RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 MINPP1Q9UNW1 487 aa17.81■□□□□ 0.44
CCHCR1-211ENST00000467553 LEMD3Q9Y2U8 911 aa17.81■□□□□ 0.44
CCHCR1-211ENST00000467553 USP17L3A6NCW0 530 aa17.8■□□□□ 0.44
CCHCR1-211ENST00000467553 USP17L4A6NCW7 530 aa17.8■□□□□ 0.44
CCHCR1-211ENST00000467553 IGHMBP2P38935 993 aaKnown RBP17.8■□□□□ 0.44
CCHCR1-211ENST00000467553 GRM1Q13255 1194 aa17.8■□□□□ 0.44
CCHCR1-211ENST00000467553 USP17L1Q7RTZ2 530 aa17.8■□□□□ 0.44
CCHCR1-211ENST00000467553 SULF1Q8IWU6 871 aa17.8■□□□□ 0.44
CCHCR1-211ENST00000467553 SMC4Q9NTJ3 1288 aa17.8■□□□□ 0.44
CCHCR1-211ENST00000467553 PITPNM2Q9BZ72 1349 aa17.79■□□□□ 0.44
CCHCR1-211ENST00000467553 HUNKP57058 714 aa17.79■□□□□ 0.44
CCHCR1-211ENST00000467553 ALDH1L2Q3SY69 923 aa17.79■□□□□ 0.44
CCHCR1-211ENST00000467553 CCDC102AQ96A19 550 aa17.79■□□□□ 0.44
CCHCR1-211ENST00000467553 ANKRD2Q9GZV1 360 aa17.79■□□□□ 0.44
CCHCR1-211ENST00000467553 GREM2Q9H772 168 aa17.79■□□□□ 0.44
CCHCR1-211ENST00000467553 GBA2Q9HCG7 927 aaPredicted RBP17.79■□□□□ 0.44
CCHCR1-211ENST00000467553 MYO3BQ8WXR4 1341 aa17.78■□□□□ 0.44
CCHCR1-211ENST00000467553 AOC2O75106 756 aa17.78■□□□□ 0.44
CCHCR1-211ENST00000467553 CSF1RP07333 972 aa17.78■□□□□ 0.44
CCHCR1-211ENST00000467553 USP17L8P0C7I0 530 aa17.78■□□□□ 0.44
CCHCR1-211ENST00000467553 CCT4P50991 539 aaKnown RBP17.78■□□□□ 0.44
CCHCR1-211ENST00000467553 RBM26Q5T8P6 1007 aaKnown RBP17.78■□□□□ 0.44
CCHCR1-211ENST00000467553 GMLQ99445 158 aa17.78■□□□□ 0.44
CCHCR1-211ENST00000467553 SRCIN1Q9C0H9 1055 aa17.78■□□□□ 0.44
CCHCR1-211ENST00000467553 COA1Q9GZY4 146 aa17.78■□□□□ 0.44
CCHCR1-211ENST00000467553 EGFRP00533 1210 aa17.77■□□□□ 0.44
CCHCR1-211ENST00000467553 CT47B1P0C2W7 299 aaPredicted RBP17.77■□□□□ 0.44
CCHCR1-211ENST00000467553 CASP7P55210 303 aa17.77■□□□□ 0.44
CCHCR1-211ENST00000467553 RGMBQ6NW40 437 aa17.77■□□□□ 0.44
CCHCR1-211ENST00000467553 REM2Q8IYK8 340 aaPredicted RBP17.77■□□□□ 0.44
CCHCR1-211ENST00000467553 MPHOSPH8Q99549 860 aa17.77■□□□□ 0.44
CCHCR1-211ENST00000467553 C9orf78Q9NZ63 289 aaPredicted RBP17.77■□□□□ 0.44
CCHCR1-211ENST00000467553 PTPRCP08575 1304 aa17.76■□□□□ 0.43
CCHCR1-211ENST00000467553 ALDH1L1O75891 902 aa17.76■□□□□ 0.43
CCHCR1-211ENST00000467553 FKBP1BP68106 108 aa17.76■□□□□ 0.43
CCHCR1-211ENST00000467553 STRIP1Q5VSL9 837 aa17.76■□□□□ 0.43
CCHCR1-211ENST00000467553 MYOZ2Q9NPC6 264 aa17.76■□□□□ 0.43
CCHCR1-211ENST00000467553 GGA3Q9NZ52 723 aa17.76■□□□□ 0.43
CCHCR1-211ENST00000467553 ITGA6P23229 1130 aa17.75■□□□□ 0.43
CCHCR1-211ENST00000467553 SCARF1Q14162 830 aa17.75■□□□□ 0.43
CCHCR1-211ENST00000467553 OGFOD1Q8N543 542 aa17.75■□□□□ 0.43
CCHCR1-211ENST00000467553 SPEF2Q9C093 1822 aa17.75■□□□□ 0.43
CCHCR1-211ENST00000467553 GRM8O00222 908 aa17.74■□□□□ 0.43
CCHCR1-211ENST00000467553 SAGE1Q9NXZ1 904 aa17.74■□□□□ 0.43
CCHCR1-211ENST00000467553 NOB1Q9ULX3 412 aaKnown RBP17.74■□□□□ 0.43
CCHCR1-211ENST00000467553 ANKRD18BA2A2Z9 1011 aa17.73■□□□□ 0.43
CCHCR1-211ENST00000467553 ADM5C9JUS6 153 aa17.73■□□□□ 0.43
CCHCR1-211ENST00000467553 RARSP54136 660 aaKnown RBP17.73■□□□□ 0.43
CCHCR1-211ENST00000467553 DACT2Q5SW24 774 aa17.73■□□□□ 0.43
CCHCR1-211ENST00000467553 ANGEL2Q5VTE6 544 aaKnown RBP17.73■□□□□ 0.43
CCHCR1-211ENST00000467553 CHMP3Q9Y3E7 222 aa17.73■□□□□ 0.43
CCHCR1-211ENST00000467553 ZNF804BA4D1E1 1349 aa17.72■□□□□ 0.43
CCHCR1-211ENST00000467553 ZNF157P51786 506 aaPredicted RBP17.72■□□□□ 0.43
CCHCR1-211ENST00000467553 FOXO4P98177 505 aa17.72■□□□□ 0.43
CCHCR1-211ENST00000467553 CDCA5Q96FF9 252 aa17.72■□□□□ 0.43
CCHCR1-211ENST00000467553 ABHD8Q96I13 439 aa17.72■□□□□ 0.43
CCHCR1-211ENST00000467553 FAM155AB1AL88 458 aaPredicted RBP17.71■□□□□ 0.43
CCHCR1-211ENST00000467553 FAM161AQ3B820 660 aa17.71■□□□□ 0.43
CCHCR1-211ENST00000467553 C15orf52Q6ZUT6 534 aaKnown RBP17.71■□□□□ 0.43
CCHCR1-211ENST00000467553 HDAC9Q9UKV0 1011 aa17.71■□□□□ 0.43
CCHCR1-211ENST00000467553 KCNJ4P48050 445 aa17.7■□□□□ 0.42
CCHCR1-211ENST00000467553 IFIT5Q13325 482 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-211ENST00000467553 EPHA10Q5JZY3 1008 aa17.7■□□□□ 0.42
CCHCR1-211ENST00000467553 TTLL5Q6EMB2 1281 aa17.7■□□□□ 0.42
CCHCR1-211ENST00000467553 LMBR1LQ6UX01 489 aa17.7■□□□□ 0.42
CCHCR1-211ENST00000467553 PAPPA2Q9BXP8 1791 aa17.69■□□□□ 0.42
CCHCR1-211ENST00000467553 AKAP11Q9UKA4 1901 aa17.69■□□□□ 0.42
CCHCR1-211ENST00000467553 SLC10A3P09131 477 aa17.69■□□□□ 0.42
CCHCR1-211ENST00000467553 NBPF7P0C2Y1 421 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-211ENST00000467553 CHRNDQ07001 517 aa17.69■□□□□ 0.42
CCHCR1-211ENST00000467553 ZNF646O15015 1829 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-211ENST00000467553 ZBED9Q6R2W3 1325 aa17.69■□□□□ 0.42
CCHCR1-211ENST00000467553 BCAR3O75815 825 aa17.68■□□□□ 0.42
CCHCR1-211ENST00000467553 NF2P35240 595 aa17.68■□□□□ 0.42
CCHCR1-211ENST00000467553 DLK2Q6UY11 383 aa17.68■□□□□ 0.42
CCHCR1-211ENST00000467553 SUCLG2Q96I99 432 aa17.68■□□□□ 0.42
CCHCR1-211ENST00000467553 API5Q9BZZ5 524 aaKnown RBP17.68■□□□□ 0.42
CCHCR1-211ENST00000467553 WTIPA6NIX2 430 aaPredicted RBP17.67■□□□□ 0.42
CCHCR1-211ENST00000467553 WNT10BO00744 389 aa17.67■□□□□ 0.42
CCHCR1-211ENST00000467553 KIF23Q02241 960 aaPredicted RBP17.67■□□□□ 0.42
CCHCR1-211ENST00000467553 CCDC57Q2TAC2 916 aa17.67■□□□□ 0.42
CCHCR1-211ENST00000467553 TXNRD3Q86VQ6 643 aa17.67■□□□□ 0.42
CCHCR1-211ENST00000467553 FRAT1Q92837 279 aaPredicted RBP17.67■□□□□ 0.42
CCHCR1-211ENST00000467553 CD209Q9NNX6 404 aa17.67■□□□□ 0.42
CCHCR1-211ENST00000467553 ASTN2O75129 1339 aaPredicted RBP17.67■□□□□ 0.42
CCHCR1-211ENST00000467553 CASP8AP2Q9UKL3 1982 aa17.66■□□□□ 0.42
CCHCR1-211ENST00000467553 FKBP1AP62942 108 aaKnown RBP17.66■□□□□ 0.42
CCHCR1-211ENST00000467553 TAF7LQ5H9L4 462 aa17.66■□□□□ 0.42
CCHCR1-211ENST00000467553 APOBEC3FQ8IUX4 373 aaKnown RBP17.66■□□□□ 0.42
CCHCR1-211ENST00000467553 FBXW7Q969H0 707 aa17.66■□□□□ 0.42
CCHCR1-211ENST00000467553 USP44Q9H0E7 712 aa17.66■□□□□ 0.42
CCHCR1-211ENST00000467553 TSKSQ9UJT2 592 aa17.66■□□□□ 0.42
CCHCR1-211ENST00000467553 NBPF9Q3BBW0 867 aa17.65■□□□□ 0.42
CCHCR1-211ENST00000467553 MTMR14Q8NCE2 650 aa17.65■□□□□ 0.42
CCHCR1-211ENST00000467553 KAZALD1Q96I82 304 aa17.65■□□□□ 0.42
CCHCR1-211ENST00000467553 ZNF594Q96JF6 807 aaPredicted RBP17.65■□□□□ 0.42
CCHCR1-211ENST00000467553 ZIC5Q96T25 663 aa17.65■□□□□ 0.42
CCHCR1-211ENST00000467553 UTYO14607 1347 aa17.65■□□□□ 0.42
CCHCR1-211ENST00000467553 COL1A1P02452 1464 aaPredicted RBP17.64■□□□□ 0.41
CCHCR1-211ENST00000467553 IPO8O15397 1037 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms