RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 NCAPG2Q86XI2 1143 aa8□□□□□ -1.13
LRCH3-212ENST00000466845 CWC22Q9HCG8 908 aaKnown RBP8□□□□□ -1.13
LRCH3-212ENST00000466845 USP21Q9UK80 565 aa8□□□□□ -1.13
LRCH3-212ENST00000466845 H2AFB1P0C5Y9 115 aa7.99□□□□□ -1.13
LRCH3-212ENST00000466845 H2AFB2P0C5Z0 115 aa7.99□□□□□ -1.13
LRCH3-212ENST00000466845 GDF6Q6KF10 455 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-212ENST00000466845 TMED8Q6PL24 325 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-212ENST00000466845 ATCAYQ86WG3 371 aa7.99□□□□□ -1.13
LRCH3-212ENST00000466845 TMEM130Q8N3G9 435 aa7.99□□□□□ -1.13
LRCH3-212ENST00000466845 PBX4Q9BYU1 374 aa7.99□□□□□ -1.13
LRCH3-212ENST00000466845 A0A0U1RQG5 324 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-212ENST00000466845 DLL1O00548 723 aa7.98□□□□□ -1.13
LRCH3-212ENST00000466845 CES1P23141 567 aa7.98□□□□□ -1.13
LRCH3-212ENST00000466845 C8orf34Q49A92 452 aa7.98□□□□□ -1.13
LRCH3-212ENST00000466845 CEP120Q8N960 986 aa7.98□□□□□ -1.13
LRCH3-212ENST00000466845 FOXD4L4Q8WXT5 416 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-212ENST00000466845 MRPL18Q9H0U6 180 aaKnown RBP7.98□□□□□ -1.13
LRCH3-212ENST00000466845 SALL4Q9UJQ4 1053 aa7.98□□□□□ -1.13
LRCH3-212ENST00000466845 MYO15BQ96JP2 1530 aa7.98□□□□□ -1.13
LRCH3-212ENST00000466845 PTPRAP18433 802 aa7.97□□□□□ -1.13
LRCH3-212ENST00000466845 CDC27P30260 824 aa7.97□□□□□ -1.13
LRCH3-212ENST00000466845 NKAPLQ5M9Q1 402 aa7.97□□□□□ -1.13
LRCH3-212ENST00000466845 CEP135Q66GS9 1140 aa7.97□□□□□ -1.13
LRCH3-212ENST00000466845 FAM117BQ6P1L5 589 aa7.97□□□□□ -1.13
LRCH3-212ENST00000466845 TPSG1Q9NRR2 321 aa7.97□□□□□ -1.13
LRCH3-212ENST00000466845 TMEM63CQ9P1W3 806 aa7.97□□□□□ -1.13
LRCH3-212ENST00000466845 EIF4EBP3O60516 100 aaPredicted RBP7.96□□□□□ -1.14
LRCH3-212ENST00000466845 DEAF1O75398 565 aaPredicted RBP7.96□□□□□ -1.14
LRCH3-212ENST00000466845 RSPO4Q2I0M5 234 aaPredicted RBP7.96□□□□□ -1.14
LRCH3-212ENST00000466845 COL13A1Q5TAT6 717 aaPredicted RBP7.96□□□□□ -1.14
LRCH3-212ENST00000466845 WNT8BQ93098 351 aa7.96□□□□□ -1.14
LRCH3-212ENST00000466845 ADAM19Q9H013 955 aa7.96□□□□□ -1.14
LRCH3-212ENST00000466845 GGNBP2Q9H3C7 697 aa7.96□□□□□ -1.14
LRCH3-212ENST00000466845 POLIQ9UNA4 740 aa7.96□□□□□ -1.14
LRCH3-212ENST00000466845 ZCCHC6Q5VYS8 1495 aaKnown RBP7.95□□□□□ -1.14
LRCH3-212ENST00000466845 ICMTO60725 284 aa7.95□□□□□ -1.14
LRCH3-212ENST00000466845 ABL1P00519 1130 aa7.95□□□□□ -1.14
LRCH3-212ENST00000466845 SHISA2Q6UWI4 295 aa7.95□□□□□ -1.14
LRCH3-212ENST00000466845 SLC51AQ86UW1 340 aa7.95□□□□□ -1.14
LRCH3-212ENST00000466845 KLHL23Q8NBE8 558 aa7.95□□□□□ -1.14
LRCH3-212ENST00000466845 SNX29Q8TEQ0 813 aa7.95□□□□□ -1.14
LRCH3-212ENST00000466845 WFDC12Q8WWY7 111 aa7.95□□□□□ -1.14
LRCH3-212ENST00000466845 SEMA6BQ9H3T3 888 aa7.95□□□□□ -1.14
LRCH3-212ENST00000466845 CNTN3Q9P232 1028 aa7.95□□□□□ -1.14
LRCH3-212ENST00000466845 USP35Q9P2H5 1018 aa7.95□□□□□ -1.14
LRCH3-212ENST00000466845 TRIM33Q9UPN9 1127 aa7.95□□□□□ -1.14
LRCH3-212ENST00000466845 EDN3P14138 238 aa7.94□□□□□ -1.14
LRCH3-212ENST00000466845 CABP4P57796 275 aa7.94□□□□□ -1.14
LRCH3-212ENST00000466845 SETDB1Q15047 1291 aa7.94□□□□□ -1.14
LRCH3-212ENST00000466845 C1orf127Q8N9H9 656 aa7.94□□□□□ -1.14
LRCH3-212ENST00000466845 CITED4Q96RK1 184 aa7.94□□□□□ -1.14
LRCH3-212ENST00000466845 RASSF4Q9H2L5 321 aa7.94□□□□□ -1.14
LRCH3-212ENST00000466845 UNC13AQ9UPW8 1703 aa7.93□□□□□ -1.14
LRCH3-212ENST00000466845 LOC100996750A0A140TA64 210 aa7.93□□□□□ -1.14
LRCH3-212ENST00000466845 PHACTR2O75167 634 aa7.93□□□□□ -1.14
LRCH3-212ENST00000466845 CYP2E1P05181 493 aaPredicted RBP7.93□□□□□ -1.14
LRCH3-212ENST00000466845 GJD3Q8N144 294 aa7.93□□□□□ -1.14
LRCH3-212ENST00000466845 SSBP4Q9BWG4 385 aaPredicted RBP7.93□□□□□ -1.14
LRCH3-212ENST00000466845 KRTAP4-6Q9BYQ5 205 aa7.93□□□□□ -1.14
LRCH3-212ENST00000466845 AKTIPQ9H8T0 292 aa7.93□□□□□ -1.14
LRCH3-212ENST00000466845 FZD6O60353 706 aa7.92□□□□□ -1.14
LRCH3-212ENST00000466845 TNFRSF21O75509 655 aa7.92□□□□□ -1.14
LRCH3-212ENST00000466845 NCLP19338 710 aaKnown RBP7.92□□□□□ -1.14
LRCH3-212ENST00000466845 ATP11AP98196 1134 aa7.92□□□□□ -1.14
LRCH3-212ENST00000466845 PDE3BQ13370 1112 aa7.92□□□□□ -1.14
LRCH3-212ENST00000466845 MTMR3Q13615 1198 aa7.92□□□□□ -1.14
LRCH3-212ENST00000466845 TMEM102Q8N9M5 508 aaPredicted RBP7.92□□□□□ -1.14
LRCH3-212ENST00000466845 CCER1Q8TC90 406 aaPredicted RBP7.92□□□□□ -1.14
LRCH3-212ENST00000466845 POP1Q99575 1024 aaKnown RBP7.92□□□□□ -1.14
LRCH3-212ENST00000466845 PRDM16Q9HAZ2 1276 aa7.92□□□□□ -1.14
LRCH3-212ENST00000466845 OSGEPQ9NPF4 335 aa7.92□□□□□ -1.14
LRCH3-212ENST00000466845 DZANK1Q9NVP4 752 aa7.92□□□□□ -1.14
LRCH3-212ENST00000466845 PDE2AO00408 941 aaPredicted RBP7.91□□□□□ -1.14
LRCH3-212ENST00000466845 DYRK3O43781 588 aa7.91□□□□□ -1.14
LRCH3-212ENST00000466845 CD68P34810 354 aaPredicted RBP7.91□□□□□ -1.14
LRCH3-212ENST00000466845 GLYCTKQ8IVS8 523 aa7.91□□□□□ -1.14
LRCH3-212ENST00000466845 TP53INP1Q96A56 240 aa7.91□□□□□ -1.14
LRCH3-212ENST00000466845 LACRTQ9GZZ8 138 aa7.91□□□□□ -1.14
LRCH3-212ENST00000466845 CHRDQ9H2X0 955 aa7.91□□□□□ -1.14
LRCH3-212ENST00000466845 DCAF1Q9Y4B6 1507 aa7.9□□□□□ -1.14
LRCH3-212ENST00000466845 ARID4BQ4LE39 1312 aaPredicted RBP7.9□□□□□ -1.14
LRCH3-212ENST00000466845 F8W735 103 aaPredicted RBP7.9□□□□□ -1.14
LRCH3-212ENST00000466845 LINC01387J3KSC0 135 aa7.9□□□□□ -1.14
LRCH3-212ENST00000466845 NOS3P29474 1203 aa7.9□□□□□ -1.14
LRCH3-212ENST00000466845 IREB2P48200 963 aaKnown RBP7.9□□□□□ -1.14
LRCH3-212ENST00000466845 ARL4DP49703 201 aa7.9□□□□□ -1.14
LRCH3-212ENST00000466845 PIP4K2BP78356 416 aa7.9□□□□□ -1.14
LRCH3-212ENST00000466845 TXNDC2Q86VQ3 553 aa7.9□□□□□ -1.14
LRCH3-212ENST00000466845 SEC31BQ9NQW1 1179 aa7.9□□□□□ -1.14
LRCH3-212ENST00000466845 KANSL3Q9P2N6 904 aa7.9□□□□□ -1.14
LRCH3-212ENST00000466845 AMOTL2Q9Y2J4 779 aa7.9□□□□□ -1.14
LRCH3-212ENST00000466845 CARNS1A5YM72 827 aa7.89□□□□□ -1.15
LRCH3-212ENST00000466845 H3BRJ5 948 aa7.89□□□□□ -1.15
LRCH3-212ENST00000466845 NFKBIEO00221 500 aa7.89□□□□□ -1.15
LRCH3-212ENST00000466845 FSCN2O14926 492 aa7.89□□□□□ -1.15
LRCH3-212ENST00000466845 PPM1GO15355 546 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-212ENST00000466845 NDUFB5O43674 189 aa7.89□□□□□ -1.15
LRCH3-212ENST00000466845 MFAP1P55081 439 aaKnown RBP7.89□□□□□ -1.15
LRCH3-212ENST00000466845 TEX2Q8IWB9 1127 aa7.89□□□□□ -1.15
LRCH3-212ENST00000466845 DZIP1LQ8IYY4 767 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms