RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 ZBTB9Q96C00 473 aa21.09■□□□□ 0.97
SNAPC3-205ENST00000467062 PLBD2Q8NHP8 589 aa21.09■□□□□ 0.97
SNAPC3-205ENST00000467062 SIPA1L3O60292 1781 aaPredicted RBP21.09■□□□□ 0.97
SNAPC3-205ENST00000467062 HIP1O00291 1037 aa21.08■□□□□ 0.97
SNAPC3-205ENST00000467062 ZNF75DP51815 510 aa21.08■□□□□ 0.97
SNAPC3-205ENST00000467062 CASP7P55210 303 aa21.08■□□□□ 0.97
SNAPC3-205ENST00000467062 LARP1BQ659C4 914 aaKnown RBP21.08■□□□□ 0.97
SNAPC3-205ENST00000467062 ZCRB1Q8TBF4 217 aaKnown RBP21.08■□□□□ 0.97
SNAPC3-205ENST00000467062 TRIM5Q9C035 493 aa21.08■□□□□ 0.97
SNAPC3-205ENST00000467062 PPFIA3O75145 1194 aa21.08■□□□□ 0.96
SNAPC3-205ENST00000467062 H2AFXP16104 143 aaPredicted RBP21.08■□□□□ 0.96
SNAPC3-205ENST00000467062 BRINP3Q76B58 766 aa21.08■□□□□ 0.96
SNAPC3-205ENST00000467062 GTF3C6Q969F1 213 aa21.08■□□□□ 0.96
SNAPC3-205ENST00000467062 CWC15Q9P013 229 aaKnown RBP21.08■□□□□ 0.96
SNAPC3-205ENST00000467062 NRBP1Q9UHY1 535 aa21.08■□□□□ 0.96
SNAPC3-205ENST00000467062 NEMFO60524 1076 aa21.07■□□□□ 0.96
SNAPC3-205ENST00000467062 ATP5JP18859 108 aa21.07■□□□□ 0.96
SNAPC3-205ENST00000467062 BRD2P25440 801 aaKnown RBP21.07■□□□□ 0.96
SNAPC3-205ENST00000467062 CASQ1P31415 396 aa21.07■□□□□ 0.96
SNAPC3-205ENST00000467062 GPS2Q13227 327 aa21.07■□□□□ 0.96
SNAPC3-205ENST00000467062 RABL6Q3YEC7 729 aaPredicted RBP21.07■□□□□ 0.96
SNAPC3-205ENST00000467062 PLA2G4DQ86XP0 818 aa21.07■□□□□ 0.96
SNAPC3-205ENST00000467062 FHOD1Q9Y613 1164 aa21.07■□□□□ 0.96
SNAPC3-205ENST00000467062 FOXO4P98177 505 aa21.07■□□□□ 0.96
SNAPC3-205ENST00000467062 TOB2Q14106 344 aaPredicted RBP21.07■□□□□ 0.96
SNAPC3-205ENST00000467062 LRRC24Q50LG9 513 aa21.07■□□□□ 0.96
SNAPC3-205ENST00000467062 CDC37L1Q7L3B6 337 aa21.07■□□□□ 0.96
SNAPC3-205ENST00000467062 TNS3Q68CZ2 1445 aa21.07■□□□□ 0.96
SNAPC3-205ENST00000467062 CAMTA1Q9Y6Y1 1673 aa21.07■□□□□ 0.96
SNAPC3-205ENST00000467062 NYAP1Q6ZVC0 841 aa21.06■□□□□ 0.96
SNAPC3-205ENST00000467062 ALS2Q96Q42 1657 aa21.06■□□□□ 0.96
SNAPC3-205ENST00000467062 KIF2AO00139 706 aaPredicted RBP21.06■□□□□ 0.96
SNAPC3-205ENST00000467062 CLGNO14967 610 aa21.06■□□□□ 0.96
SNAPC3-205ENST00000467062 ICE2Q659A1 982 aa21.06■□□□□ 0.96
SNAPC3-205ENST00000467062 SYT10Q6XYQ8 523 aa21.06■□□□□ 0.96
SNAPC3-205ENST00000467062 KRBA2Q6ZNG9 492 aa21.06■□□□□ 0.96
SNAPC3-205ENST00000467062 CACTINQ8WUQ7 758 aaKnown RBP21.06■□□□□ 0.96
SNAPC3-205ENST00000467062 ZSCAN31Q96LW9 406 aaPredicted RBP21.06■□□□□ 0.96
SNAPC3-205ENST00000467062 SH2B1Q9NRF2 756 aaPredicted RBP21.06■□□□□ 0.96
SNAPC3-205ENST00000467062 A0A0G2JLW4 131 aa21.05■□□□□ 0.96
SNAPC3-205ENST00000467062 GOLIM4O00461 696 aa21.05■□□□□ 0.96
SNAPC3-205ENST00000467062 RPS6KB1P23443 525 aa21.05■□□□□ 0.96
SNAPC3-205ENST00000467062 PSMA5P28066 241 aa21.05■□□□□ 0.96
SNAPC3-205ENST00000467062 MAP3K11Q16584 847 aa21.05■□□□□ 0.96
SNAPC3-205ENST00000467062 RNF216Q9NWF9 866 aaPredicted RBP21.05■□□□□ 0.96
SNAPC3-205ENST00000467062 MED23Q9ULK4 1368 aa21.05■□□□□ 0.96
SNAPC3-205ENST00000467062 MYO1CO00159 1063 aa21.05■□□□□ 0.96
SNAPC3-205ENST00000467062 LUZP1Q86V48 1076 aa21.05■□□□□ 0.96
SNAPC3-205ENST00000467062 PUS3Q9BZE2 481 aaKnown RBP21.05■□□□□ 0.96
SNAPC3-205ENST00000467062 BRMS1Q9HCU9 246 aa21.05■□□□□ 0.96
SNAPC3-205ENST00000467062 AXDND1Q5T1B0 1012 aaPredicted RBP21.04■□□□□ 0.96
SNAPC3-205ENST00000467062 CLIP2Q9UDT6 1046 aa21.04■□□□□ 0.96
SNAPC3-205ENST00000467062 CRYBG1Q9Y4K1 1723 aa21.04■□□□□ 0.96
SNAPC3-205ENST00000467062 PNMA6AP0CW24 399 aaPredicted RBP21.04■□□□□ 0.96
SNAPC3-205ENST00000467062 TYRO3Q06418 890 aa21.04■□□□□ 0.96
SNAPC3-205ENST00000467062 ATG9AQ7Z3C6 839 aa21.04■□□□□ 0.96
SNAPC3-205ENST00000467062 GOLGA6L1Q8N7Z2 621 aa21.04■□□□□ 0.96
SNAPC3-205ENST00000467062 NEK11Q8NG66 645 aa21.04■□□□□ 0.96
SNAPC3-205ENST00000467062 TFIP11Q9UBB9 837 aaKnown RBP21.04■□□□□ 0.96
SNAPC3-205ENST00000467062 MRVI1Q9Y6F6 885 aa21.04■□□□□ 0.96
SNAPC3-205ENST00000467062 JAK2O60674 1132 aa21.03■□□□□ 0.96
SNAPC3-205ENST00000467062 PSEN1P49768 467 aa21.03■□□□□ 0.96
SNAPC3-205ENST00000467062 C10orf67Q8IYJ2 551 aa21.03■□□□□ 0.96
SNAPC3-205ENST00000467062 CYP21A2P08686 494 aa21.03■□□□□ 0.96
SNAPC3-205ENST00000467062 CDC25BP30305 580 aa21.03■□□□□ 0.96
SNAPC3-205ENST00000467062 PLA2G4AP47712 749 aa21.03■□□□□ 0.96
SNAPC3-205ENST00000467062 SCN11AQ9UI33 1791 aa21.03■□□□□ 0.96
SNAPC3-205ENST00000467062 H7C1W4 665 aa21.02■□□□□ 0.96
SNAPC3-205ENST00000467062 DDX11Q96FC9 970 aa21.02■□□□□ 0.96
SNAPC3-205ENST00000467062 MYCBPQ99417 103 aaPredicted RBP21.02■□□□□ 0.96
SNAPC3-205ENST00000467062 SNRKQ9NRH2 765 aa21.02■□□□□ 0.96
SNAPC3-205ENST00000467062 CWC25Q9NXE8 425 aaPredicted RBP21.02■□□□□ 0.96
SNAPC3-205ENST00000467062 ADAMTS7Q9UKP4 1686 aa21.02■□□□□ 0.96
SNAPC3-205ENST00000467062 ZNF609O15014 1411 aa21.02■□□□□ 0.96
SNAPC3-205ENST00000467062 FOSBP53539 338 aa21.01■□□□□ 0.95
SNAPC3-205ENST00000467062 HAUS7Q99871 368 aa21.01■□□□□ 0.95
SNAPC3-205ENST00000467062 CBX8Q9HC52 389 aa21.01■□□□□ 0.95
SNAPC3-205ENST00000467062 ARGLU1Q9NWB6 273 aaPredicted RBP21.01■□□□□ 0.95
SNAPC3-205ENST00000467062 KIF1AQ12756 1690 aa21.01■□□□□ 0.95
SNAPC3-205ENST00000467062 CLCN6P51797 869 aa21.01■□□□□ 0.95
SNAPC3-205ENST00000467062 LRRC8AQ8IWT6 810 aa21.01■□□□□ 0.95
SNAPC3-205ENST00000467062 NUP62CLQ9H1M0 184 aa21.01■□□□□ 0.95
SNAPC3-205ENST00000467062 ZSCAN26Q16670 478 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 CCDC191Q8NCU4 936 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 TDRD7Q8NHU6 1098 aaKnown RBP21■□□□□ 0.95
SNAPC3-205ENST00000467062 NEK1Q96PY6 1258 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 WDR17Q8IZU2 1322 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 LOC102724159A0A0B4J2E5 919 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 APPP05067 770 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 PWP2Q15269 919 aaKnown RBP21■□□□□ 0.95
SNAPC3-205ENST00000467062 CAMK4Q16566 473 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 MCMDC2Q4G0Z9 681 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 Q6ZUG5 572 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 SYNE4Q8N205 404 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 CHMP4CQ96CF2 233 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 NCAPGQ9BPX3 1015 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 ELP1O95163 1332 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 STRCP1A6NGW2 1772 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 COL18A1P39060 1754 aa21■□□□□ 0.95
SNAPC3-205ENST00000467062 CHST3Q7LGC8 479 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms