RNA–Protein interactions for RNA: ENST00000468654.1

SHANK1-206, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 668 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-206ENST00000468654 BEGAINQ9BUH8 593 aa26.85■■□□□ 1.89
SHANK1-206ENST00000468654 WTIPA6NIX2 430 aaPredicted RBP26.84■■□□□ 1.89
SHANK1-206ENST00000468654 F6X3S4 739 aa26.84■■□□□ 1.89
SHANK1-206ENST00000468654 ZNF280AP59817 542 aaPredicted RBP26.84■■□□□ 1.89
SHANK1-206ENST00000468654 BEND3Q5T5X7 828 aa26.84■■□□□ 1.89
SHANK1-206ENST00000468654 ASTN2O75129 1339 aaPredicted RBP26.84■■□□□ 1.89
SHANK1-206ENST00000468654 RBM26Q5T8P6 1007 aaKnown RBP26.83■■□□□ 1.89
SHANK1-206ENST00000468654 GGA3Q9NZ52 723 aa26.83■■□□□ 1.89
SHANK1-206ENST00000468654 BRPF1P55201 1214 aaPredicted RBP26.82■■□□□ 1.88
SHANK1-206ENST00000468654 GMLQ99445 158 aa26.82■■□□□ 1.88
SHANK1-206ENST00000468654 USP17L3A6NCW0 530 aa26.81■■□□□ 1.88
SHANK1-206ENST00000468654 USP17L4A6NCW7 530 aa26.81■■□□□ 1.88
SHANK1-206ENST00000468654 HUNKP57058 714 aa26.81■■□□□ 1.88
SHANK1-206ENST00000468654 USP17L1Q7RTZ2 530 aa26.81■■□□□ 1.88
SHANK1-206ENST00000468654 DCPSQ96C86 337 aaKnown RBP26.81■■□□□ 1.88
SHANK1-206ENST00000468654 ABHD8Q96I13 439 aa26.81■■□□□ 1.88
SHANK1-206ENST00000468654 LEMD3Q9Y2U8 911 aa26.81■■□□□ 1.88
SHANK1-206ENST00000468654 ZIC5Q96T25 663 aa26.8■■□□□ 1.88
SHANK1-206ENST00000468654 MPHOSPH8Q99549 860 aa26.8■■□□□ 1.88
SHANK1-206ENST00000468654 ANKRD2Q9GZV1 360 aa26.8■■□□□ 1.88
SHANK1-206ENST00000468654 GBA2Q9HCG7 927 aaPredicted RBP26.79■■□□□ 1.88
SHANK1-206ENST00000468654 FOXO4P98177 505 aa26.78■■□□□ 1.88
SHANK1-206ENST00000468654 COA1Q9GZY4 146 aa26.78■■□□□ 1.88
SHANK1-206ENST00000468654 ARAP2Q8WZ64 1704 aa26.78■■□□□ 1.88
SHANK1-206ENST00000468654 ZNF804BA4D1E1 1349 aa26.77■■□□□ 1.88
SHANK1-206ENST00000468654 ANKRD18BA2A2Z9 1011 aa26.77■■□□□ 1.88
SHANK1-206ENST00000468654 USP17L8P0C7I0 530 aa26.77■■□□□ 1.88
SHANK1-206ENST00000468654 NOGQ13253 232 aa26.77■■□□□ 1.88
SHANK1-206ENST00000468654 TXNRD3Q86VQ6 643 aa26.77■■□□□ 1.88
SHANK1-206ENST00000468654 FAM155AB1AL88 458 aaPredicted RBP26.76■■□□□ 1.87
SHANK1-206ENST00000468654 GRM8O00222 908 aa26.76■■□□□ 1.87
SHANK1-206ENST00000468654 CA12O43570 354 aa26.76■■□□□ 1.87
SHANK1-206ENST00000468654 CHRNDQ07001 517 aa26.76■■□□□ 1.87
SHANK1-206ENST00000468654 DACT2Q5SW24 774 aa26.76■■□□□ 1.87
SHANK1-206ENST00000468654 LAMB1P07942 1786 aa26.76■■□□□ 1.87
SHANK1-206ENST00000468654 KLRK1P26718 216 aa26.75■■□□□ 1.87
SHANK1-206ENST00000468654 SULF1Q8IWU6 871 aa26.75■■□□□ 1.87
SHANK1-206ENST00000468654 MYOZ2Q9NPC6 264 aa26.75■■□□□ 1.87
SHANK1-206ENST00000468654 ALDH1L1O75891 902 aa26.74■■□□□ 1.87
SHANK1-206ENST00000468654 IFIT5Q13325 482 aaKnown RBP26.74■■□□□ 1.87
SHANK1-206ENST00000468654 STRIP1Q5VSL9 837 aa26.74■■□□□ 1.87
SHANK1-206ENST00000468654 ANGEL2Q5VTE6 544 aaKnown RBP26.74■■□□□ 1.87
SHANK1-206ENST00000468654 CDCA5Q96FF9 252 aa26.74■■□□□ 1.87
SHANK1-206ENST00000468654 MYO3BQ8WXR4 1341 aa26.73■■□□□ 1.87
SHANK1-206ENST00000468654 SCARF1Q14162 830 aa26.73■■□□□ 1.87
SHANK1-206ENST00000468654 EPHA10Q5JZY3 1008 aa26.73■■□□□ 1.87
SHANK1-206ENST00000468654 RGMBQ6NW40 437 aa26.73■■□□□ 1.87
SHANK1-206ENST00000468654 PITPNM2Q9BZ72 1349 aa26.72■■□□□ 1.87
SHANK1-206ENST00000468654 LMBR1LQ6UX01 489 aa26.72■■□□□ 1.87
SHANK1-206ENST00000468654 C2orf69Q8N8R5 385 aa26.72■■□□□ 1.87
SHANK1-206ENST00000468654 CHMP3Q9Y3E7 222 aa26.72■■□□□ 1.87
SHANK1-206ENST00000468654 IRS2Q9Y4H2 1338 aa26.71■■□□□ 1.87
SHANK1-206ENST00000468654 KCNJ4P48050 445 aa26.71■■□□□ 1.87
SHANK1-206ENST00000468654 SLC4A10Q6U841 1118 aa26.71■■□□□ 1.87
SHANK1-206ENST00000468654 MXD3Q9BW11 206 aa26.71■■□□□ 1.87
SHANK1-206ENST00000468654 SRCIN1Q9C0H9 1055 aa26.71■■□□□ 1.87
SHANK1-206ENST00000468654 E9PSI1 815 aa26.7■■□□□ 1.86
SHANK1-206ENST00000468654 FBXW7Q969H0 707 aa26.7■■□□□ 1.86
SHANK1-206ENST00000468654 C9orf78Q9NZ63 289 aaPredicted RBP26.7■■□□□ 1.86
SHANK1-206ENST00000468654 SLC10A3P09131 477 aa26.69■■□□□ 1.86
SHANK1-206ENST00000468654 C15orf52Q6ZUT6 534 aaKnown RBP26.69■■□□□ 1.86
SHANK1-206ENST00000468654 SNAP23O00161 211 aa26.68■■□□□ 1.86
SHANK1-206ENST00000468654 OGFOD1Q8N543 542 aa26.68■■□□□ 1.86
SHANK1-206ENST00000468654 MRPL50Q8N5N7 158 aaKnown RBP26.68■■□□□ 1.86
SHANK1-206ENST00000468654 TAF5LO75529 589 aa26.67■■□□□ 1.86
SHANK1-206ENST00000468654 MMP14P50281 582 aa26.67■■□□□ 1.86
SHANK1-206ENST00000468654 ZNF157P51786 506 aaPredicted RBP26.67■■□□□ 1.86
SHANK1-206ENST00000468654 CCDC57Q2TAC2 916 aa26.67■■□□□ 1.86
SHANK1-206ENST00000468654 TTLL5Q6EMB2 1281 aa26.67■■□□□ 1.86
SHANK1-206ENST00000468654 HELBQ8NG08 1087 aaPredicted RBP26.67■■□□□ 1.86
SHANK1-206ENST00000468654 CD209Q9NNX6 404 aa26.67■■□□□ 1.86
SHANK1-206ENST00000468654 SCAF8Q9UPN6 1271 aaKnown RBP26.67■■□□□ 1.86
SHANK1-206ENST00000468654 OTOFQ9HC10 1997 aa26.66■■□□□ 1.86
SHANK1-206ENST00000468654 SUCLG2Q96I99 432 aa26.66■■□□□ 1.86
SHANK1-206ENST00000468654 UTYO14607 1347 aa26.65■■□□□ 1.86
SHANK1-206ENST00000468654 GTF2IP78347 998 aa26.65■■□□□ 1.86
SHANK1-206ENST00000468654 NBPF9Q3BBW0 867 aa26.65■■□□□ 1.86
SHANK1-206ENST00000468654 TAF7LQ5H9L4 462 aa26.65■■□□□ 1.86
SHANK1-206ENST00000468654 CCDC102AQ96A19 550 aa26.65■■□□□ 1.86
SHANK1-206ENST00000468654 ZNF594Q96JF6 807 aaPredicted RBP26.65■■□□□ 1.86
SHANK1-206ENST00000468654 MCOLN1Q9GZU1 580 aa26.65■■□□□ 1.86
SHANK1-206ENST00000468654 TNRC18O15417 2968 aaPredicted RBP26.65■■□□□ 1.86
SHANK1-206ENST00000468654 PTPRCP08575 1304 aa26.65■■□□□ 1.86
SHANK1-206ENST00000468654 WNT10BO00744 389 aa26.64■■□□□ 1.86
SHANK1-206ENST00000468654 KIF23Q02241 960 aaPredicted RBP26.64■■□□□ 1.86
SHANK1-206ENST00000468654 SLFN5Q08AF3 891 aa26.64■■□□□ 1.86
SHANK1-206ENST00000468654 LDHAL6AQ6ZMR3 332 aa26.64■■□□□ 1.86
SHANK1-206ENST00000468654 RASAL3Q86YV0 1011 aa26.64■■□□□ 1.86
SHANK1-206ENST00000468654 KAZALD1Q96I82 304 aa26.64■■□□□ 1.86
SHANK1-206ENST00000468654 CNNM1Q9NRU3 951 aa26.63■■□□□ 1.85
SHANK1-206ENST00000468654 SAGE1Q9NXZ1 904 aa26.63■■□□□ 1.85
SHANK1-206ENST00000468654 MYH13Q9UKX3 1938 aa26.63■■□□□ 1.85
SHANK1-206ENST00000468654 NBPF7P0C2Y1 421 aaPredicted RBP26.62■■□□□ 1.85
SHANK1-206ENST00000468654 FKBP1BP68106 108 aa26.62■■□□□ 1.85
SHANK1-206ENST00000468654 ZNF804AQ7Z570 1209 aa26.62■■□□□ 1.85
SHANK1-206ENST00000468654 KIAA0825Q8IV33 1275 aa26.62■■□□□ 1.85
SHANK1-206ENST00000468654 SSH1Q8WYL5 1049 aa26.62■■□□□ 1.85
SHANK1-206ENST00000468654 HDAC9Q9UKV0 1011 aa26.62■■□□□ 1.85
SHANK1-206ENST00000468654 CCDC85CA6NKD9 419 aa26.61■■□□□ 1.85
SHANK1-206ENST00000468654 IL1R1P14778 569 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms