RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 SSH3Q8TE77 659 aa16.94■□□□□ 0.3
SSBP1-206ENST00000467681 COA1Q9GZY4 146 aa16.94■□□□□ 0.3
SSBP1-206ENST00000467681 GJA3Q9Y6H8 435 aa16.94■□□□□ 0.3
SSBP1-206ENST00000467681 IRS2Q9Y4H2 1338 aa16.94■□□□□ 0.3
SSBP1-206ENST00000467681 IL15P40933 162 aaPredicted RBP16.93■□□□□ 0.3
SSBP1-206ENST00000467681 SIL1Q9H173 461 aa16.93■□□□□ 0.3
SSBP1-206ENST00000467681 CEP126Q9P2H0 1117 aa16.93■□□□□ 0.3
SSBP1-206ENST00000467681 LTBP1Q14766 1721 aa16.93■□□□□ 0.3
SSBP1-206ENST00000467681 CEP85Q6P2H3 762 aa16.92■□□□□ 0.3
SSBP1-206ENST00000467681 PSMD14O00487 310 aa16.91■□□□□ 0.3
SSBP1-206ENST00000467681 VIL1P09327 827 aaKnown RBP16.91■□□□□ 0.3
SSBP1-206ENST00000467681 FGFR2P21802 821 aa16.91■□□□□ 0.3
SSBP1-206ENST00000467681 G3BP1Q13283 466 aaKnown RBP eCLIP16.91■□□□□ 0.3
SSBP1-206ENST00000467681 RPAP2Q8IXW5 612 aaPredicted RBP16.91■□□□□ 0.3
SSBP1-206ENST00000467681 FAM84BQ96KN1 310 aaPredicted RBP16.91■□□□□ 0.3
SSBP1-206ENST00000467681 CD209Q9NNX6 404 aa16.91■□□□□ 0.3
SSBP1-206ENST00000467681 IQCA1LA6NCM1 817 aa16.9■□□□□ 0.3
SSBP1-206ENST00000467681 PUM3Q15397 648 aaKnown RBP16.9■□□□□ 0.3
SSBP1-206ENST00000467681 FBXO33Q7Z6M2 555 aa16.9■□□□□ 0.3
SSBP1-206ENST00000467681 NOP58Q9Y2X3 529 aaKnown RBP16.9■□□□□ 0.3
SSBP1-206ENST00000467681 USP17L3A6NCW0 530 aa16.89■□□□□ 0.29
SSBP1-206ENST00000467681 USP17L4A6NCW7 530 aa16.89■□□□□ 0.29
SSBP1-206ENST00000467681 HIBADHP31937 336 aaKnown RBP16.89■□□□□ 0.29
SSBP1-206ENST00000467681 GMPSP49915 693 aaPredicted RBP16.89■□□□□ 0.29
SSBP1-206ENST00000467681 USP17L1Q7RTZ2 530 aa16.89■□□□□ 0.29
SSBP1-206ENST00000467681 ZNF804AQ7Z570 1209 aa16.89■□□□□ 0.29
SSBP1-206ENST00000467681 DPF2Q92785 391 aa16.89■□□□□ 0.29
SSBP1-206ENST00000467681 TAF1DQ9H5J8 278 aaPredicted RBP16.89■□□□□ 0.29
SSBP1-206ENST00000467681 HACL1Q9UJ83 578 aa16.89■□□□□ 0.29
SSBP1-206ENST00000467681 SURF6O75683 361 aaKnown RBP16.88■□□□□ 0.29
SSBP1-206ENST00000467681 IFIT1P09914 478 aaKnown RBP16.88■□□□□ 0.29
SSBP1-206ENST00000467681 IL1R1P14778 569 aa16.88■□□□□ 0.29
SSBP1-206ENST00000467681 EPS15P42566 896 aa16.88■□□□□ 0.29
SSBP1-206ENST00000467681 GYG1P46976 350 aa16.88■□□□□ 0.29
SSBP1-206ENST00000467681 SCNN1DP51172 638 aa16.88■□□□□ 0.29
SSBP1-206ENST00000467681 STRIP1Q5VSL9 837 aa16.88■□□□□ 0.29
SSBP1-206ENST00000467681 LPIN2Q92539 896 aa16.88■□□□□ 0.29
SSBP1-206ENST00000467681 GPRC5DQ9NZD1 345 aa16.88■□□□□ 0.29
SSBP1-206ENST00000467681 ZBTB12Q9Y330 459 aaPredicted RBP16.88■□□□□ 0.29
SSBP1-206ENST00000467681 SPEF2Q9C093 1822 aa16.87■□□□□ 0.29
SSBP1-206ENST00000467681 TOMM70O94826 608 aa16.87■□□□□ 0.29
SSBP1-206ENST00000467681 SLC5A1P13866 664 aa16.87■□□□□ 0.29
SSBP1-206ENST00000467681 RPS12P25398 132 aaKnown RBP16.87■□□□□ 0.29
SSBP1-206ENST00000467681 LMOD1P29536 600 aaPredicted RBP16.87■□□□□ 0.29
SSBP1-206ENST00000467681 TFCP2Q12800 502 aa16.87■□□□□ 0.29
SSBP1-206ENST00000467681 TTLL5Q6EMB2 1281 aa16.87■□□□□ 0.29
SSBP1-206ENST00000467681 RSBN1LQ6PCB5 846 aaPredicted RBP16.87■□□□□ 0.29
SSBP1-206ENST00000467681 SIRT2Q8IXJ6 389 aa16.87■□□□□ 0.29
SSBP1-206ENST00000467681 C16orf71Q8IYS4 520 aaPredicted RBP16.87■□□□□ 0.29
SSBP1-206ENST00000467681 TDRD7Q8NHU6 1098 aaKnown RBP16.87■□□□□ 0.29
SSBP1-206ENST00000467681 CNOT7Q9UIV1 285 aaKnown RBP16.87■□□□□ 0.29
SSBP1-206ENST00000467681 SUPT16HQ9Y5B9 1047 aaKnown RBP16.87■□□□□ 0.29
SSBP1-206ENST00000467681 SASH1O94885 1247 aa16.86■□□□□ 0.29
SSBP1-206ENST00000467681 EPHX2P34913 555 aa16.86■□□□□ 0.29
SSBP1-206ENST00000467681 BCAMP50895 628 aa16.86■□□□□ 0.29
SSBP1-206ENST00000467681 ATP2B3Q16720 1220 aa16.86■□□□□ 0.29
SSBP1-206ENST00000467681 CAVIN4Q5BKX8 364 aa16.86■□□□□ 0.29
SSBP1-206ENST00000467681 DACT2Q5SW24 774 aa16.86■□□□□ 0.29
SSBP1-206ENST00000467681 AGBL3Q8NEM8 1001 aa16.86■□□□□ 0.29
SSBP1-206ENST00000467681 GMLQ99445 158 aa16.86■□□□□ 0.29
SSBP1-206ENST00000467681 AKAP2Q9Y2D5 859 aa16.86■□□□□ 0.29
SSBP1-206ENST00000467681 TIAM2Q8IVF5 1701 aa16.85■□□□□ 0.29
SSBP1-206ENST00000467681 H7C1D1 291 aa16.85■□□□□ 0.29
SSBP1-206ENST00000467681 HMMRO75330 724 aa16.85■□□□□ 0.29
SSBP1-206ENST00000467681 TIMM10P62072 90 aa16.85■□□□□ 0.29
SSBP1-206ENST00000467681 GTF2IP78347 998 aa16.85■□□□□ 0.29
SSBP1-206ENST00000467681 VPS37DQ86XT2 251 aa16.85■□□□□ 0.29
SSBP1-206ENST00000467681 RBM46Q8TBY0 533 aaKnown RBP16.85■□□□□ 0.29
SSBP1-206ENST00000467681 WDR90Q96KV7 1748 aa16.84■□□□□ 0.29
SSBP1-206ENST00000467681 OS9Q13438 667 aaPredicted RBP16.84■□□□□ 0.29
SSBP1-206ENST00000467681 PNMA8AQ86V59 439 aaPredicted RBP16.84■□□□□ 0.29
SSBP1-206ENST00000467681 CRBNQ96SW2 442 aa16.84■□□□□ 0.29
SSBP1-206ENST00000467681 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.84■□□□□ 0.29
SSBP1-206ENST00000467681 SCN9AQ15858 1988 aa16.83■□□□□ 0.28
SSBP1-206ENST00000467681 FAM205AQ6ZU69 1335 aa16.83■□□□□ 0.28
SSBP1-206ENST00000467681 MICALL2Q8IY33 904 aa16.83■□□□□ 0.28
SSBP1-206ENST00000467681 MXD3Q9BW11 206 aa16.83■□□□□ 0.28
SSBP1-206ENST00000467681 GPR108Q9NPR9 543 aa16.83■□□□□ 0.28
SSBP1-206ENST00000467681 ADARB2Q9NS39 739 aaKnown RBP16.83■□□□□ 0.28
SSBP1-206ENST00000467681 SHTN1A0MZ66 631 aa16.82■□□□□ 0.28
SSBP1-206ENST00000467681 USP17L8P0C7I0 530 aa16.82■□□□□ 0.28
SSBP1-206ENST00000467681 C1QTNF8P60827 252 aa16.82■□□□□ 0.28
SSBP1-206ENST00000467681 HSP90AB4PQ58FF6 505 aa16.82■□□□□ 0.28
SSBP1-206ENST00000467681 USP50Q70EL3 339 aaPredicted RBP16.82■□□□□ 0.28
SSBP1-206ENST00000467681 FBXW7Q969H0 707 aa16.82■□□□□ 0.28
SSBP1-206ENST00000467681 A0A1B0GUL7 405 aa16.81■□□□□ 0.28
SSBP1-206ENST00000467681 ZBTB22O15209 634 aa16.81■□□□□ 0.28
SSBP1-206ENST00000467681 ADORA1P30542 326 aa16.81■□□□□ 0.28
SSBP1-206ENST00000467681 MMP14P50281 582 aa16.81■□□□□ 0.28
SSBP1-206ENST00000467681 ZNF280AP59817 542 aaPredicted RBP16.81■□□□□ 0.28
SSBP1-206ENST00000467681 FKBP1AP62942 108 aaKnown RBP16.81■□□□□ 0.28
SSBP1-206ENST00000467681 EAPPQ56P03 285 aaPredicted RBP16.81■□□□□ 0.28
SSBP1-206ENST00000467681 LDHDQ86WU2 507 aa16.81■□□□□ 0.28
SSBP1-206ENST00000467681 SMC1BQ8NDV3 1235 aa16.81■□□□□ 0.28
SSBP1-206ENST00000467681 XAGE2Q96GT9 111 aa16.81■□□□□ 0.28
SSBP1-206ENST00000467681 NEUROD6Q96NK8 337 aa16.81■□□□□ 0.28
SSBP1-206ENST00000467681 GNL3LQ9NVN8 582 aaKnown RBP16.81■□□□□ 0.28
SSBP1-206ENST00000467681 EXOC6BQ9Y2D4 811 aa16.81■□□□□ 0.28
SSBP1-206ENST00000467681 PCDHB15Q9Y5E8 787 aa16.81■□□□□ 0.28
SSBP1-206ENST00000467681 MYO3BQ8WXR4 1341 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms