RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 TIMELESSQ9UNS1 1208 aa10.59□□□□□ -0.71
COL11A1-208ENST00000470170 TRPA1O75762 1119 aa10.58□□□□□ -0.72
COL11A1-208ENST00000470170 ALX3O95076 343 aa10.58□□□□□ -0.72
COL11A1-208ENST00000470170 SERPINB4P48594 390 aa10.58□□□□□ -0.72
COL11A1-208ENST00000470170 MEGF10Q96KG7 1140 aa10.58□□□□□ -0.72
COL11A1-208ENST00000470170 CARD10Q9BWT7 1032 aa10.58□□□□□ -0.72
COL11A1-208ENST00000470170 MRPL18Q9H0U6 180 aaKnown RBP10.58□□□□□ -0.72
COL11A1-208ENST00000470170 TNFRSF21O75509 655 aa10.57□□□□□ -0.72
COL11A1-208ENST00000470170 EPHA1P21709 976 aa10.57□□□□□ -0.72
COL11A1-208ENST00000470170 B4GALNT3Q6L9W6 998 aa10.57□□□□□ -0.72
COL11A1-208ENST00000470170 HHIPQ96QV1 700 aa10.57□□□□□ -0.72
COL11A1-208ENST00000470170 AKTIPQ9H8T0 292 aa10.57□□□□□ -0.72
COL11A1-208ENST00000470170 FOXD3Q9UJU5 478 aaPredicted RBP10.57□□□□□ -0.72
COL11A1-208ENST00000470170 EREGO14944 169 aa10.56□□□□□ -0.72
COL11A1-208ENST00000470170 PTPRAP18433 802 aa10.56□□□□□ -0.72
COL11A1-208ENST00000470170 RETREG2Q8NC44 543 aa10.56□□□□□ -0.72
COL11A1-208ENST00000470170 DZANK1Q9NVP4 752 aa10.56□□□□□ -0.72
COL11A1-208ENST00000470170 F8W735 103 aaPredicted RBP10.55□□□□□ -0.72
COL11A1-208ENST00000470170 H3BRB1 525 aa10.55□□□□□ -0.72
COL11A1-208ENST00000470170 NFKBIEO00221 500 aa10.55□□□□□ -0.72
COL11A1-208ENST00000470170 PHACTR2O75167 634 aa10.55□□□□□ -0.72
COL11A1-208ENST00000470170 H2AFB1P0C5Y9 115 aa10.55□□□□□ -0.72
COL11A1-208ENST00000470170 H2AFB2P0C5Z0 115 aa10.55□□□□□ -0.72
COL11A1-208ENST00000470170 USP5P45974 858 aa10.55□□□□□ -0.72
COL11A1-208ENST00000470170 PRSS36Q5K4E3 855 aa10.55□□□□□ -0.72
COL11A1-208ENST00000470170 AGGF1Q8N302 714 aaeCLIP10.55□□□□□ -0.72
COL11A1-208ENST00000470170 SNX29Q8TEQ0 813 aa10.55□□□□□ -0.72
COL11A1-208ENST00000470170 TUT1Q9H6E5 874 aaKnown RBP10.55□□□□□ -0.72
COL11A1-208ENST00000470170 TM4SF5O14894 197 aa10.54□□□□□ -0.72
COL11A1-208ENST00000470170 ICMTO60725 284 aa10.54□□□□□ -0.72
COL11A1-208ENST00000470170 FOXD4L6Q3SYB3 417 aaPredicted RBP10.54□□□□□ -0.72
COL11A1-208ENST00000470170 FOXD4L3Q6VB84 417 aaPredicted RBP10.54□□□□□ -0.72
COL11A1-208ENST00000470170 GJD3Q8N144 294 aa10.54□□□□□ -0.72
COL11A1-208ENST00000470170 DCAF11Q8TEB1 546 aa10.54□□□□□ -0.72
COL11A1-208ENST00000470170 PMEPA1Q969W9 287 aa10.54□□□□□ -0.72
COL11A1-208ENST00000470170 ADAM19Q9H013 955 aa10.54□□□□□ -0.72
COL11A1-208ENST00000470170 KCNK4Q9NYG8 393 aa10.54□□□□□ -0.72
COL11A1-208ENST00000470170 EGFL7Q9UHF1 273 aa10.54□□□□□ -0.72
COL11A1-208ENST00000470170 FSCN2O14926 492 aa10.53□□□□□ -0.72
COL11A1-208ENST00000470170 WISP1O95388 367 aa10.53□□□□□ -0.72
COL11A1-208ENST00000470170 EHHADHQ08426 723 aa10.53□□□□□ -0.72
COL11A1-208ENST00000470170 ZMYM1Q5SVZ6 1142 aa10.53□□□□□ -0.72
COL11A1-208ENST00000470170 TMEM130Q8N3G9 435 aa10.53□□□□□ -0.72
COL11A1-208ENST00000470170 FAM177BA6PVY3 158 aa10.52□□□□□ -0.73
COL11A1-208ENST00000470170 PDE2AO00408 941 aaPredicted RBP10.52□□□□□ -0.73
COL11A1-208ENST00000470170 CD68P34810 354 aaPredicted RBP10.52□□□□□ -0.73
COL11A1-208ENST00000470170 FAM117BQ6P1L5 589 aa10.52□□□□□ -0.73
COL11A1-208ENST00000470170 GLYCTKQ8IVS8 523 aa10.52□□□□□ -0.73
COL11A1-208ENST00000470170 Q8N3U1 123 aa10.52□□□□□ -0.73
COL11A1-208ENST00000470170 ECM1Q16610 540 aa10.51□□□□□ -0.73
COL11A1-208ENST00000470170 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.51□□□□□ -0.73
COL11A1-208ENST00000470170 OSMRQ99650 979 aa10.51□□□□□ -0.73
COL11A1-208ENST00000470170 ZKSCAN3Q9BRR0 538 aa10.51□□□□□ -0.73
COL11A1-208ENST00000470170 H3BRJ5 948 aa10.5□□□□□ -0.73
COL11A1-208ENST00000470170 DDX3YO15523 660 aaKnown RBP10.5□□□□□ -0.73
COL11A1-208ENST00000470170 DZIP1LQ8IYY4 767 aaKnown RBP10.5□□□□□ -0.73
COL11A1-208ENST00000470170 LATS2Q9NRM7 1088 aa10.5□□□□□ -0.73
COL11A1-208ENST00000470170 GLB1P16278 677 aa10.49□□□□□ -0.73
COL11A1-208ENST00000470170 XP32Q5T750 250 aa10.49□□□□□ -0.73
COL11A1-208ENST00000470170 ACAD11Q709F0 780 aa10.49□□□□□ -0.73
COL11A1-208ENST00000470170 TMEM102Q8N9M5 508 aaPredicted RBP10.49□□□□□ -0.73
COL11A1-208ENST00000470170 KLHL23Q8NBE8 558 aa10.49□□□□□ -0.73
COL11A1-208ENST00000470170 KLHDC7BQ96G42 594 aa10.49□□□□□ -0.73
COL11A1-208ENST00000470170 SEC31BQ9NQW1 1179 aa10.49□□□□□ -0.73
COL11A1-208ENST00000470170 ADAM11O75078 769 aa10.48□□□□□ -0.73
COL11A1-208ENST00000470170 EDN3P14138 238 aa10.48□□□□□ -0.73
COL11A1-208ENST00000470170 CABP4P57796 275 aa10.48□□□□□ -0.73
COL11A1-208ENST00000470170 Q6ZS46 218 aa10.48□□□□□ -0.73
COL11A1-208ENST00000470170 FOXD4L4Q8WXT5 416 aaPredicted RBP10.48□□□□□ -0.73
COL11A1-208ENST00000470170 BRPF3Q9ULD4 1205 aa10.48□□□□□ -0.73
COL11A1-208ENST00000470170 SOX13Q9UN79 622 aa10.48□□□□□ -0.73
COL11A1-208ENST00000470170 AMOTL2Q9Y2J4 779 aa10.48□□□□□ -0.73
COL11A1-208ENST00000470170 POLR3DP05423 398 aaPredicted RBP10.47□□□□□ -0.73
COL11A1-208ENST00000470170 ARHGAP4P98171 946 aa10.47□□□□□ -0.73
COL11A1-208ENST00000470170 PEAR1Q5VY43 1037 aaPredicted RBP10.47□□□□□ -0.73
COL11A1-208ENST00000470170 TXNDC2Q86VQ3 553 aa10.47□□□□□ -0.73
COL11A1-208ENST00000470170 UBASH3BQ8TF42 649 aa10.47□□□□□ -0.73
COL11A1-208ENST00000470170 SLC7A3Q8WY07 619 aa10.47□□□□□ -0.73
COL11A1-208ENST00000470170 NXPE3Q969Y0 559 aa10.47□□□□□ -0.73
COL11A1-208ENST00000470170 ZFYVE28Q9HCC9 887 aa10.47□□□□□ -0.73
COL11A1-208ENST00000470170 PIP4K2BP78356 416 aa10.46□□□□□ -0.73
COL11A1-208ENST00000470170 DUOXA2Q1HG44 320 aa10.46□□□□□ -0.73
COL11A1-208ENST00000470170 PRR23CQ6ZRP0 262 aa10.46□□□□□ -0.73
COL11A1-208ENST00000470170 HGSNATQ68CP4 663 aa10.45□□□□□ -0.74
COL11A1-208ENST00000470170 KIAA1211Q6ZU35 1233 aa10.45□□□□□ -0.74
COL11A1-208ENST00000470170 UBL7Q96S82 380 aaPredicted RBP10.45□□□□□ -0.74
COL11A1-208ENST00000470170 NLRP12P59046 1061 aa10.44□□□□□ -0.74
COL11A1-208ENST00000470170 ASAP3Q8TDY4 903 aa10.44□□□□□ -0.74
COL11A1-208ENST00000470170 BSNDQ8WZ55 320 aa10.44□□□□□ -0.74
COL11A1-208ENST00000470170 WNT8BQ93098 351 aa10.44□□□□□ -0.74
COL11A1-208ENST00000470170 SCO2A0A1W2PP80 73 aa10.43□□□□□ -0.74
COL11A1-208ENST00000470170 NDUFB5O43674 189 aa10.43□□□□□ -0.74
COL11A1-208ENST00000470170 VN1R5Q7Z5H4 357 aa10.43□□□□□ -0.74
COL11A1-208ENST00000470170 OSGEPQ9NPF4 335 aa10.43□□□□□ -0.74
COL11A1-208ENST00000470170 METTL12A8MUP2 240 aa10.42□□□□□ -0.74
COL11A1-208ENST00000470170 BHLHE41Q9C0J9 482 aaPredicted RBP10.42□□□□□ -0.74
COL11A1-208ENST00000470170 PDE4CQ08493 712 aa10.41□□□□□ -0.74
COL11A1-208ENST00000470170 IKBKEQ14164 716 aa10.41□□□□□ -0.74
COL11A1-208ENST00000470170 USPL1Q5W0Q7 1092 aa10.41□□□□□ -0.74
COL11A1-208ENST00000470170 SOX1O00570 391 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms