RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 ASTN2O75129 1339 aaPredicted RBP17.03■□□□□ 0.32
C9orf3-212ENST00000468164 CSF1RP07333 972 aa17.03■□□□□ 0.32
C9orf3-212ENST00000468164 KLRK1P26718 216 aa17.03■□□□□ 0.32
C9orf3-212ENST00000468164 CTCFP49711 727 aaPredicted RBP17.03■□□□□ 0.32
C9orf3-212ENST00000468164 IFIT5Q13325 482 aaKnown RBP17.03■□□□□ 0.32
C9orf3-212ENST00000468164 TAF7LQ5H9L4 462 aa17.03■□□□□ 0.32
C9orf3-212ENST00000468164 SAPCD2Q86UD0 394 aa17.03■□□□□ 0.32
C9orf3-212ENST00000468164 TXNRD3Q86VQ6 643 aa17.03■□□□□ 0.32
C9orf3-212ENST00000468164 AGBL3Q8NEM8 1001 aa17.03■□□□□ 0.32
C9orf3-212ENST00000468164 HELBQ8NG08 1087 aaPredicted RBP17.03■□□□□ 0.32
C9orf3-212ENST00000468164 MXD3Q9BW11 206 aa17.03■□□□□ 0.32
C9orf3-212ENST00000468164 WBP1LQ9NX94 342 aa17.03■□□□□ 0.32
C9orf3-212ENST00000468164 LEMD3Q9Y2U8 911 aa17.03■□□□□ 0.32
C9orf3-212ENST00000468164 AKAP11Q9UKA4 1901 aa17.03■□□□□ 0.32
C9orf3-212ENST00000468164 ZNF521Q96K83 1311 aa17.02■□□□□ 0.32
C9orf3-212ENST00000468164 GRM8O00222 908 aa17.02■□□□□ 0.32
C9orf3-212ENST00000468164 TAF5LO75529 589 aa17.02■□□□□ 0.32
C9orf3-212ENST00000468164 USP17L8P0C7I0 530 aa17.02■□□□□ 0.32
C9orf3-212ENST00000468164 LBX1P52954 281 aa17.02■□□□□ 0.32
C9orf3-212ENST00000468164 FOXO4P98177 505 aa17.02■□□□□ 0.32
C9orf3-212ENST00000468164 MAP2K1Q02750 393 aaPredicted RBP17.02■□□□□ 0.32
C9orf3-212ENST00000468164 CHRNDQ07001 517 aa17.02■□□□□ 0.32
C9orf3-212ENST00000468164 LMBR1LQ6UX01 489 aa17.02■□□□□ 0.32
C9orf3-212ENST00000468164 SULF1Q8IWU6 871 aa17.02■□□□□ 0.32
C9orf3-212ENST00000468164 BEGAINQ9BUH8 593 aa17.02■□□□□ 0.32
C9orf3-212ENST00000468164 SRCIN1Q9C0H9 1055 aa17.02■□□□□ 0.32
C9orf3-212ENST00000468164 ECM29Q5VYK3 1845 aa17.01■□□□□ 0.31
C9orf3-212ENST00000468164 CASP8AP2Q9UKL3 1982 aa17.01■□□□□ 0.31
C9orf3-212ENST00000468164 PLIN1O60240 522 aa17.01■□□□□ 0.31
C9orf3-212ENST00000468164 HUNKP57058 714 aa17.01■□□□□ 0.31
C9orf3-212ENST00000468164 SCARF1Q14162 830 aa17.01■□□□□ 0.31
C9orf3-212ENST00000468164 EPHA10Q5JZY3 1008 aa17.01■□□□□ 0.31
C9orf3-212ENST00000468164 ANGEL2Q5VTE6 544 aaKnown RBP17.01■□□□□ 0.31
C9orf3-212ENST00000468164 ZNF594Q96JF6 807 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-212ENST00000468164 MYOZ2Q9NPC6 264 aa17.01■□□□□ 0.31
C9orf3-212ENST00000468164 SCAF8Q9UPN6 1271 aaKnown RBP17.01■□□□□ 0.31
C9orf3-212ENST00000468164 SNAP23O00161 211 aa17■□□□□ 0.31
C9orf3-212ENST00000468164 ZNF280AP59817 542 aaPredicted RBP17■□□□□ 0.31
C9orf3-212ENST00000468164 CCDC57Q2TAC2 916 aa17■□□□□ 0.31
C9orf3-212ENST00000468164 COA1Q9GZY4 146 aa17■□□□□ 0.31
C9orf3-212ENST00000468164 ALDH1L1O75891 902 aa16.99■□□□□ 0.31
C9orf3-212ENST00000468164 DACT2Q5SW24 774 aa16.99■□□□□ 0.31
C9orf3-212ENST00000468164 C2orf69Q8N8R5 385 aa16.99■□□□□ 0.31
C9orf3-212ENST00000468164 CNNM1Q9NRU3 951 aa16.99■□□□□ 0.31
C9orf3-212ENST00000468164 TSKSQ9UJT2 592 aa16.99■□□□□ 0.31
C9orf3-212ENST00000468164 ZNF609O15014 1411 aa16.98■□□□□ 0.31
C9orf3-212ENST00000468164 E9PSI1 815 aa16.98■□□□□ 0.31
C9orf3-212ENST00000468164 GTF2IP78347 998 aa16.98■□□□□ 0.31
C9orf3-212ENST00000468164 TTLL5Q6EMB2 1281 aa16.98■□□□□ 0.31
C9orf3-212ENST00000468164 OGFOD1Q8N543 542 aa16.98■□□□□ 0.31
C9orf3-212ENST00000468164 MRPL50Q8N5N7 158 aaKnown RBP16.98■□□□□ 0.31
C9orf3-212ENST00000468164 GMLQ99445 158 aa16.98■□□□□ 0.31
C9orf3-212ENST00000468164 GBA2Q9HCG7 927 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-212ENST00000468164 MYH13Q9UKX3 1938 aa16.98■□□□□ 0.31
C9orf3-212ENST00000468164 HSPA8P11142 646 aaKnown RBP16.97■□□□□ 0.31
C9orf3-212ENST00000468164 LDHAL6AQ6ZMR3 332 aa16.97■□□□□ 0.31
C9orf3-212ENST00000468164 KIAA0825Q8IV33 1275 aa16.97■□□□□ 0.31
C9orf3-212ENST00000468164 CDCA5Q96FF9 252 aa16.97■□□□□ 0.31
C9orf3-212ENST00000468164 CDCA7LQ96GN5 454 aa16.97■□□□□ 0.31
C9orf3-212ENST00000468164 SUCLG2Q96I99 432 aa16.97■□□□□ 0.31
C9orf3-212ENST00000468164 PRDM10Q9NQV6 1147 aa16.97■□□□□ 0.31
C9orf3-212ENST00000468164 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.31
C9orf3-212ENST00000468164 NBPF7P0C2Y1 421 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-212ENST00000468164 MAP2K2P36507 400 aa16.96■□□□□ 0.31
C9orf3-212ENST00000468164 NBPF9Q3BBW0 867 aa16.96■□□□□ 0.31
C9orf3-212ENST00000468164 STRIP1Q5VSL9 837 aa16.96■□□□□ 0.31
C9orf3-212ENST00000468164 SSH1Q8WYL5 1049 aa16.96■□□□□ 0.31
C9orf3-212ENST00000468164 HHIPL1Q96JK4 782 aa16.96■□□□□ 0.31
C9orf3-212ENST00000468164 SASH1O94885 1247 aa16.95■□□□□ 0.3
C9orf3-212ENST00000468164 SLFN5Q08AF3 891 aa16.95■□□□□ 0.3
C9orf3-212ENST00000468164 CD209Q9NNX6 404 aa16.95■□□□□ 0.3
C9orf3-212ENST00000468164 JAG2Q9Y219 1238 aa16.95■□□□□ 0.3
C9orf3-212ENST00000468164 ZNF157P51786 506 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-212ENST00000468164 PRAMEF18Q5VWM3 479 aa16.94■□□□□ 0.3
C9orf3-212ENST00000468164 RGMBQ6NW40 437 aa16.94■□□□□ 0.3
C9orf3-212ENST00000468164 ZNF804AQ7Z570 1209 aa16.94■□□□□ 0.3
C9orf3-212ENST00000468164 HDAC9Q9UKV0 1011 aa16.94■□□□□ 0.3
C9orf3-212ENST00000468164 PAPPA2Q9BXP8 1791 aa16.94■□□□□ 0.3
C9orf3-212ENST00000468164 ARAP2Q8WZ64 1704 aa16.93■□□□□ 0.3
C9orf3-212ENST00000468164 F8W031 263 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-212ENST00000468164 ZIC5Q96T25 663 aa16.93■□□□□ 0.3
C9orf3-212ENST00000468164 BICC1Q9H694 974 aaKnown RBP16.93■□□□□ 0.3
C9orf3-212ENST00000468164 SMC4Q9NTJ3 1288 aa16.93■□□□□ 0.3
C9orf3-212ENST00000468164 PTPRCP08575 1304 aa16.93■□□□□ 0.3
C9orf3-212ENST00000468164 WNT10BO00744 389 aa16.92■□□□□ 0.3
C9orf3-212ENST00000468164 NOGQ13253 232 aa16.92■□□□□ 0.3
C9orf3-212ENST00000468164 TTLL12Q14166 644 aaPredicted RBP16.92■□□□□ 0.3
C9orf3-212ENST00000468164 KAZALD1Q96I82 304 aa16.92■□□□□ 0.3
C9orf3-212ENST00000468164 PUS3Q9BZE2 481 aaKnown RBP16.92■□□□□ 0.3
C9orf3-212ENST00000468164 PITPNM2Q9BZ72 1349 aa16.92■□□□□ 0.3
C9orf3-212ENST00000468164 BRPF1P55201 1214 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-212ENST00000468164 MOB2Q70IA6 237 aa16.9■□□□□ 0.3
C9orf3-212ENST00000468164 IRS2Q9Y4H2 1338 aa16.9■□□□□ 0.3
C9orf3-212ENST00000468164 GYG1P46976 350 aa16.89■□□□□ 0.29
C9orf3-212ENST00000468164 PRKG1Q13976 671 aa16.89■□□□□ 0.29
C9orf3-212ENST00000468164 DLGAP5Q15398 846 aa16.89■□□□□ 0.29
C9orf3-212ENST00000468164 C15orf52Q6ZUT6 534 aaKnown RBP16.89■□□□□ 0.29
C9orf3-212ENST00000468164 CERS5Q8N5B7 392 aa16.89■□□□□ 0.29
C9orf3-212ENST00000468164 CCDC102AQ96A19 550 aa16.89■□□□□ 0.29
C9orf3-212ENST00000468164 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms