RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 FKTNO75072 461 aa16.58■□□□□ 0.24
TRAPPC12-216ENST00000469400 ZNF853P0CG23 659 aa16.58■□□□□ 0.24
TRAPPC12-216ENST00000469400 PTPN12Q05209 780 aaKnown RBP16.58■□□□□ 0.24
TRAPPC12-216ENST00000469400 SREBF2Q12772 1141 aa16.58■□□□□ 0.24
TRAPPC12-216ENST00000469400 CDC5LQ99459 802 aaKnown RBP16.58■□□□□ 0.24
TRAPPC12-216ENST00000469400 METTL22Q9BUU2 404 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC12-216ENST00000469400 CFHR5Q9BXR6 569 aa16.58■□□□□ 0.24
TRAPPC12-216ENST00000469400 MINPP1Q9UNW1 487 aa16.58■□□□□ 0.24
TRAPPC12-216ENST00000469400 MED23Q9ULK4 1368 aa16.58■□□□□ 0.24
TRAPPC12-216ENST00000469400 SASH1O94885 1247 aa16.57■□□□□ 0.24
TRAPPC12-216ENST00000469400 CTSWP56202 376 aa16.57■□□□□ 0.24
TRAPPC12-216ENST00000469400 WDR43Q15061 677 aaKnown RBP eCLIP16.57■□□□□ 0.24
TRAPPC12-216ENST00000469400 STRIP1Q5VSL9 837 aa16.57■□□□□ 0.24
TRAPPC12-216ENST00000469400 FBXW7Q969H0 707 aa16.57■□□□□ 0.24
TRAPPC12-216ENST00000469400 BSDC1Q9NW68 430 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC12-216ENST00000469400 ADAMTS8Q9UP79 889 aa16.57■□□□□ 0.24
TRAPPC12-216ENST00000469400 MYO3BQ8WXR4 1341 aa16.56■□□□□ 0.24
TRAPPC12-216ENST00000469400 MYBBP1AQ9BQG0 1328 aaKnown RBP16.56■□□□□ 0.24
TRAPPC12-216ENST00000469400 CCT4P50991 539 aaKnown RBP16.56■□□□□ 0.24
TRAPPC12-216ENST00000469400 PRKG1Q13976 671 aa16.56■□□□□ 0.24
TRAPPC12-216ENST00000469400 ARMC9Q7Z3E5 817 aa16.56■□□□□ 0.24
TRAPPC12-216ENST00000469400 COA1Q9GZY4 146 aa16.56■□□□□ 0.24
TRAPPC12-216ENST00000469400 LDLRAD1Q5T700 205 aa16.55■□□□□ 0.24
TRAPPC12-216ENST00000469400 SPRYD7Q5W111 196 aa16.55■□□□□ 0.24
TRAPPC12-216ENST00000469400 TXNRD3Q86VQ6 643 aa16.55■□□□□ 0.24
TRAPPC12-216ENST00000469400 TTLL11Q8NHH1 800 aa16.55■□□□□ 0.24
TRAPPC12-216ENST00000469400 GREM2Q9H772 168 aa16.55■□□□□ 0.24
TRAPPC12-216ENST00000469400 IFT57Q9NWB7 429 aa16.55■□□□□ 0.24
TRAPPC12-216ENST00000469400 DDX58O95786 925 aaKnown RBP16.54■□□□□ 0.24
TRAPPC12-216ENST00000469400 MMP14P50281 582 aa16.54■□□□□ 0.24
TRAPPC12-216ENST00000469400 APOBEC3FQ8IUX4 373 aaKnown RBP16.54■□□□□ 0.24
TRAPPC12-216ENST00000469400 ANGEL1Q9UNK9 670 aaKnown RBP16.54■□□□□ 0.24
TRAPPC12-216ENST00000469400 MAP3K2Q9Y2U5 619 aa16.54■□□□□ 0.24
TRAPPC12-216ENST00000469400 ALDH1A1P00352 501 aa16.53■□□□□ 0.24
TRAPPC12-216ENST00000469400 IGKV5-2P06315 115 aa16.53■□□□□ 0.24
TRAPPC12-216ENST00000469400 TTLL5Q6EMB2 1281 aa16.53■□□□□ 0.24
TRAPPC12-216ENST00000469400 KIAA0825Q8IV33 1275 aa16.53■□□□□ 0.24
TRAPPC12-216ENST00000469400 C8orf58Q8NAV2 365 aa16.53■□□□□ 0.24
TRAPPC12-216ENST00000469400 GCC1Q96CN9 775 aa16.53■□□□□ 0.24
TRAPPC12-216ENST00000469400 FZD1Q9UP38 647 aa16.53■□□□□ 0.24
TRAPPC12-216ENST00000469400 KLRK1P26718 216 aa16.52■□□□□ 0.24
TRAPPC12-216ENST00000469400 GNAI1P63096 354 aa16.52■□□□□ 0.24
TRAPPC12-216ENST00000469400 CCDC30Q5VVM6 783 aa16.52■□□□□ 0.24
TRAPPC12-216ENST00000469400 ZBED3Q96IU2 234 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC12-216ENST00000469400 LEMD3Q9Y2U8 911 aa16.52■□□□□ 0.24
TRAPPC12-216ENST00000469400 PI4KAP2A4QPH2 592 aa16.51■□□□□ 0.23
TRAPPC12-216ENST00000469400 KSR2Q6VAB6 950 aa16.51■□□□□ 0.23
TRAPPC12-216ENST00000469400 IFNL1Q8IU54 200 aa16.51■□□□□ 0.23
TRAPPC12-216ENST00000469400 PI4KAP1Q8N8J0 262 aa16.51■□□□□ 0.23
TRAPPC12-216ENST00000469400 SLC10A4Q96EP9 437 aa16.51■□□□□ 0.23
TRAPPC12-216ENST00000469400 TRIM17Q9Y577 477 aa16.51■□□□□ 0.23
TRAPPC12-216ENST00000469400 ZNF804BA4D1E1 1349 aa16.5■□□□□ 0.23
TRAPPC12-216ENST00000469400 MANSC4A6NHS7 340 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC12-216ENST00000469400 IGHMBP2P38935 993 aaKnown RBP16.5■□□□□ 0.23
TRAPPC12-216ENST00000469400 INHBEP58166 350 aa16.5■□□□□ 0.23
TRAPPC12-216ENST00000469400 GTF2IP78347 998 aa16.5■□□□□ 0.23
TRAPPC12-216ENST00000469400 CALD1Q05682 793 aaKnown RBP16.5■□□□□ 0.23
TRAPPC12-216ENST00000469400 OTOP1Q7RTM1 612 aa16.5■□□□□ 0.23
TRAPPC12-216ENST00000469400 DEFB129Q9H1M3 183 aa16.5■□□□□ 0.23
TRAPPC12-216ENST00000469400 POTEFA5A3E0 1075 aa16.49■□□□□ 0.23
TRAPPC12-216ENST00000469400 APAF1O14727 1248 aa16.49■□□□□ 0.23
TRAPPC12-216ENST00000469400 MAP3K11Q16584 847 aa16.49■□□□□ 0.23
TRAPPC12-216ENST00000469400 CWF19L2Q2TBE0 894 aaKnown RBP16.49■□□□□ 0.23
TRAPPC12-216ENST00000469400 HABP4Q5JVS0 413 aaKnown RBP16.49■□□□□ 0.23
TRAPPC12-216ENST00000469400 INTS3Q68E01 1043 aaKnown RBP16.49■□□□□ 0.23
TRAPPC12-216ENST00000469400 CHMP4AQ9BY43 222 aa16.49■□□□□ 0.23
TRAPPC12-216ENST00000469400 ANKRD2Q9GZV1 360 aa16.49■□□□□ 0.23
TRAPPC12-216ENST00000469400 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC12-216ENST00000469400 ZNF646O15015 1829 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC12-216ENST00000469400 H7C1W4 665 aa16.48■□□□□ 0.23
TRAPPC12-216ENST00000469400 IGF2BP3O00425 579 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRAPPC12-216ENST00000469400 ZBTB48P10074 688 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC12-216ENST00000469400 NEXNQ0ZGT2 675 aa16.48■□□□□ 0.23
TRAPPC12-216ENST00000469400 TSPYL6Q8N831 410 aa16.48■□□□□ 0.23
TRAPPC12-216ENST00000469400 CLMNQ96JQ2 1002 aa16.48■□□□□ 0.23
TRAPPC12-216ENST00000469400 NEURL1BA8MQ27 555 aa16.47■□□□□ 0.23
TRAPPC12-216ENST00000469400 ITGA6P23229 1130 aa16.47■□□□□ 0.23
TRAPPC12-216ENST00000469400 DDX10Q13206 875 aaKnown RBP16.47■□□□□ 0.23
TRAPPC12-216ENST00000469400 DLGAP5Q15398 846 aa16.47■□□□□ 0.23
TRAPPC12-216ENST00000469400 UBE3BQ7Z3V4 1068 aa16.47■□□□□ 0.23
TRAPPC12-216ENST00000469400 WNK4Q96J92 1243 aa16.47■□□□□ 0.23
TRAPPC12-216ENST00000469400 MKI67P46013 3256 aaKnown RBP16.47■□□□□ 0.23
TRAPPC12-216ENST00000469400 COL1A1P02452 1464 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC12-216ENST00000469400 HTTP42858 3142 aa16.46■□□□□ 0.23
TRAPPC12-216ENST00000469400 PPP1R12BO60237 982 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC12-216ENST00000469400 CERS5Q8N5B7 392 aa16.46■□□□□ 0.23
TRAPPC12-216ENST00000469400 MTMR14Q8NCE2 650 aa16.46■□□□□ 0.23
TRAPPC12-216ENST00000469400 MPHOSPH8Q99549 860 aa16.46■□□□□ 0.23
TRAPPC12-216ENST00000469400 CD209Q9NNX6 404 aa16.46■□□□□ 0.23
TRAPPC12-216ENST00000469400 PPP2R3BQ9Y5P8 575 aa16.46■□□□□ 0.23
TRAPPC12-216ENST00000469400 KIAA0100Q14667 2235 aaKnown RBP16.45■□□□□ 0.22
TRAPPC12-216ENST00000469400 KCNJ4P48050 445 aa16.45■□□□□ 0.22
TRAPPC12-216ENST00000469400 ERO1AQ96HE7 468 aa16.45■□□□□ 0.22
TRAPPC12-216ENST00000469400 PLA2G12BQ9BX93 195 aa16.45■□□□□ 0.22
TRAPPC12-216ENST00000469400 PTPN22Q9Y2R2 807 aa16.45■□□□□ 0.22
TRAPPC12-216ENST00000469400 PCDHAC2Q9Y5I4 1007 aa16.45■□□□□ 0.22
TRAPPC12-216ENST00000469400 SSC5DA1L4H1 1573 aa16.45■□□□□ 0.22
TRAPPC12-216ENST00000469400 SPEF2Q9C093 1822 aa16.45■□□□□ 0.22
TRAPPC12-216ENST00000469400 UNCXA6NJT0 531 aa16.44■□□□□ 0.22
TRAPPC12-216ENST00000469400 CHRNDQ07001 517 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms