□□ -0.56
SYNGAP1-205ENST00000470232 FBXW7Q969H0 707 aa11.55□□□□□ -0.56
SYNGAP1-205ENST00000470232 DBF4Q9UBU7 674 aaPredicted RBP11.55□□□□□ -0.56
SYNGAP1-205ENST00000470232 HTTP42858 3142 aa11.55□□□□□ -0.56
SYNGAP1-205ENST00000470232 RBBP6Q7Z6E9 1792 aaKnown RBP11.54□□□□□ -0.56
SYNGAP1-205ENST00000470232 SEC31BQ9NQW1 1179 aa11.54□□□□□ -0.56
SYNGAP1-205ENST00000470232 HYPKQ9NX55 129 aa11.54□□□□□ -0.56
SYNGAP1-205ENST00000470232 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.54□□□□□ -0.56
SYNGAP1-205ENST00000470232 CHPF2Q9P2E5 772 aa11.54□□□□□ -0.56
SYNGAP1-205ENST00000470232 PSME4Q14997 1843 aa11.53□□□□□ -0.56
SYNGAP1-205ENST00000470232 PDE8AO60658 829 aa11.53□□□□□ -0.56
SYNGAP1-205ENST00000470232 MAP3K11Q16584 847 aa11.53□□□□□ -0.56
SYNGAP1-205ENST00000470232 SUPT20HL1Q3ZLR7 823 aa11.53□□□□□ -0.56
SYNGAP1-205ENST00000470232 SLC9C1Q4G0N8 1177 aa11.53□□□□□ -0.56
SYNGAP1-205ENST00000470232 DACT2Q5SW24 774 aa11.53□□□□□ -0.56
SYNGAP1-205ENST00000470232 HDGFL1Q5TGJ6 251 aa11.53□□□□□ -0.56
SYNGAP1-205ENST00000470232 RIC3Q7Z5B4 369 aa11.53□□□□□ -0.56
SYNGAP1-205ENST00000470232 WNK4Q96J92 1243 aa11.53□□□□□ -0.56
SYNGAP1-205ENST00000470232 COA1Q9GZY4 146 aa11.53□□□□□ -0.56
SYNGAP1-205ENST00000470232 BRCA2P51587 3418 aa11.53□□□□□ -0.56
SYNGAP1-205ENST00000470232 H0YGN5 161 aa11.52□□□□□ -0.57
SYNGAP1-205ENST00000470232 IGF2BP3O00425 579 aaKnown RBP eCLIP11.52□□□□□ -0.57
SYNGAP1-205ENST00000470232 WDHD1O75717 1129 aaPredicted RBP11.52□□□□□ -0.57
SYNGAP1-205ENST00000470232 HOXB7P09629 217 aa11.52□□□□□ -0.57
SYNGAP1-205ENST00000470232 IREB2P48200 963 aaKnown RBP11.52□□□□□ -0.57
SYNGAP1-205ENST00000470232 CRHR2Q13324 411 aa11.52□□□□□ -0.57
SYNGAP1-205ENST00000470232 TTLL5Q6EMB2 1281 aa11.52□□□□□ -0.57
SYNGAP1-205ENST00000470232 ZNF333Q96JL9 665 aa11.52□□□□□ -0.57
SYNGAP1-205ENST00000470232 CDC5LQ99459 802 aaKnown RBP11.52□□□□□ -0.57
SYNGAP1-205ENST00000470232 DEFB129Q9H1M3 183 aa11.52□□□□□ -0.57
SYNGAP1-205ENST00000470232 PPP2R3BQ9Y5P8 575 aa11.52□□□□□ -0.57
SYNGAP1-205ENST00000470232 SZT2Q5T011 3432 aa11.52□□□□□ -0.57
SYNGAP1-205ENST00000470232 COL1A1P02452 1464 aaPredicted RBP11.51□□□□□ -0.57
SYNGAP1-205ENST00000470232 MYO1BO43795 1136 aa11.51□□□□□ -0.57
SYNGAP1-205ENST00000470232 SASH1O94885 1247 aa11.51□□□□□ -0.57
SYNGAP1-205ENST00000470232 GOLGA2Q08379 1002 aa11.51□□□□□ -0.57
SYNGAP1-205ENST00000470232 DLGAP5Q15398 846 aa11.51□□□□□ -0.57
SYNGAP1-205ENST00000470232 CCDC191Q8NCU4 936 aa11.51□□□□□ -0.57
SYNGAP1-205ENST00000470232 OTUD5Q96G74 571 aa11.51□□□□□ -0.57
SYNGAP1-205ENST00000470232 MED23Q9ULK4 1368 aa11.51□□□□□ -0.57
SYNGAP1-205ENST00000470232 PCCAP05165 728 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-205ENST00000470232 KIF22Q14807 665 aa11.5□□□□□ -0.57
SYNGAP1-205ENST00000470232 CHRDL2Q6WN34 429 aa11.5□□□□□ -0.57
SYNGAP1-205ENST00000470232 DPF3Q92784 378 aa11.5□□□□□ -0.57
SYNGAP1-205ENST00000470232 MXD3Q9BW11 206 aa11.5□□□□□ -0.57
SYNGAP1-205ENST00000470232 ZFYVE28Q9HCC9 887 aa11.5□□□□□ -0.57
SYNGAP1-205ENST00000470232 BSDC1Q9NW68 430 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-205ENST00000470232 LEMD3Q9Y2U8 911 aa11.5□□□□□ -0.57
SYNGAP1-205ENST00000470232 LAS1LQ9Y4W2 734 aaKnown RBP11.5□□□□□ -0.57
SYNGAP1-205ENST00000470232 TESPA1A2RU30 521 aaPredicted RBP11.49□□□□□ -0.57
SYNGAP1-205ENST00000470232 CHL1O00533 1208 aa11.49□□□□□ -0.57
SYNGAP1-205ENST00000470232 CCT4P50991 539 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-205ENST00000470232 KIAA0825Q8IV33 1275 aa11.49□□□□□ -0.57
SYNGAP1-205ENST00000470232 ANKRD13AQ8IZ07 590 aa11.49□□□□□ -0.57
SYNGAP1-205ENST00000470232 CCDC85AQ96PX6 553 aaPredicted RBP11.49□□□□□ -0.57
SYNGAP1-205ENST00000470232 CWC25Q9NXE8 425 aaPredicted RBP11.49□□□□□ -0.57
SYNGAP1-205ENST00000470232 MINPP1Q9UNW1 487 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms