RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 GPSM2P81274 684 aa8.41□□□□□ -1.06
SCAF4-204ENST00000467731 TSHZ3Q63HK5 1081 aa8.41□□□□□ -1.06
SCAF4-204ENST00000467731 PLEKHM2Q8IWE5 1019 aa8.41□□□□□ -1.06
SCAF4-204ENST00000467731 LPIN2Q92539 896 aa8.41□□□□□ -1.06
SCAF4-204ENST00000467731 C21orf2O43822 256 aa8.41□□□□□ -1.06
SCAF4-204ENST00000467731 MX1P20591 662 aa8.41□□□□□ -1.06
SCAF4-204ENST00000467731 ADORA1P30542 326 aa8.41□□□□□ -1.06
SCAF4-204ENST00000467731 C7orf43Q8WVR3 580 aa8.41□□□□□ -1.06
SCAF4-204ENST00000467731 DBNDD2Q9BQY9 259 aa8.41□□□□□ -1.06
SCAF4-204ENST00000467731 ARFGEF1Q9Y6D6 1849 aa8.41□□□□□ -1.06
SCAF4-204ENST00000467731 DUOX1Q9NRD9 1551 aa8.41□□□□□ -1.06
SCAF4-204ENST00000467731 KCNJ4P48050 445 aa8.4□□□□□ -1.06
SCAF4-204ENST00000467731 UBE4AQ14139 1066 aa8.4□□□□□ -1.06
SCAF4-204ENST00000467731 XAGE2Q96GT9 111 aa8.4□□□□□ -1.06
SCAF4-204ENST00000467731 SYT17Q9BSW7 474 aa8.4□□□□□ -1.06
SCAF4-204ENST00000467731 TMX4Q9H1E5 349 aaPredicted RBP8.4□□□□□ -1.06
SCAF4-204ENST00000467731 ZNF804BA4D1E1 1349 aa8.4□□□□□ -1.06
SCAF4-204ENST00000467731 PDE1AP54750 535 aa8.4□□□□□ -1.06
SCAF4-204ENST00000467731 DALRD3Q5D0E6 543 aaKnown RBP8.4□□□□□ -1.06
SCAF4-204ENST00000467731 MYH13Q9UKX3 1938 aa8.4□□□□□ -1.06
SCAF4-204ENST00000467731 SNED1Q8TER0 1413 aa8.4□□□□□ -1.07
SCAF4-204ENST00000467731 UFL1O94874 794 aa8.4□□□□□ -1.07
SCAF4-204ENST00000467731 IFIT1P09914 478 aaKnown RBP8.4□□□□□ -1.07
SCAF4-204ENST00000467731 SLC5A1P13866 664 aa8.4□□□□□ -1.07
SCAF4-204ENST00000467731 KLRK1P26718 216 aa8.4□□□□□ -1.07
SCAF4-204ENST00000467731 MPNDQ8N594 471 aa8.4□□□□□ -1.07
SCAF4-204ENST00000467731 GPR101Q96P66 508 aaPredicted RBP8.4□□□□□ -1.07
SCAF4-204ENST00000467731 POLLQ9UGP5 575 aa8.4□□□□□ -1.07
SCAF4-204ENST00000467731 GGA1Q9UJY5 639 aa8.4□□□□□ -1.07
SCAF4-204ENST00000467731 BCS1LQ9Y276 419 aa8.4□□□□□ -1.07
SCAF4-204ENST00000467731 LEMD3Q9Y2U8 911 aa8.4□□□□□ -1.07
SCAF4-204ENST00000467731 AKAP11Q9UKA4 1901 aa8.39□□□□□ -1.07
SCAF4-204ENST00000467731 FER1L6Q2WGJ9 1857 aa8.39□□□□□ -1.07
SCAF4-204ENST00000467731 DPP8Q6V1X1 898 aaPredicted RBP8.39□□□□□ -1.07
SCAF4-204ENST00000467731 TBC1D16Q8TBP0 767 aa8.39□□□□□ -1.07
SCAF4-204ENST00000467731 AK9Q5TCS8 1911 aa8.39□□□□□ -1.07
SCAF4-204ENST00000467731 GORABQ5T7V8 394 aa8.39□□□□□ -1.07
SCAF4-204ENST00000467731 TXNRD3Q86VQ6 643 aa8.39□□□□□ -1.07
SCAF4-204ENST00000467731 GPATCH3Q96I76 525 aa8.39□□□□□ -1.07
SCAF4-204ENST00000467731 OSBPL3Q9H4L5 887 aa8.39□□□□□ -1.07
SCAF4-204ENST00000467731 ECHDC1Q9NTX5 307 aa8.39□□□□□ -1.07
SCAF4-204ENST00000467731 TTC41PQ6P2S7 1318 aa8.38□□□□□ -1.07
SCAF4-204ENST00000467731 C6orf229H3BNL8 230 aa8.38□□□□□ -1.07
SCAF4-204ENST00000467731 TULP1O00294 542 aaPredicted RBP8.38□□□□□ -1.07
SCAF4-204ENST00000467731 ATP2B4P23634 1241 aa8.38□□□□□ -1.07
SCAF4-204ENST00000467731 GYG1P46976 350 aa8.38□□□□□ -1.07
SCAF4-204ENST00000467731 BCAMP50895 628 aa8.38□□□□□ -1.07
SCAF4-204ENST00000467731 PI4K2BQ8TCG2 481 aa8.38□□□□□ -1.07
SCAF4-204ENST00000467731 STAP2Q9UGK3 403 aa8.38□□□□□ -1.07
SCAF4-204ENST00000467731 IRS2Q9Y4H2 1338 aa8.38□□□□□ -1.07
SCAF4-204ENST00000467731 CHD4Q14839 1912 aa8.38□□□□□ -1.07
SCAF4-204ENST00000467731 PHKA1P46020 1223 aa8.38□□□□□ -1.07
SCAF4-204ENST00000467731 CCDC93Q567U6 631 aa8.38□□□□□ -1.07
SCAF4-204ENST00000467731 CCDC158Q5M9N0 1113 aa8.38□□□□□ -1.07
SCAF4-204ENST00000467731 CCDC102BQ68D86 513 aa8.38□□□□□ -1.07
SCAF4-204ENST00000467731 CC2D2BQ6DHV5 1058 aa8.38□□□□□ -1.07
SCAF4-204ENST00000467731 TTC39AQ5SRH9 613 aa8.37□□□□□ -1.07
SCAF4-204ENST00000467731 FAM84BQ96KN1 310 aaPredicted RBP8.37□□□□□ -1.07
SCAF4-204ENST00000467731 CCDC88AQ3V6T2 1871 aa8.37□□□□□ -1.07
SCAF4-204ENST00000467731 MYO5AQ9Y4I1 1855 aaKnown RBP8.37□□□□□ -1.07
SCAF4-204ENST00000467731 ERC2O15083 957 aa8.37□□□□□ -1.07
SCAF4-204ENST00000467731 GSPT1P15170 499 aaKnown RBP8.37□□□□□ -1.07
SCAF4-204ENST00000467731 CAVIN4Q5BKX8 364 aa8.37□□□□□ -1.07
SCAF4-204ENST00000467731 VPS37DQ86XT2 251 aa8.37□□□□□ -1.07
SCAF4-204ENST00000467731 BOLA2Q9H3K6 86 aa8.37□□□□□ -1.07
SCAF4-204ENST00000467731 MED23Q9ULK4 1368 aa8.37□□□□□ -1.07
SCAF4-204ENST00000467731 AOX1Q06278 1338 aa8.37□□□□□ -1.07
SCAF4-204ENST00000467731 GLRX3O76003 335 aaKnown RBP8.37□□□□□ -1.07
SCAF4-204ENST00000467731 ATP5JP18859 108 aa8.37□□□□□ -1.07
SCAF4-204ENST00000467731 WASHC4Q2M389 1173 aa8.37□□□□□ -1.07
SCAF4-204ENST00000467731 TTC22Q5TAA0 569 aa8.37□□□□□ -1.07
SCAF4-204ENST00000467731 SOGA3Q5TF21 947 aa8.37□□□□□ -1.07
SCAF4-204ENST00000467731 RTKN2Q8IZC4 609 aa8.37□□□□□ -1.07
SCAF4-204ENST00000467731 RTFDC1Q9BY42 306 aaPredicted RBP8.37□□□□□ -1.07
SCAF4-204ENST00000467731 IQSEC3Q9UPP2 1182 aaPredicted RBP8.37□□□□□ -1.07
SCAF4-204ENST00000467731 NDUFB9Q9Y6M9 179 aa8.37□□□□□ -1.07
SCAF4-204ENST00000467731 RIMBP2O15034 1052 aa8.36□□□□□ -1.07
SCAF4-204ENST00000467731 MAP4K4O95819 1239 aaPredicted RBP8.36□□□□□ -1.07
SCAF4-204ENST00000467731 ARID4AP29374 1257 aaPredicted RBP8.36□□□□□ -1.07
SCAF4-204ENST00000467731 MCAMP43121 646 aa8.36□□□□□ -1.07
SCAF4-204ENST00000467731 SCARF1Q14162 830 aa8.36□□□□□ -1.07
SCAF4-204ENST00000467731 GRIPAP1Q4V328 841 aa8.36□□□□□ -1.07
SCAF4-204ENST00000467731 PI16Q6UXB8 463 aa8.36□□□□□ -1.07
SCAF4-204ENST00000467731 C15orf52Q6ZUT6 534 aaKnown RBP8.36□□□□□ -1.07
SCAF4-204ENST00000467731 FBXO33Q7Z6M2 555 aa8.36□□□□□ -1.07
SCAF4-204ENST00000467731 HIBADHP31937 336 aaKnown RBP8.36□□□□□ -1.07
SCAF4-204ENST00000467731 RASGRF1Q13972 1273 aa8.36□□□□□ -1.07
SCAF4-204ENST00000467731 PSMD1Q99460 953 aa8.36□□□□□ -1.07
SCAF4-204ENST00000467731 ZC3H12CQ9C0D7 883 aaKnown RBP8.36□□□□□ -1.07
SCAF4-204ENST00000467731 ZNF804AQ7Z570 1209 aa8.35□□□□□ -1.07
SCAF4-204ENST00000467731 ZNF512BQ96KM6 892 aaPredicted RBP8.35□□□□□ -1.07
SCAF4-204ENST00000467731 EYA3Q99504 573 aa8.35□□□□□ -1.07
SCAF4-204ENST00000467731 DNAJC2Q99543 621 aaKnown RBP8.35□□□□□ -1.07
SCAF4-204ENST00000467731 SCN9AQ15858 1988 aa8.35□□□□□ -1.07
SCAF4-204ENST00000467731 NFKBIEO00221 500 aa8.35□□□□□ -1.07
SCAF4-204ENST00000467731 BRD2P25440 801 aaKnown RBP8.35□□□□□ -1.07
SCAF4-204ENST00000467731 AOC3Q16853 763 aa8.35□□□□□ -1.07
SCAF4-204ENST00000467731 BMP2KLQ5H9B9 411 aa8.35□□□□□ -1.07
SCAF4-204ENST00000467731 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.35□□□□□ -1.07
SCAF4-204ENST00000467731 EDC3Q96F86 508 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms