RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 FKBP1BP68106 108 aa15.73■□□□□ 0.11
COL5A1-207ENST00000469093 DACT2Q5SW24 774 aa15.73■□□□□ 0.11
COL5A1-207ENST00000469093 MXD3Q9BW11 206 aa15.73■□□□□ 0.11
COL5A1-207ENST00000469093 STK31Q9BXU1 1019 aa15.73■□□□□ 0.11
COL5A1-207ENST00000469093 SCAF8Q9UPN6 1271 aaKnown RBP15.73■□□□□ 0.11
COL5A1-207ENST00000469093 PITPNM2Q9BZ72 1349 aa15.72■□□□□ 0.11
COL5A1-207ENST00000469093 CCDC27Q2M243 656 aa15.72■□□□□ 0.11
COL5A1-207ENST00000469093 NBPF9Q3BBW0 867 aa15.72■□□□□ 0.11
COL5A1-207ENST00000469093 PRAMEF18Q5VWM3 479 aa15.72■□□□□ 0.11
COL5A1-207ENST00000469093 MOB2Q70IA6 237 aa15.72■□□□□ 0.11
COL5A1-207ENST00000469093 UBE3BQ7Z3V4 1068 aa15.72■□□□□ 0.11
COL5A1-207ENST00000469093 TXNRD3Q86VQ6 643 aa15.72■□□□□ 0.11
COL5A1-207ENST00000469093 WWC1Q8IX03 1113 aa15.72■□□□□ 0.11
COL5A1-207ENST00000469093 TWISTNBQ3B726 338 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-207ENST00000469093 STRIP1Q5VSL9 837 aa15.71■□□□□ 0.11
COL5A1-207ENST00000469093 RASAL3Q86YV0 1011 aa15.71■□□□□ 0.11
COL5A1-207ENST00000469093 REM2Q8IYK8 340 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-207ENST00000469093 OGFOD1Q8N543 542 aa15.71■□□□□ 0.11
COL5A1-207ENST00000469093 COA1Q9GZY4 146 aa15.71■□□□□ 0.11
COL5A1-207ENST00000469093 LEMD3Q9Y2U8 911 aa15.71■□□□□ 0.11
COL5A1-207ENST00000469093 MED23Q9ULK4 1368 aa15.71■□□□□ 0.11
COL5A1-207ENST00000469093 UBE2Q2LH0YL09 131 aa15.7■□□□□ 0.1
COL5A1-207ENST00000469093 WNT10BO00744 389 aa15.7■□□□□ 0.1
COL5A1-207ENST00000469093 GCKRQ14397 625 aa15.7■□□□□ 0.1
COL5A1-207ENST00000469093 PLA2G12BQ9BX93 195 aa15.7■□□□□ 0.1
COL5A1-207ENST00000469093 CSF1RP07333 972 aa15.69■□□□□ 0.1
COL5A1-207ENST00000469093 IGHMBP2P38935 993 aaKnown RBP15.69■□□□□ 0.1
COL5A1-207ENST00000469093 CASP7P55210 303 aa15.69■□□□□ 0.1
COL5A1-207ENST00000469093 ZNF804BA4D1E1 1349 aa15.68■□□□□ 0.1
COL5A1-207ENST00000469093 ITGA6P23229 1130 aa15.68■□□□□ 0.1
COL5A1-207ENST00000469093 KLRK1P26718 216 aa15.68■□□□□ 0.1
COL5A1-207ENST00000469093 FLIIQ13045 1269 aa15.68■□□□□ 0.1
COL5A1-207ENST00000469093 TTLL5Q6EMB2 1281 aa15.68■□□□□ 0.1
COL5A1-207ENST00000469093 FBXW7Q969H0 707 aa15.68■□□□□ 0.1
COL5A1-207ENST00000469093 ANKRD2Q9GZV1 360 aa15.68■□□□□ 0.1
COL5A1-207ENST00000469093 MYO3BQ8WXR4 1341 aa15.68■□□□□ 0.1
COL5A1-207ENST00000469093 MMP14P50281 582 aa15.67■□□□□ 0.1
COL5A1-207ENST00000469093 MPHOSPH8Q99549 860 aa15.67■□□□□ 0.1
COL5A1-207ENST00000469093 IL16Q14005 1332 aa15.67■□□□□ 0.1
COL5A1-207ENST00000469093 PSME4Q14997 1843 aa15.66■□□□□ 0.1
COL5A1-207ENST00000469093 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
COL5A1-207ENST00000469093 LINS1Q8NG48 757 aa15.66■□□□□ 0.1
COL5A1-207ENST00000469093 DNAAF4Q8WXU2 420 aa15.66■□□□□ 0.1
COL5A1-207ENST00000469093 VAMP4O75379 141 aa15.65■□□□□ 0.1
COL5A1-207ENST00000469093 SASH1O94885 1247 aa15.65■□□□□ 0.1
COL5A1-207ENST00000469093 TM4SF4P48230 202 aa15.65■□□□□ 0.1
COL5A1-207ENST00000469093 GTF2IP78347 998 aa15.65■□□□□ 0.1
COL5A1-207ENST00000469093 CHRNDQ07001 517 aa15.65■□□□□ 0.1
COL5A1-207ENST00000469093 FKBP5Q13451 457 aaPredicted RBP15.65■□□□□ 0.1
COL5A1-207ENST00000469093 TTLL12Q14166 644 aaPredicted RBP15.65■□□□□ 0.1
COL5A1-207ENST00000469093 CTU1Q7Z7A3 348 aaKnown RBP15.65■□□□□ 0.1
COL5A1-207ENST00000469093 KIAA0825Q8IV33 1275 aa15.65■□□□□ 0.1
COL5A1-207ENST00000469093 ZBED3Q96IU2 234 aaPredicted RBP15.65■□□□□ 0.1
COL5A1-207ENST00000469093 MYH16Q9H6N6 1097 aa15.65■□□□□ 0.1
COL5A1-207ENST00000469093 AKAP11Q9UKA4 1901 aa15.64■□□□□ 0.09
COL5A1-207ENST00000469093 SNAP23O00161 211 aa15.64■□□□□ 0.09
COL5A1-207ENST00000469093 SLC34A2O95436 690 aa15.64■□□□□ 0.09
COL5A1-207ENST00000469093 TBC1D8O95759 1140 aa15.64■□□□□ 0.09
COL5A1-207ENST00000469093 NF2P35240 595 aa15.64■□□□□ 0.09
COL5A1-207ENST00000469093 CD209Q9NNX6 404 aa15.64■□□□□ 0.09
COL5A1-207ENST00000469093 HDAC9Q9UKV0 1011 aa15.64■□□□□ 0.09
COL5A1-207ENST00000469093 PAPPA2Q9BXP8 1791 aa15.64■□□□□ 0.09
COL5A1-207ENST00000469093 ANKRD18BA2A2Z9 1011 aa15.63■□□□□ 0.09
COL5A1-207ENST00000469093 KCNJ4P48050 445 aa15.63■□□□□ 0.09
COL5A1-207ENST00000469093 PTPN12Q05209 780 aaKnown RBP15.63■□□□□ 0.09
COL5A1-207ENST00000469093 FANCIQ9NVI1 1328 aa15.63■□□□□ 0.09
COL5A1-207ENST00000469093 IRS2Q9Y4H2 1338 aa15.63■□□□□ 0.09
COL5A1-207ENST00000469093 TAF5LO75529 589 aa15.62■□□□□ 0.09
COL5A1-207ENST00000469093 SOX10P56693 466 aa15.62■□□□□ 0.09
COL5A1-207ENST00000469093 FOXO4P98177 505 aa15.62■□□□□ 0.09
COL5A1-207ENST00000469093 MKRN3Q13064 507 aaKnown RBP15.62■□□□□ 0.09
COL5A1-207ENST00000469093 LDLRAD1Q5T700 205 aa15.62■□□□□ 0.09
COL5A1-207ENST00000469093 C15orf52Q6ZUT6 534 aaKnown RBP15.62■□□□□ 0.09
COL5A1-207ENST00000469093 APOBEC3FQ8IUX4 373 aaKnown RBP15.62■□□□□ 0.09
COL5A1-207ENST00000469093 HELBQ8NG08 1087 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-207ENST00000469093 ZNF296Q8WUU4 475 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-207ENST00000469093 PDE4DIPQ5VU43 2346 aa15.62■□□□□ 0.09
COL5A1-207ENST00000469093 MYH3P11055 1940 aa15.62■□□□□ 0.09
COL5A1-207ENST00000469093 IFIT5Q13325 482 aaKnown RBP15.61■□□□□ 0.09
COL5A1-207ENST00000469093 PRKG1Q13976 671 aa15.61■□□□□ 0.09
COL5A1-207ENST00000469093 BEND3Q5T5X7 828 aa15.61■□□□□ 0.09
COL5A1-207ENST00000469093 ARMC9Q7Z3E5 817 aa15.61■□□□□ 0.09
COL5A1-207ENST00000469093 WDR63Q8IWG1 891 aa15.61■□□□□ 0.09
COL5A1-207ENST00000469093 CERS5Q8N5B7 392 aa15.61■□□□□ 0.09
COL5A1-207ENST00000469093 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-207ENST00000469093 F6X3S4 739 aa15.6■□□□□ 0.09
COL5A1-207ENST00000469093 EXOSC9Q06265 439 aaKnown RBP15.6■□□□□ 0.09
COL5A1-207ENST00000469093 DLGAP5Q15398 846 aa15.6■□□□□ 0.09
COL5A1-207ENST00000469093 PKN2Q16513 984 aaKnown RBP15.6■□□□□ 0.09
COL5A1-207ENST00000469093 DEFB129Q9H1M3 183 aa15.6■□□□□ 0.09
COL5A1-207ENST00000469093 HPS5Q9UPZ3 1129 aa15.6■□□□□ 0.09
COL5A1-207ENST00000469093 GPR25O00155 361 aa15.59■□□□□ 0.09
COL5A1-207ENST00000469093 IL1R1P14778 569 aa15.59■□□□□ 0.09
COL5A1-207ENST00000469093 NOM1Q5C9Z4 860 aaKnown RBP15.59■□□□□ 0.09
COL5A1-207ENST00000469093 EPHA10Q5JZY3 1008 aa15.59■□□□□ 0.09
COL5A1-207ENST00000469093 SPRYD7Q5W111 196 aa15.59■□□□□ 0.09
COL5A1-207ENST00000469093 MTMR14Q8NCE2 650 aa15.59■□□□□ 0.09
COL5A1-207ENST00000469093 MRS2Q9HD23 443 aa15.59■□□□□ 0.09
COL5A1-207ENST00000469093 ANGEL1Q9UNK9 670 aaKnown RBP15.59■□□□□ 0.09
COL5A1-207ENST00000469093 FZD1Q9UP38 647 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms