RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 CNTN3Q9P232 1028 aa8.16□□□□□ -1.1
CHMP2B-202ENST00000466696 KANSL3Q9P2N6 904 aa8.16□□□□□ -1.1
CHMP2B-202ENST00000466696 SALL4Q9UJQ4 1053 aa8.16□□□□□ -1.1
CHMP2B-202ENST00000466696 TMEM88BA6NKF7 163 aa8.15□□□□□ -1.1
CHMP2B-202ENST00000466696 CDC25BP30305 580 aa8.15□□□□□ -1.1
CHMP2B-202ENST00000466696 EIF1AXP47813 144 aaKnown RBP8.15□□□□□ -1.1
CHMP2B-202ENST00000466696 C1orf127Q8N9H9 656 aa8.15□□□□□ -1.1
CHMP2B-202ENST00000466696 CEP41Q9BYV8 373 aa8.15□□□□□ -1.1
CHMP2B-202ENST00000466696 GGNBP2Q9H3C7 697 aa8.15□□□□□ -1.1
CHMP2B-202ENST00000466696 HYAL3O43820 417 aaPredicted RBP8.14□□□□□ -1.11
CHMP2B-202ENST00000466696 FSTP19883 344 aa8.14□□□□□ -1.11
CHMP2B-202ENST00000466696 EPHA1P21709 976 aa8.14□□□□□ -1.11
CHMP2B-202ENST00000466696 MPSTP25325 297 aa8.14□□□□□ -1.11
CHMP2B-202ENST00000466696 CABP4P57796 275 aa8.14□□□□□ -1.11
CHMP2B-202ENST00000466696 ADAMTSL4Q6UY14 1074 aa8.14□□□□□ -1.11
CHMP2B-202ENST00000466696 ACAD11Q709F0 780 aa8.14□□□□□ -1.11
CHMP2B-202ENST00000466696 CARD10Q9BWT7 1032 aa8.14□□□□□ -1.11
CHMP2B-202ENST00000466696 SEC31BQ9NQW1 1179 aa8.14□□□□□ -1.11
CHMP2B-202ENST00000466696 SH2B1Q9NRF2 756 aaPredicted RBP8.14□□□□□ -1.11
CHMP2B-202ENST00000466696 MTMR7Q9Y216 660 aa8.14□□□□□ -1.11
CHMP2B-202ENST00000466696 TM4SF5O14894 197 aa8.13□□□□□ -1.11
CHMP2B-202ENST00000466696 WISP1O95388 367 aa8.13□□□□□ -1.11
CHMP2B-202ENST00000466696 DUOXA2Q1HG44 320 aa8.13□□□□□ -1.11
CHMP2B-202ENST00000466696 WNT8BQ93098 351 aa8.13□□□□□ -1.11
CHMP2B-202ENST00000466696 KCNK4Q9NYG8 393 aa8.13□□□□□ -1.11
CHMP2B-202ENST00000466696 RAXQ9Y2V3 346 aa8.13□□□□□ -1.11
CHMP2B-202ENST00000466696 H3BRJ5 948 aa8.12□□□□□ -1.11
CHMP2B-202ENST00000466696 GSC2O15499 205 aa8.12□□□□□ -1.11
CHMP2B-202ENST00000466696 DHX15O43143 795 aaKnown RBP8.12□□□□□ -1.11
CHMP2B-202ENST00000466696 PIP4K2BP78356 416 aa8.12□□□□□ -1.11
CHMP2B-202ENST00000466696 AAMPQ13685 434 aa8.12□□□□□ -1.11
CHMP2B-202ENST00000466696 UVSSAQ2YD98 709 aa8.12□□□□□ -1.11
CHMP2B-202ENST00000466696 UBL7Q96S82 380 aaPredicted RBP8.12□□□□□ -1.11
CHMP2B-202ENST00000466696 DZANK1Q9NVP4 752 aa8.12□□□□□ -1.11
CHMP2B-202ENST00000466696 PDE2AO00408 941 aaPredicted RBP8.11□□□□□ -1.11
CHMP2B-202ENST00000466696 FAM13AO94988 1023 aa8.11□□□□□ -1.11
CHMP2B-202ENST00000466696 NPR3P17342 541 aa8.11□□□□□ -1.11
CHMP2B-202ENST00000466696 USP5P45974 858 aa8.11□□□□□ -1.11
CHMP2B-202ENST00000466696 EHHADHQ08426 723 aa8.11□□□□□ -1.11
CHMP2B-202ENST00000466696 KIAA1211Q6ZU35 1233 aa8.11□□□□□ -1.11
CHMP2B-202ENST00000466696 KLHDC7BQ96G42 594 aa8.11□□□□□ -1.11
CHMP2B-202ENST00000466696 OSGEPQ9NPF4 335 aa8.11□□□□□ -1.11
CHMP2B-202ENST00000466696 POLIQ9UNA4 740 aa8.11□□□□□ -1.11
CHMP2B-202ENST00000466696 A6NHS1 94 aa8.1□□□□□ -1.11
CHMP2B-202ENST00000466696 NFKBIEO00221 500 aa8.1□□□□□ -1.11
CHMP2B-202ENST00000466696 SF3B2Q13435 895 aaKnown RBP8.1□□□□□ -1.11
CHMP2B-202ENST00000466696 MTMR3Q13615 1198 aa8.1□□□□□ -1.11
CHMP2B-202ENST00000466696 CHRDQ9H2X0 955 aa8.1□□□□□ -1.11
CHMP2B-202ENST00000466696 STOML1Q9UBI4 398 aa8.1□□□□□ -1.11
CHMP2B-202ENST00000466696 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.1□□□□□ -1.11
CHMP2B-202ENST00000466696 ACPPP15309 386 aa8.09□□□□□ -1.11
CHMP2B-202ENST00000466696 TMEM102Q8N9M5 508 aaPredicted RBP8.09□□□□□ -1.11
CHMP2B-202ENST00000466696 FOXD4L4Q8WXT5 416 aaPredicted RBP8.09□□□□□ -1.11
CHMP2B-202ENST00000466696 DDX3YO15523 660 aaKnown RBP8.08□□□□□ -1.12
CHMP2B-202ENST00000466696 ADAM11O75078 769 aa8.08□□□□□ -1.12
CHMP2B-202ENST00000466696 PHACTR2O75167 634 aa8.08□□□□□ -1.12
CHMP2B-202ENST00000466696 EDN3P14138 238 aa8.08□□□□□ -1.12
CHMP2B-202ENST00000466696 ARL4DP49703 201 aa8.08□□□□□ -1.12
CHMP2B-202ENST00000466696 FKBP4Q02790 459 aaKnown RBP eCLIP8.08□□□□□ -1.12
CHMP2B-202ENST00000466696 ARMC10Q8N2F6 343 aa8.08□□□□□ -1.12
CHMP2B-202ENST00000466696 SNX29Q8TEQ0 813 aa8.08□□□□□ -1.12
CHMP2B-202ENST00000466696 UTP4Q969X6 686 aaKnown RBP8.08□□□□□ -1.12
CHMP2B-202ENST00000466696 FAM46AQ96IP4 442 aaKnown RBP8.08□□□□□ -1.12
CHMP2B-202ENST00000466696 PSMG3-AS1Q96PY0 264 aa8.08□□□□□ -1.12
CHMP2B-202ENST00000466696 KRTAP4-8Q9BYQ9 185 aa8.08□□□□□ -1.12
CHMP2B-202ENST00000466696 TNFRSF21O75509 655 aa8.07□□□□□ -1.12
CHMP2B-202ENST00000466696 IGLV1-40P01703 118 aa8.07□□□□□ -1.12
CHMP2B-202ENST00000466696 ANKRD34AQ69YU3 496 aa8.07□□□□□ -1.12
CHMP2B-202ENST00000466696 UBASH3BQ8TF42 649 aa8.07□□□□□ -1.12
CHMP2B-202ENST00000466696 OSMRQ99650 979 aa8.07□□□□□ -1.12
CHMP2B-202ENST00000466696 C1orf115Q9H7X2 142 aa8.07□□□□□ -1.12
CHMP2B-202ENST00000466696 SOX13Q9UN79 622 aa8.07□□□□□ -1.12
CHMP2B-202ENST00000466696 EREGO14944 169 aa8.06□□□□□ -1.12
CHMP2B-202ENST00000466696 TRPA1O75762 1119 aa8.06□□□□□ -1.12
CHMP2B-202ENST00000466696 PHLDB3Q6NSJ2 640 aa8.06□□□□□ -1.12
CHMP2B-202ENST00000466696 SLC7A3Q8WY07 619 aa8.06□□□□□ -1.12
CHMP2B-202ENST00000466696 BSNDQ8WZ55 320 aa8.06□□□□□ -1.12
CHMP2B-202ENST00000466696 NXPE3Q969Y0 559 aa8.06□□□□□ -1.12
CHMP2B-202ENST00000466696 MYRFLQ96LU7 910 aa8.06□□□□□ -1.12
CHMP2B-202ENST00000466696 HHIPQ96QV1 700 aa8.06□□□□□ -1.12
CHMP2B-202ENST00000466696 RNF208Q9H0X6 261 aa8.06□□□□□ -1.12
CHMP2B-202ENST00000466696 PCMTD2Q9NV79 361 aa8.06□□□□□ -1.12
CHMP2B-202ENST00000466696 SART1O43290 800 aaKnown RBP8.05□□□□□ -1.12
CHMP2B-202ENST00000466696 NLRP12P59046 1061 aa8.05□□□□□ -1.12
CHMP2B-202ENST00000466696 C19orf57Q0VDD7 668 aa8.05□□□□□ -1.12
CHMP2B-202ENST00000466696 ZKSCAN3Q9BRR0 538 aa8.05□□□□□ -1.12
CHMP2B-202ENST00000466696 FZD6O60353 706 aa8.04□□□□□ -1.12
CHMP2B-202ENST00000466696 ABL1P00519 1130 aa8.04□□□□□ -1.12
CHMP2B-202ENST00000466696 RUSC1Q9BVN2 902 aa8.04□□□□□ -1.12
CHMP2B-202ENST00000466696 FOXD3Q9UJU5 478 aaPredicted RBP8.04□□□□□ -1.12
CHMP2B-202ENST00000466696 NFIAQ12857 509 aa8.03□□□□□ -1.12
CHMP2B-202ENST00000466696 IKBKEQ14164 716 aa8.03□□□□□ -1.12
CHMP2B-202ENST00000466696 B4GALNT3Q6L9W6 998 aa8.03□□□□□ -1.12
CHMP2B-202ENST00000466696 FDX2Q6P4F2 183 aa8.03□□□□□ -1.12
CHMP2B-202ENST00000466696 CLEC10AQ8IUN9 316 aa8.03□□□□□ -1.12
CHMP2B-202ENST00000466696 FAM20CQ8IXL6 584 aa8.03□□□□□ -1.12
CHMP2B-202ENST00000466696 GJD3Q8N144 294 aa8.03□□□□□ -1.12
CHMP2B-202ENST00000466696 BHLHE41Q9C0J9 482 aaPredicted RBP8.03□□□□□ -1.12
CHMP2B-202ENST00000466696 C7orf69Q9H7B7 122 aa8.03□□□□□ -1.12
CHMP2B-202ENST00000466696 AMOTL2Q9Y2J4 779 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms