RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 NSFL1CQ9UNZ2 370 aaKnown RBP21.4■■□□□ 1.02
RPL39-202ENST00000468844 CD2APQ9Y5K6 639 aa21.4■■□□□ 1.02
RPL39-202ENST00000468844 ZNF804BA4D1E1 1349 aa21.4■■□□□ 1.02
RPL39-202ENST00000468844 IFIT1P09914 478 aaKnown RBP21.39■■□□□ 1.02
RPL39-202ENST00000468844 KLHL34Q8N239 644 aa21.39■■□□□ 1.02
RPL39-202ENST00000468844 PODXL2Q9NZ53 605 aa21.39■■□□□ 1.02
RPL39-202ENST00000468844 FER1L6Q2WGJ9 1857 aa21.39■■□□□ 1.01
RPL39-202ENST00000468844 ATP5JP18859 108 aa21.39■■□□□ 1.01
RPL39-202ENST00000468844 GORABQ5T7V8 394 aa21.39■■□□□ 1.01
RPL39-202ENST00000468844 SNED1Q8TER0 1413 aa21.38■■□□□ 1.01
RPL39-202ENST00000468844 SOCS7O14512 581 aa21.38■■□□□ 1.01
RPL39-202ENST00000468844 KLRK1P26718 216 aa21.38■■□□□ 1.01
RPL39-202ENST00000468844 KCNJ4P48050 445 aa21.38■■□□□ 1.01
RPL39-202ENST00000468844 DOCK2Q92608 1830 aa21.38■■□□□ 1.01
RPL39-202ENST00000468844 IRS2Q9Y4H2 1338 aa21.38■■□□□ 1.01
RPL39-202ENST00000468844 CCDC158Q5M9N0 1113 aa21.37■■□□□ 1.01
RPL39-202ENST00000468844 CCDC102BQ68D86 513 aa21.37■■□□□ 1.01
RPL39-202ENST00000468844 TTLL6Q8N841 843 aa21.37■■□□□ 1.01
RPL39-202ENST00000468844 C7orf43Q8WVR3 580 aa21.37■■□□□ 1.01
RPL39-202ENST00000468844 BOLA2Q9H3K6 86 aa21.37■■□□□ 1.01
RPL39-202ENST00000468844 LEMD3Q9Y2U8 911 aa21.37■■□□□ 1.01
RPL39-202ENST00000468844 SDSP20132 328 aa21.37■■□□□ 1.01
RPL39-202ENST00000468844 PHKA1P46020 1223 aa21.37■■□□□ 1.01
RPL39-202ENST00000468844 MAP4K4O95819 1239 aaPredicted RBP21.36■■□□□ 1.01
RPL39-202ENST00000468844 BCAMP50895 628 aa21.35■■□□□ 1.01
RPL39-202ENST00000468844 TTC39AQ5SRH9 613 aa21.35■■□□□ 1.01
RPL39-202ENST00000468844 TXNRD3Q86VQ6 643 aa21.35■■□□□ 1.01
RPL39-202ENST00000468844 TBC1D16Q8TBP0 767 aa21.35■■□□□ 1.01
RPL39-202ENST00000468844 POLLQ9UGP5 575 aa21.35■■□□□ 1.01
RPL39-202ENST00000468844 GGA1Q9UJY5 639 aa21.35■■□□□ 1.01
RPL39-202ENST00000468844 NDUFB9Q9Y6M9 179 aa21.35■■□□□ 1.01
RPL39-202ENST00000468844 UFL1O94874 794 aa21.35■■□□□ 1.01
RPL39-202ENST00000468844 GYG1P46976 350 aa21.35■■□□□ 1.01
RPL39-202ENST00000468844 FAM84BQ96KN1 310 aaPredicted RBP21.35■■□□□ 1.01
RPL39-202ENST00000468844 GPR101Q96P66 508 aaPredicted RBP21.35■■□□□ 1.01
RPL39-202ENST00000468844 PIM2Q9P1W9 311 aa21.35■■□□□ 1.01
RPL39-202ENST00000468844 ZNF219Q9P2Y4 722 aaPredicted RBP21.35■■□□□ 1.01
RPL39-202ENST00000468844 TRIM6-TRIM34B2RNG4 842 aa21.34■■□□□ 1.01
RPL39-202ENST00000468844 ATP2B4P23634 1241 aa21.34■■□□□ 1.01
RPL39-202ENST00000468844 ARID4AP29374 1257 aaPredicted RBP21.34■■□□□ 1.01
RPL39-202ENST00000468844 SCARF1Q14162 830 aa21.34■■□□□ 1.01
RPL39-202ENST00000468844 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.34■■□□□ 1.01
RPL39-202ENST00000468844 ZNF512BQ96KM6 892 aaPredicted RBP21.34■■□□□ 1.01
RPL39-202ENST00000468844 CCDC88AQ3V6T2 1871 aa21.34■■□□□ 1.01
RPL39-202ENST00000468844 MCAMP43121 646 aa21.33■■□□□ 1.01
RPL39-202ENST00000468844 MPNDQ8N594 471 aa21.33■■□□□ 1.01
RPL39-202ENST00000468844 NLGN2Q8NFZ4 835 aa21.33■■□□□ 1.01
RPL39-202ENST00000468844 TMX4Q9H1E5 349 aaPredicted RBP21.33■■□□□ 1.01
RPL39-202ENST00000468844 WWC3Q9ULE0 1092 aa21.33■■□□□ 1.01
RPL39-202ENST00000468844 C21orf2O43822 256 aa21.33■■□□□ 1
RPL39-202ENST00000468844 C8orf34Q49A92 452 aa21.33■■□□□ 1
RPL39-202ENST00000468844 DPP8Q6V1X1 898 aaPredicted RBP21.33■■□□□ 1
RPL39-202ENST00000468844 HAUS7Q99871 368 aa21.33■■□□□ 1
RPL39-202ENST00000468844 CAVIN4Q5BKX8 364 aa21.32■■□□□ 1
RPL39-202ENST00000468844 PI16Q6UXB8 463 aa21.32■■□□□ 1
RPL39-202ENST00000468844 RILPL2Q969X0 211 aa21.32■■□□□ 1
RPL39-202ENST00000468844 EDC3Q96F86 508 aaKnown RBP21.32■■□□□ 1
RPL39-202ENST00000468844 DNAJC2Q99543 621 aaKnown RBP21.32■■□□□ 1
RPL39-202ENST00000468844 MED23Q9ULK4 1368 aa21.32■■□□□ 1
RPL39-202ENST00000468844 COL1A1P02452 1464 aaPredicted RBP21.31■■□□□ 1
RPL39-202ENST00000468844 C6orf229H3BNL8 230 aa21.31■■□□□ 1
RPL39-202ENST00000468844 RASGRF1Q13972 1273 aa21.31■■□□□ 1
RPL39-202ENST00000468844 C15orf52Q6ZUT6 534 aaKnown RBP21.31■■□□□ 1
RPL39-202ENST00000468844 FBXO33Q7Z6M2 555 aa21.31■■□□□ 1
RPL39-202ENST00000468844 CNTROBQ8N137 903 aa21.31■■□□□ 1
RPL39-202ENST00000468844 SCN9AQ15858 1988 aa21.31■■□□□ 1
RPL39-202ENST00000468844 UQCRFS1P1P0C7P4 283 aa21.3■■□□□ 1
RPL39-202ENST00000468844 CC2D2BQ6DHV5 1058 aa21.3■■□□□ 1
RPL39-202ENST00000468844 VPS37DQ86XT2 251 aa21.3■■□□□ 1
RPL39-202ENST00000468844 FHDC1Q9C0D6 1143 aaPredicted RBP21.3■■□□□ 1
RPL39-202ENST00000468844 SNRKQ9NRH2 765 aa21.3■■□□□ 1
RPL39-202ENST00000468844 ZNF646O15015 1829 aaPredicted RBP21.29■■□□□ 1
RPL39-202ENST00000468844 DALRD3Q5D0E6 543 aaKnown RBP21.29■■□□□ 1
RPL39-202ENST00000468844 IQSEC3Q9UPP2 1182 aaPredicted RBP21.29■■□□□ 1
RPL39-202ENST00000468844 PSME4Q14997 1843 aa21.29■■□□□ 1
RPL39-202ENST00000468844 HIBADHP31937 336 aaKnown RBP21.29■■□□□ 1
RPL39-202ENST00000468844 FKBP4Q02790 459 aaKnown RBP eCLIP21.29■■□□□ 1
RPL39-202ENST00000468844 EVI5LQ96CN4 794 aa21.29■■□□□ 1
RPL39-202ENST00000468844 PAG1Q9NWQ8 432 aa21.29■■□□□ 1
RPL39-202ENST00000468844 HMG20BQ9P0W2 317 aa21.29■■□□□ 1
RPL39-202ENST00000468844 ZAP70P43403 619 aa21.28■■□□□ 1
RPL39-202ENST00000468844 ANTXR1Q9H6X2 564 aa21.28■■□□□ 1
RPL39-202ENST00000468844 GOLIM4O00461 696 aa21.27■■□□□ 1
RPL39-202ENST00000468844 CCDC93Q567U6 631 aa21.27■■□□□ 1
RPL39-202ENST00000468844 SPATA5Q8NB90 893 aa21.27■■□□□ 1
RPL39-202ENST00000468844 RTFDC1Q9BY42 306 aaPredicted RBP21.27■■□□□ 1
RPL39-202ENST00000468844 GNL3LQ9NVN8 582 aaKnown RBP21.27■■□□□ 1
RPL39-202ENST00000468844 CDC45O75419 566 aa21.26■□□□□ 0.99
RPL39-202ENST00000468844 CYP2E1P05181 493 aaPredicted RBP21.26■□□□□ 0.99
RPL39-202ENST00000468844 TBC1D9Q6ZT07 1266 aa21.26■□□□□ 0.99
RPL39-202ENST00000468844 ZNF804AQ7Z570 1209 aa21.26■□□□□ 0.99
RPL39-202ENST00000468844 BACH2Q9BYV9 841 aa21.26■□□□□ 0.99
RPL39-202ENST00000468844 WASHC4Q2M389 1173 aa21.25■□□□□ 0.99
RPL39-202ENST00000468844 RIMBP2O15034 1052 aa21.25■□□□□ 0.99
RPL39-202ENST00000468844 GRIPAP1Q4V328 841 aa21.25■□□□□ 0.99
RPL39-202ENST00000468844 BCS1LQ9Y276 419 aa21.25■□□□□ 0.99
RPL39-202ENST00000468844 SBF1O95248 1867 aa21.24■□□□□ 0.99
RPL39-202ENST00000468844 RTKN2Q8IZC4 609 aa21.24■□□□□ 0.99
RPL39-202ENST00000468844 KBTBD3Q8NAB2 608 aa21.24■□□□□ 0.99
RPL39-202ENST00000468844 SYT17Q9BSW7 474 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms